Basic Information

Insect: Hesperia comma
Gene Symbol: -
Assembly: GCA_905404135.1
Location: FR990018.1:15446077-15455357[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0045 0.52 11.6 1.5 3 23 247 268 246 268 0.96

2 23 0.017 2 9.8 0.6 1 22 642 663 642 663 0.95

3 23 2.3 2.7e+02 3.1 0.4 1 22 705 726 705 728 0.82

4 23 0.017 1.9 9.8 0.7 3 21 739 757 737 758 0.94

5 23 0.3 35 5.9 0.1 2 23 766 788 765 788 0.89

6 23 0.0038 0.44 11.8 0.1 3 23 809 830 807 830 0.96

7 23 0.0018 0.21 12.9 3.1 1 23 836 859 836 859 0.95

8 23 0.08 9.2 7.7 0.0 1 23 886 909 886 909 0.90

9 23 0.012 1.4 10.3 3.4 1 23 914 936 914 936 0.97

10 23 0.0041 0.48 11.7 0.2 1 23 942 965 942 965 0.95

11 23 0.0015 0.17 13.1 1.3 1 23 978 1000 978 1000 0.97

12 23 0.00011 0.013 16.7 1.8 1 23 1051 1074 1051 1074 0.97

13 23 0.0027 0.31 12.3 1.6 1 23 1141 1164 1141 1164 0.96

14 23 0.00059 0.068 14.4 2.0 2 23 1189 1211 1188 1211 0.95

15 23 0.0031 0.35 12.1 0.1 2 23 1217 1239 1216 1239 0.95

16 23 0.0081 0.93 10.8 0.2 1 21 1282 1302 1282 1303 0.95

17 23 0.00079 0.091 14.0 0.6 1 23 1313 1335 1313 1335 0.93

18 23 0.00017 0.02 16.1 0.4 2 23 1426 1448 1426 1448 0.93

19 23 1.1e-07 1.3e-05 26.1 1.1 3 23 1455 1475 1454 1475 0.98

20 23 0.0022 0.26 12.6 0.1 1 23 1494 1517 1494 1517 0.95

21 23 0.04 4.6 8.6 0.0 1 23 1544 1566 1544 1566 0.98

22 23 0.018 2 9.8 0.6 1 23 1572 1595 1572 1595 0.95

23 23 4.1e-05 0.0047 18.0 0.3 1 23 1603 1626 1603 1626 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0045	0.52	11.6	1.5	3	23	247	268	246	268	0.96
2	23	0.017	2	9.8	0.6	1	22	642	663	642	663	0.95
3	23	2.3	2.7e+02	3.1	0.4	1	22	705	726	705	728	0.82
4	23	0.017	1.9	9.8	0.7	3	21	739	757	737	758	0.94
5	23	0.3	35	5.9	0.1	2	23	766	788	765	788	0.89
6	23	0.0038	0.44	11.8	0.1	3	23	809	830	807	830	0.96
7	23	0.0018	0.21	12.9	3.1	1	23	836	859	836	859	0.95
8	23	0.08	9.2	7.7	0.0	1	23	886	909	886	909	0.90
9	23	0.012	1.4	10.3	3.4	1	23	914	936	914	936	0.97
10	23	0.0041	0.48	11.7	0.2	1	23	942	965	942	965	0.95
11	23	0.0015	0.17	13.1	1.3	1	23	978	1000	978	1000	0.97
12	23	0.00011	0.013	16.7	1.8	1	23	1051	1074	1051	1074	0.97
13	23	0.0027	0.31	12.3	1.6	1	23	1141	1164	1141	1164	0.96
14	23	0.00059	0.068	14.4	2.0	2	23	1189	1211	1188	1211	0.95
15	23	0.0031	0.35	12.1	0.1	2	23	1217	1239	1216	1239	0.95
16	23	0.0081	0.93	10.8	0.2	1	21	1282	1302	1282	1303	0.95
