Basic Information

Insect: Hestina assimilis
Gene Symbol: -
Assembly: GCA_016906905.1
Location: JAFDUZ010000032.1:148377-157879[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.3 5.7e+02 1.8 0.1 3 23 116 136 114 136 0.94

2 18 0.42 38 5.5 0.0 2 23 140 162 139 162 0.94

3 18 0.085 7.7 7.7 0.5 2 23 405 427 404 427 0.96

4 18 0.049 4.4 8.5 0.1 1 20 435 454 435 456 0.95

5 18 0.011 1 10.5 0.5 2 23 466 487 465 487 0.94

6 18 0.49 44 5.3 0.7 1 23 503 526 503 526 0.91

7 18 4.8 4.4e+02 2.2 3.6 1 23 535 558 535 558 0.91

8 18 0.00075 0.068 14.2 0.3 3 23 637 658 635 658 0.93

9 18 0.66 59 4.9 1.0 1 23 663 686 663 686 0.93

10 18 8.9e-05 0.008 17.1 1.2 1 23 692 714 692 714 0.96

11 18 5.7e-06 0.00051 20.9 0.8 1 23 721 743 721 743 0.98

12 18 7.7e-05 0.007 17.3 2.3 1 23 748 770 748 770 0.96

13 18 0.0014 0.12 13.4 2.5 1 23 776 798 776 798 0.99

14 18 2.4e-05 0.0022 18.9 2.7 1 23 804 826 804 826 0.96

15 18 0.0004 0.036 15.0 3.3 2 23 833 854 833 854 0.97

16 18 0.00053 0.048 14.6 0.4 2 23 862 884 861 884 0.97

17 18 0.00044 0.04 14.9 1.0 1 23 889 911 889 911 0.98

18 18 0.16 14 6.9 4.6 1 23 917 940 917 940 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.3	5.7e+02	1.8	0.1	3	23	116	136	114	136	0.94
2	18	0.42	38	5.5	0.0	2	23	140	162	139	162	0.94
3	18	0.085	7.7	7.7	0.5	2	23	405	427	404	427	0.96
4	18	0.049	4.4	8.5	0.1	1	20	435	454	435	456	0.95
5	18	0.011	1	10.5	0.5	2	23	466	487	465	487	0.94
6	18	0.49	44	5.3	0.7	1	23	503	526	503	526	0.91
7	18	4.8	4.4e+02	2.2	3.6	1	23	535	558	535	558	0.91
8	18	0.00075	0.068	14.2	0.3	3	23	637	658	635	658	0.93
9	18	0.66	59	4.9	1.0	1	23	663	686	663	686	0.93
10	18	8.9e-05	0.008	17.1	1.2	1	23	692	714	692	714	0.96
11	18	5.7e-06	0.00051	20.9	0.8	1	23	721	743	721	743	0.98
12	18	7.7e-05	0.007	17.3	2.3	1	23	748	770	748	770	0.96
13	18	0.0014	0.12	13.4	2.5	1	23	776	798	776	798	0.99
14	18	2.4e-05	0.0022	18.9	2.7	1	23	804	826	804	826	0.96
15	18	0.0004	0.036	15.0	3.3	2	23	833	854	833	854	0.97
16	18	0.00053	0.048	14.6	0.4	2	23	862	884	861	884	0.97
17	18	0.00044	0.04	14.9	1.0	1	23	889	911	889	911	0.98
18	18	0.16	14	6.9	4.6	1	23	917	940	917	940	0.97

