Basic Information

Insect: Herminia tarsipennalis
Gene Symbol: -
Assembly: GCA_945859575.2
Location: OX243840.1:19905165-19913779[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0065 0.68 11.5 1.1 3 23 753 774 752 774 0.96

2 23 0.24 25 6.6 0.3 1 22 1156 1177 1156 1177 0.95

3 23 7.7 8e+02 1.9 0.2 1 22 1219 1240 1219 1242 0.82

4 23 0.0025 0.26 12.9 2.1 3 22 1253 1272 1253 1272 0.96

5 23 1.6 1.6e+02 4.0 0.0 3 23 1281 1302 1279 1302 0.89

6 23 0.021 2.1 10.0 0.2 3 23 1322 1343 1320 1343 0.96

7 23 0.011 1.2 10.8 3.5 1 23 1349 1372 1349 1372 0.95

8 23 0.15 15 7.3 0.0 1 23 1398 1421 1398 1421 0.90

9 23 0.0064 0.67 11.6 3.5 1 23 1426 1448 1426 1448 0.97

10 23 0.096 10 7.9 0.2 1 23 1454 1477 1454 1477 0.95

11 23 0.0027 0.28 12.7 1.3 1 23 1490 1512 1490 1512 0.97

12 23 0.00021 0.022 16.2 1.8 1 23 1568 1591 1568 1591 0.97

13 23 0.0099 1 11.0 1.1 1 23 1651 1674 1651 1674 0.96

14 23 0.0028 0.29 12.7 2.1 2 23 1701 1723 1700 1723 0.95

15 23 0.1 11 7.8 0.1 2 23 1729 1751 1728 1751 0.93

16 23 0.012 1.2 10.7 0.2 1 21 1795 1815 1795 1816 0.95

17 23 0.00049 0.051 15.1 1.0 1 23 1826 1848 1826 1848 0.93

18 23 0.00013 0.014 16.9 0.3 2 23 1938 1960 1938 1960 0.93

19 23 4.6e-07 4.8e-05 24.6 1.4 3 23 1967 1987 1966 1987 0.98

20 23 0.017 1.8 10.2 0.6 1 23 2006 2028 2006 2029 0.94

21 23 0.14 15 7.3 0.0 1 23 2053 2075 2053 2075 0.97

22 23 0.032 3.4 9.4 0.6 1 23 2081 2104 2081 2104 0.95

23 23 0.0003 0.031 15.7 0.4 1 23 2112 2135 2112 2135 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0065	0.68	11.5	1.1	3	23	753	774	752	774	0.96
2	23	0.24	25	6.6	0.3	1	22	1156	1177	1156	1177	0.95
3	23	7.7	8e+02	1.9	0.2	1	22	1219	1240	1219	1242	0.82
4	23	0.0025	0.26	12.9	2.1	3	22	1253	1272	1253	1272	0.96
5	23	1.6	1.6e+02	4.0	0.0	3	23	1281	1302	1279	1302	0.89
6	23	0.021	2.1	10.0	0.2	3	23	1322	1343	1320	1343	0.96
7	23	0.011	1.2	10.8	3.5	1	23	1349	1372	1349	1372	0.95
8	23	0.15	15	7.3	0.0	1	23	1398	1421	1398	1421	0.90
9	23	0.0064	0.67	11.6	3.5	1	23	1426	1448	1426	1448	0.97
10	23	0.096	10	7.9	0.2	1	23	1454	1477	1454	1477	0.95
11	23	0.0027	0.28	12.7	1.3	1	23	1490	1512	1490	1512	0.97
12	23	0.00021	0.022	16.2	1.8	1	23	1568	1591	1568	1591	0.97