17	23	0.00079	0.091	14.0	0.6	1	23	1313	1335	1313	1335	0.93
18	23	0.00017	0.02	16.1	0.4	2	23	1426	1448	1426	1448	0.93
19	23	1.1e-07	1.3e-05	26.1	1.1	3	23	1455	1475	1454	1475	0.98
20	23	0.0022	0.26	12.6	0.1	1	23	1494	1517	1494	1517	0.95
21	23	0.04	4.6	8.6	0.0	1	23	1544	1566	1544	1566	0.98
22	23	0.018	2	9.8	0.6	1	23	1572	1595	1572	1595	0.95
23	23	4.1e-05	0.0047	18.0	0.3	1	23	1603	1626	1603	1626	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGGCCTCGCATCAAAAATAAGGGACTGCGTTTCCGTACAGATAACAGAGAATGACGACCTGCCAAGTAATGTCTGCAGGAAATGCGTGGACAATGTCAATAACTGGCATATATTTAAGGAAGTATGTGAAAGGACACAAAACAAGCTACAGGCTCTGAGTAATAAAGATGGCAGCCTACTAGAAGAGGTTAAAGTTAAAAATGAGCCATTGTCAGATGGGGCCTATGATGATGGAGTGGTTATTGATGGCTCCTACCCTGATAGTGAGAGTGGTGGTGTGACAAGTAAATTGCAACCAGAAGGGCCACCGATCTTGGCATCATTGGGGCTCACACCGAGGAGTGATAAGAAATATGTAGATCCTCGAATGGATTGGCATCGGGTCCATACAATAATGCGAATGGTTCAAGATGATGAAGCCATTGATTCACTACAGGCTACAGAAGAAAGTGATGTGGGCGCTGACAGCGATAAAGATGAGGAGGAAGAAGAAGACGATGAAGAGATGAATGATTCTCAAACTTATCCACCAATTGTGAACGTCCCAAACATGCCAGAAGTTTCCATCACGGTCATGCGCCCCACAGGTGAAACTCTTCATGCACGTCAAGGTATCCAACAACTTGCATCTAAAGACTGTCTCGTTTGCGGTCGATCGTACCGGTACTCTCATAATGCTAGACGCCACGAACTCACATCGCACGGTTTCGATAGATACACAAATAAAACAACCCACAAGAAAACCGCATCGCACCTACAACCAAAACTTAGGCCTAATCCTTTTAATCCCAAAGCGCGGCTGATGCCTAACCCTATTAGTCATAAAATGCAACTTCTCCCGAAGAACATTCCGACCAAAGCTGTTCCACAAAAAACAATCACCCCAGCAAAACCAATACCAATTAAGACCATAAAACCACCTCAAAATAATTTGCCATATCCATTGCGTATTAAAGCATTGAAAGATTTACAAATTAAAAAGAAGGAACCTCAAATATTGAAAACACTTCTAACAACTAAGCCAGAAGTATTGATCTCGGAACCAGAAATAATTAATTCTGGTCCAGAAAGCCCTGAAACTTTAATATCAGAACCAGAAATAGCGTCGTTCCAAGTAGAGGCTATTTTGTCTGAGCCGGATGGTTTTGTAAACCAACACGATGAGGACGTAGATTCAAATCAATTTAAGTCAAACAACCATGGTCAGAACTATGACACGGTCGATATGGATACTGACAATGAAATTGAAATCGCTCGCCAGCAAGAAAATGAGTGTGAAGATGACCAGGAAAATGAAGCAGAAAACGGTAATGATCAAGAAAACGCAACATCTCACAGTGATAATGGGAAACAAAATCAGGAAGGAAGTGATATTAAGACTGAGGGTGATTTAGAAAACAATGATATGAATAAAGATGACGAACAAACAAAAGAAGAAGAAGAAGAAAGAGAAAATGATGACAACACCCCTCAAGATGAAAATTATGAAGATGATGATGATGAACTACCGCCAGTGAGTCTGGCGCCTGTGGTAGAAATTAATGAAGATATGCAAAATAATTCTTACAATAGTGAAGTAAATGAAGAGGAAGAAGATTTTGAATCAGCAGATGCTAATGATACAGTAGACGGTGATGAAAATATCAAAGAGCTTGATCCAAATAAAATCTATGTTACAAAAATGCAGCGAGATTTCATCGTCAAATATCGTGACATTATTGAACAGATTAATACTAAAAAATGCCTTTGTTGTAAAAGGGAACATCCACGTAGAAAAGCAGTCATTCAACATTTACAAAAGAATGGCCACAAAGTACCAAAACATACCTGTTATAATTGCGTAATAACTTTCAGTCATATTGGAGCGCTACTCAGTCACATGAGATCAAATACGTGTACTGATTTATGGAAAATAATATACAATGAGAATGGTATCACAGATGACCTCGTCTTGGAAGATGAACCGAAAGATCCTAAAGTTCAGTACAAAGACATATTTAATGCCAGATCCTATTCTTGTAAACTGTGTCCTGCCAAATTCCAGTTGAAGCAATTTATAATGAAACATGTTTTGGATGTTCATGAAGATAATCAATCCAAAGTACATTTAGCTTGTGTCCACTGCGGATCGAGATTTAAAGATACAAAGTTGTGGAAAAAACACATCCGAAATGGCGAATGCACTGTGTATATTTCGTGTGACTTATGCTCAGAAAAGTTTGTCAATATGCAAGACTTTAACGATCATGCCTTAGCGGTGCACGCTGGTAACTTTGATTTGAACGATAGCCATAGCAAATGTGTCGATGGTCGACCTACTGATTGTCCCATTTGCGGCAAGAAGAACAGCAGCTACCCTAATTTGGTAAAACACTTGAAGATTATTCATAATGAAGAAACTCCTCATTACTGTCAGCATTGCGATTCCAAATTCGAACAAGCTGCCGATCTTAACAAGCATATTTACATGCAGCACTCCGATAGGTCTCTAGGTGTTCAGATTTCAACAGAACCTGATATGTCCCTTGTCAAAGAAGAAGCGGAAGAATATCATTATTCCTGCACAGAATGCAATGCCATTTTTGAGACTGTGGACGCTTGGACGGATCATCAAGTAGCAGAACACAATCAAGTCGCTCATCATTGTGATCAATGCGAAAAGAAATTTTTGAGGCCATCTGAGCTAGCCGAACATAAAAATACACATTTGCGTGTGAAATTTTATCCTTGTAACATTTGTTCTAATTCGTACAGTACTCCTCAAAAGCTCTCCGAACATGTTCAACAGGTTCACCCTGGAACAGGAGGATATAACTCCCTGGATGCTGAATTCTTCTGCGATATTTGTATCAGATCATTCAAAAGCCGCCAGGCATATTCTAATCATATGCGTATTCATTCTAAAGTACCAACTACTAATAGGAAGCCTGGAGAAGCAAACCCGAAAGGATTCCCTCCTCAAATAATTGGAAAGCCGATACGACACTTTTCTATGGTCCAGCCAAGTTTCCTATCATTCAAGCCAAATTGTAATGTTCCTAACGCACCCTATTCTTGTGATATATGTGGCAAAGGTTTTATGCATAAGAAAAATATATGGAAACATAAGAAAGTTCTGCATGCTGATTTGATAAACGATAGAAACGACAGCGAAGAGAATACTATGGCGGCATCCACAGAAGAAGATGATTATAATATGGATGAGAATGGCGCTATGTTGTCGACGCCGCAGTTCAACAGTTTCAACTTTACAAATATGACTAACAGTAACAATGTACCGCAACAACAGCCTCAGCCCCCGGCACAAGATCCCATGCCATATTCTTGTGAGTTGTGCTACAAACGATTCCCGCTAAGAACAAGTTTGTGGAAGCATAAACGCGCCAAGCATGGAATTATTAACGCCAGTGCTATCGGTACTCCCGACTCTCAGGGAGCGCAGAATGAATCGTCAGGTCGGTCGAGTTGTACCATATGTAAAATAAGTTTCTCTGACAAGAAGTCCTACTATCGTCATAGGAAAAATGTCCATAAATCTACCGTACAGATGTGCAAGATTTGCGGTAAACCGCTTAGTTCCACGGTCGAGCTTTATGAACATTTGCGGGCTGCTCATGCACAGGAATTGCTGGGCTATAATGCTAGTCAGGGACCTAGCAAGCAAGAAATAGGACAAGAAATGGAACCCGATTATGAACAAGATCAGGATTCAATGGATCCTAACGCTGAGTATCAGGCACGATATCCGTGTGACACGTGCGGAAAACAGTTCGTAGGACTTCTCGCATTGCAGAATCATCAATGTCTTAATCAGATGCAATCCCAGCCGCAAACTTTTGACTGCGAGATTTGTCACAAGAGTTACACATCGATCGCGGCGCTTAAAAGCCACCGTGGTTGGCATTTACGTTCCCCCGACGGTAAAGCCGCTGCCAATAACTCCGGTCTTTGGATGCCGCAACACAAAGTCACAAGCAAAGTGAGTAAACATGAAGTTGTCGATGCTTCCCAACTGGCCAAAGTTCAACATACAACTCCGGTGAGCATAGTTGCGAAACGAAGGTTACCGCCGGAAGTGGAAGTGACCGTGGTTAATCCAAACAAGAAATTGCGATCGGATGATTCAGTAGAAATGGATCAGCAAAATAATTCATCCTCGGGAATAGACGATAGGTATTGTAACTTATGTGACAAGGAATTCACGAAACGGGCTGCGTATCAACGTCACATGGACGAGGTCCATCAGCCTAACTCTGTCTTCTGTCCGGTTTGCGACAAGAGTTTCACAAGGAAGTCGACGTTGATTGTCCATATGAAAAAGCACTACGACGGCGGTGAAGGTAGTTCTACGGGAACTTGTCAAATGGATGACGACGCTCATGTGTGCGATGTTTGTGAAATGCCGTTCGAAACTGCAAACGAGTTGAATGCTCATCGCACGGTACAACATGGGGACGGGGATGGGGACGGTGAGGAAACTGGTGAGTCCGATGATGATGGAGTGGGAAATGTCCAGCAGCCAGGAGAATTCACCTGTAGCCAGTGTGGTGACGGCGTAGCCACCCCGCGTGATCTGATCGCACATCGCGCGATGCACGCGACCCCGACTAAGTTCTTCTGCAACATTTGCAAAGTATACTTCGCCCGAGCTCTCGATCTTTCGTCGCACACCAGAGCGAGACATTCGGACAACGACAAAGTATGCTTCCCTTGTGCCATGTGCGACCGTTCTTATATGAATAAGAAGAGTTTGCAACGTCATATTGAAATGGCTCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPGLASKIRDCVSVQITENDDLPSNVCRKCVDNVNNWHIFKEVCERTQNKLQALSNKDGSLLEEVKVKNEPLSDGAYDDGVVIDGSYPDSESGGVTSKLQPEGPPILASLGLTPRSDKKYVDPRMDWHRVHTIMRMVQDDEAIDSLQATEESDVGADSDKDEEEEEDDEEMNDSQTYPPIVNVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTSHGFDRYTNKTTHKKTASHLQPKLRPNPFNPKARLMPNPISHKMQLLPKNIPTKAVPQKTITPAKPIPIKTIKPPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLISEPEIINSGPESPETLISEPEIASFQVEAILSEPDGFVNQHDEDVDSNQFKSNNHGQNYDTVDMDTDNEIEIARQQENECEDDQENEAENGNDQENATSHSDNGKQNQEGSDIKTEGDLENNDMNKDDEQTKEEEEERENDDNTPQDENYEDDDDELPPVSLAPVVEINEDMQNNSYNSEVNEEEEDFESADANDTVDGDENIKELDPNKIYVTKMQRDFIVKYRDIIEQINTKKCLCCKREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFSHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDPKVQYKDIFNARSYSCKLCPAKFQLKQFIMKHVLDVHEDNQSKVHLACVHCGSRFKDTKLWKKHIRNGECTVYISCDLCSEKFVNMQDFNDHALAVHAGNFDLNDSHSKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEETPHYCQHCDSKFEQAADLNKHIYMQHSDRSLGVQISTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNICSNSYSTPQKLSEHVQQVHPGTGGYNSLDAEFFCDICIRSFKSRQAYSNHMRIHSKVPTTNRKPGEANPKGFPPQIIGKPIRHFSMVQPSFLSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLINDRNDSEENTMAASTEEDDYNMDENGAMLSTPQFNSFNFTNMTNSNNVPQQQPQPPAQDPMPYSCELCYKRFPLRTSLWKHKRAKHGIINASAIGTPDSQGAQNESSGRSSCTICKISFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTVELYEHLRAAHAQELLGYNASQGPSKQEIGQEMEPDYEQDQDSMDPNAEYQARYPCDTCGKQFVGLLALQNHQCLNQMQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDASQLAKVQHTTPVSIVAKRRLPPEVEVTVVNPNKKLRSDDSVEMDQQNNSSSGIDDRYCNLCDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYDGGEGSSTGTCQMDDDAHVCDVCEMPFETANELNAHRTVQHGDGDGDGEETGESDDDGVGNVQQPGEFTCSQCGDGVATPRDLIAHRAMHATPTKFFCNICKVYFARALDLSSHTRARHSDNDKVCFPCAMCDRSYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00277537;
90% Identity: iTF_00167070;
80% Identity: -