Hass025051.1
Basic Information
- Insect
- Hestina assimilis
- Gene Symbol
- -
- Assembly
- GCA_016906905.1
- Location
- JAFDUZ010000010.1:13988871-13997944[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-11 2.9e-08 33.8 0.0 4 39 176 212 173 216 0.89 2 4 2.3e-12 3.4e-09 36.8 1.1 4 39 230 265 228 268 0.94 3 4 2.5e-15 3.6e-12 46.3 0.1 2 45 283 327 282 327 0.96 4 4 3.5e-19 5.1e-16 58.6 0.0 1 42 334 376 334 379 0.95
Sequence Information
- Coding Sequence
- ATGCCTGGAACGGACACATTCCAAGTGAAATGCGAACCTGTTTCGGACGAAGACGAAAACAATTTACAATATACTAACAATTATTTCAGTGACCAGCTTTCGACATCGGACTACGTACCAATAAAATTGGAACCAACTTCGAGACCAGGTGAACATGTATCATCACAGCTTCTTCAGCATCTGGAGTGCGTGCAAGGTACGCTGGAAGAGCTGGCTCCGGCGCCCGCGGGCCCCGCCGCCACGCCCGTGTGCGACCACGTGCCCGCCCCGCCGGACGCCTCGCTCGCGACGCTCGAGCCCGCTCAGGCGCGTCCTGTGGGATCATCACTTATTAGCCGACATATTGAAATGATGAGCACCAACGAAGTTGCCGACTCCGCGGAATTCGTTCCGCTGATGTCTATCAAAGATGAGCCCGCGTCTGAAGGAGAGCAACAACATCTGAGCAGCGACGACACAAGTGACTCGAACGGTGCTCCACAGGAGTCCGTCAGTCGCGGGAGCCCTAAGAGCTGGACACAAAAGGACATGGACCAGGCGCTCGAGGCGCTACGGAAGCACCATATGAGTCTTACCAAGGCGTCGTCGTCGTTCGGCATCCCGTCGACGACGCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCGAAGCGCGACGGCGCCGCCAAGTCGTGGGGCGCGGCCGAGCTGGCGCGCGCGCTCGCCGCGCTGCGGGCCGGCGCGCTCTCCGCCAACAAGGCCAGCAAGGCCTACGGCATCCCCAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCGGCGCCCACGGCGTGGCGGCGCGCCGACCTGGCGCGCGCGCTGCACGCCATCCGCTGCGGCGCCGCCAGCGTGCAGCGCGCCGCCGCGCAGTTCGGGATCCCCACCGGCACTTTGTACGGGCGATGTAAGCGAGAAGGGATAGAGCTGTCTCGATCAAACCCGACGCCGTGGTCAGAAGACGCTATGGAAGAAGCACTAGAAGCTGTCAGAGTGGGTCAGATGTCCATCAACCAAGCGGCCATCCATTACAACTTGCCATACTCCTCTCTGTACGGTCGCTTCAAGAGATGCAAATATCAACCACTCCAGGGACAGCCTAACCAACAGTCAGAGTTACCTAAACCACCCGAAACGGAGATAACTCACGACATATACTACCAACAAATGACGCACACACACAACGGAGACGTACAGAACCCGTACATGGATATGGACACACATATACAGACATATGAACAAATGTTTTACACCCAATGTGCTTCCAGCTGA
- Protein Sequence
- MPGTDTFQVKCEPVSDEDENNLQYTNNYFSDQLSTSDYVPIKLEPTSRPGEHVSSQLLQHLECVQGTLEELAPAPAGPAATPVCDHVPAPPDASLATLEPAQARPVGSSLISRHIEMMSTNEVADSAEFVPLMSIKDEPASEGEQQHLSSDDTSDSNGAPQESVSRGSPKSWTQKDMDQALEALRKHHMSLTKASSSFGIPSTTLWQRAHRLGIDTPKRDGAAKSWGAAELARALAALRAGALSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLARALHAIRCGAASVQRAAAQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMEEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQPLQGQPNQQSELPKPPETEITHDIYYQQMTHTHNGDVQNPYMDMDTHIQTYEQMFYTQCASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984949;
- 90% Identity
- -
- 80% Identity
- -