Sequence Information

Coding Sequence: ATGTCCTCTGATGACTCGGATAATGAACCATTATCCGTTTTGGCAGCAGCTAAAAAGATCAATCCTGAAAGATTTAATGAGCCATATTCAGATAGCAATGAAGATGAACCTAAGAAAAAGAAAAAGATGGAACCGCCGTTTAAAAAACTGGGTGTTACTATAAAAATAAATCGTAAATTAAATACTATACTTCCACCTGCGGTAATCGCAAGACCCCTTGATGTATGGCTTTATCTAAAGGATTTAAACCCGACAGGTCCTTTCAGCTGTTTATTATGTTCAGATTGGTTTATAAATAGATCGAAAATGATAATGCATTATGCTCTAAATCACAAAAAAGATTTTTGTGGAATATGCAGATATTTTGTACCTGATAGACAAGCTTGGTGGAATCACGAAAAGTTCCATACTCCTTGGCCATGCTCTCAATGTGTTGAGACATTTCCATCAGAATGGATATTACGAACACATCTCACTACTGTACACAACCTGGTTCACTGCCGTCTTTGCCACTTTAGAGTAACAGCTGATGATAACTATAATTCACATTTATTCCAGAAACATAATGTAACAAATGTGTCATCTAAAAATGAAGAAAGTCTCTGGGAACTTGACTATGAAGGTGCAGATAAATTTCTCTGTTTGCTCTGTTCTAAAGCTGATAATTCAGTGACAACATTTTTCGGTCATTATATGGGTTATCATCATTTCACTCTAAAATGCTTAGCAAATATTATAGCTGGAAAAGACACACCATTTTTGGTTAATGGCGCAGAAGTTAGTGATCGTTTTGTCAATGAACAACTTAAGGGACATGTAAGGCTCGGGTACGTTGACTTACAGCCGTACAATGTTGAAAGCAAACCAGAAATAGGTTTTAATCAAGAGCAATATGATGCACCTAAACCTTCAACAGACATATTGTTAGAAATTAAACAGGAAATTAGTGATACAGAGGATCAGAAGCAAGAAGAGGAAAAAGACACAAGTGAAAAGGATGAAAATAGTCAAAATGATGAAAACAGTCAAAATGAAACAATAGATTACAAGGGTGAGGAAGATTTTGATATAACACTCACAGAGGTTATCATATTAGAAAAATGTTATTTTGACTACATTACTCAGTTACAAGTAGACATTAACTCGAAGAAAGTACCAGTGGTTTCGCGAATCGATTATGATAAGGCTAAACATGATATTTTGATGGATGTTGAATGTTCTCTCTGTAAAACAAAACTTGAAACGGCATTATCCTTTACGTCACACATGAATAAAATACACAGTATTAAAACAATACCACTATATTCGTGTCGAGTTTGTGCTACAACATTTGATACTCATAATGAACTTGCTGCTCATGTAACCGAGGAACTAGCAGATTTTGAGGACTTGTGGATTTGTCAGTTTTGTGATAAAGAGTTTAACAATAGAGAGGCAACAAGGAGTCACCTCACCGAGCATTGGGATGTTTTAGATTATGATAACTGCTTCAGTCCACATCTGGGCTTCAAGTGCAAATATTGTCCAACATTGTTTTGGAATGAAACAGACAGAGAGACCCATCAGATTAGAGTACATTTCAGCAAGCATACTGATCAGTTTTACAAATGTGAATGTTGTTCAATAACATTTGGCGATAAGGTATGGTTTATTCATCATTTTCTGGAGAAACATTTTGGACAGGATGCCCCGATGAGTCCTTATCTCCTAAAGTGCTGTATATGCTGTATCGTCTTACCAGGTGTTGAAGAAATGAGAACACATTTTGAAGAGACACATCCAGAACTTAGGAAATTGTTCTGTACTTTGGATCCCTGTCTGTATAAACCTTTAAGTCATCGGAAGACATTTAAGTTCCATGTTAAGATGATCCATGGCCCAGGAGCTAAGTCAGACAAGCCAGTAAATTGTAGCATGTGCCAAAGAGAGTTTGCCAGCCAGCGCTCTCTTAGCACGCATATGGCACAGGTGCATGGACCTGGCAAGTTTAAATGCAAACTCTGCAGAGAAGTGTTGATGACTAATGATGAGAGAAAACTTCATTATCTACTCCGTCATCCTGGTCGCCATCCTTTCGAGTGTGCTGAATGTGGCAAATCATTCCAATACAAATCGTCACTGTATATGCACAAGCAAGACCACATGCCCAACAAGCAAAGCTACACTTGCAGTTATTGTGGGAAAATATTTGCGAAGAAGGATTCGTATCGCGAGCACGTGCAGATACACGAGGGCCCCCGCCACGCGTGCTCGTACTGCCCCATGCGGTTCGTCCAGCGCTCCAACATGCTGCGTCACGAGCGGCGCCACACCGGCGAGAGGCCCTACCGCTGTGCGCACTGCCCGAGGTCCTTCGCCGATAAGGGGGCCTGCACTGCCCACTCCAGGACACACTCGAAGGATACTTCACACGCATGTTTATATTGTGGACAGACTTTTGTTCAGAAGTCGAAACTTACTTATCATGTCAGGCGACATACCGGAGAAAATCTAGAGTCGTGCACTGTTTGCTCGAAACTATTCACAAGTGCATGCTCTTTACGGGAACATATGAAAACTCACTTAGAGAAGAGAACAATTGTGAAATGTCCACTTTGTGATAAAGGCTATCAAGACGAGCGTTACATGCTACGTCACTTACGGACATCGCACACACGCTCGCAGTTCTCGTGTCCGATCTGTCACAAGCTGCTCTCAAGCGCCGCGGGACTACGTCATCACGTCCTCACCCATAGCCCGCTAAATACATTCCGGTGTAAATGCTGTCCCAAGTCTTACGCCGTCAAAAGAACGATAATGAAGCATCTGCGAAAACGTCACGGTTTAAAAGGTACAGAGATCAATATAAAAGATTATTTTGAGCGTTTGGACCCTCGAGATTGTCAATTGGCTCTAGACATTGAAACCATAGACAGTATCTTTGGACCTCCAAAGAAAAAAGTCTCAGATATATTAATTGGTGATTTTATAACATTTTCAAAGAAATTATCTGTTGCTCAAAACGTGGTGGAAAGTAAAGAGAGTGAAGTTGATTCGGAAGATGAGATAGAAAATAATGACGGCAAAGAGAGTGAAAAAGAAAGTGATATTGAAGAGAAACCAAAGATACTGAATATGAATATTAAACAAGAAATTGAAATCGAAGAAGAATTAGAGCCCACAGATTTTGTTAGCGTTAAGATTGAACCCATGGAGTATGATGAAAGCGAATAG
Protein Sequence: MSSDDSDNEPLSVLAAAKKINPERFNEPYSDSNEDEPKKKKKMEPPFKKLGVTIKINRKLNTILPPAVIARPLDVWLYLKDLNPTGPFSCLLCSDWFINRSKMIMHYALNHKKDFCGICRYFVPDRQAWWNHEKFHTPWPCSQCVETFPSEWILRTHLTTVHNLVHCRLCHFRVTADDNYNSHLFQKHNVTNVSSKNEESLWELDYEGADKFLCLLCSKADNSVTTFFGHYMGYHHFTLKCLANIIAGKDTPFLVNGAEVSDRFVNEQLKGHVRLGYVDLQPYNVESKPEIGFNQEQYDAPKPSTDILLEIKQEISDTEDQKQEEEKDTSEKDENSQNDENSQNETIDYKGEEDFDITLTEVIILEKCYFDYITQLQVDINSKKVPVVSRIDYDKAKHDILMDVECSLCKTKLETALSFTSHMNKIHSIKTIPLYSCRVCATTFDTHNELAAHVTEELADFEDLWICQFCDKEFNNREATRSHLTEHWDVLDYDNCFSPHLGFKCKYCPTLFWNETDRETHQIRVHFSKHTDQFYKCECCSITFGDKVWFIHHFLEKHFGQDAPMSPYLLKCCICCIVLPGVEEMRTHFEETHPELRKLFCTLDPCLYKPLSHRKTFKFHVKMIHGPGAKSDKPVNCSMCQREFASQRSLSTHMAQVHGPGKFKCKLCREVLMTNDERKLHYLLRHPGRHPFECAECGKSFQYKSSLYMHKQDHMPNKQSYTCSYCGKIFAKKDSYREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYRCAHCPRSFADKGACTAHSRTHSKDTSHACLYCGQTFVQKSKLTYHVRRHTGENLESCTVCSKLFTSACSLREHMKTHLEKRTIVKCPLCDKGYQDERYMLRHLRTSHTRSQFSCPICHKLLSSAAGLRHHVLTHSPLNTFRCKCCPKSYAVKRTIMKHLRKRHGLKGTEINIKDYFERLDPRDCQLALDIETIDSIFGPPKKKVSDILIGDFITFSKKLSVAQNVVESKESEVDSEDEIENNDGKESEKESDIEEKPKILNMNIKQEIEIEEELEPTDFVSVKIEPMEYDESE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00824996;
90% Identity: -
80% Identity: -