13	23	0.0099	1	11.0	1.1	1	23	1651	1674	1651	1674	0.96
14	23	0.0028	0.29	12.7	2.1	2	23	1701	1723	1700	1723	0.95
15	23	0.1	11	7.8	0.1	2	23	1729	1751	1728	1751	0.93
16	23	0.012	1.2	10.7	0.2	1	21	1795	1815	1795	1816	0.95
17	23	0.00049	0.051	15.1	1.0	1	23	1826	1848	1826	1848	0.93
18	23	0.00013	0.014	16.9	0.3	2	23	1938	1960	1938	1960	0.93
19	23	4.6e-07	4.8e-05	24.6	1.4	3	23	1967	1987	1966	1987	0.98
20	23	0.017	1.8	10.2	0.6	1	23	2006	2028	2006	2029	0.94
21	23	0.14	15	7.3	0.0	1	23	2053	2075	2053	2075	0.97
22	23	0.032	3.4	9.4	0.6	1	23	2081	2104	2081	2104	0.95
23	23	0.0003	0.031	15.7	0.4	1	23	2112	2135	2112	2135	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTACCGTCCTCGCTTCGAAAATCAAGGATTGCGTGGCTGTACAGATAAATGAAAATGACGACCTGCCCACAAATGTCTGCAGGAAATGTATGGACAATGTCAATAATTGGCATATATTTAAAAATGTATGTGAAAGGACACAAAACAAACTACAGTCTCTGATTAGTAAAGATGGCAGCCTACTAGAAGAGGTGAAAATAAAGAGTGAGCCATTGTCTGATGAGGCTTATGATGATGGAGTTGTCATTGAAGGGTCATATCCTGATAAAGAGAATGCCAGCGTGGCAAACAAAGTTCAGCCTGAAGGCCCCCCAATTTTGGCGTCATTGGGGCTCACACCAAGGAGTGATAAGAAGTATGTGGATCCTCGAATGGATTGGCATCGGGTCCATGCCATCTTGGACATGGTTCAAGAGAATGAAGTGATTGACTCACTACAGTCAAGGGAAGAGTGTGATGTTTTACAACACTCCGATCATGACTCAGACACAGACGCTGAACTTCAACCAGACATTGAAGATGACTATGTTGATTGCAAAAATGGTTACATTTGCAAAAATAAAAAAGTCATATCAAAACATCCAAAAATATCGCCATCTATGAACAATTTGAAAATGAAAGAAGCGCTCCAACTCAGAAAACGAAAATTGGACCTCCCCAAACAACGTTGTCTGCGACCTAAAAATGCTTGGCAGTTGTTATTCACTGATGACCTACTAGAATTGATTGTCACCTCAACTAATGAAAATATTGTGAAGAATGGAATTAATAACTCTGTTGCAACCAATGTTAGTGAAATAAAAACGCTTATCGGCATTTTGTATTTGCACGGCATAATGCGGCCGACTTACGAGAAGTGTACTGACCTTTGGAGTGGCGAATTTGGTATACCTTGTATTAGAAATTCTATGAAATATGAAAGGTTTAAATTTCTGCTACAAAACATTAGTTTTGATAAAGAGGACGACAACAGCATTATTCAGTTCGATATTATGAAACGTATGCGTAAGGTATTTGAAATCTTCGCCATGAATTGCAGAACAGCTCACGAGATCGAGAATATTGCGGTTATTGATGAGATCATCGTGCCAGTTTACGGACCTTGCCCATTTCGATATGATATTGATAAGAAACCGCTGAAGCGCGGCATAAAAATGGTATTGCTCGTCGACTCATCTACATTCTATATAAGTAATTTAGATGTGATTACTGACCCCTACTTCAGTGCCGAAGAGATAACGAAGAAGTTAGTTCAACATTTGGCTGGTACAGGCAGAACTATTGTAATGGATAGTTGGTATACTTCTTCAGCATTGATGGAACGTCTAAGCAATGATTACCAACTATTTACTATAGCAGCATTAAGTCCAAACAATGTTGGGATTCCACCATTGTTCCTTTCTCAGTATAGAAAGCGAAGAACATTCATGTCTGGGTTTGTTGATAATGATGTTTCACTCACATCATATGTGAATTCTGATTTGAAAGCAATCAATGTACTAACGAACGAGCCCAGGTATTACAGAAAAGGTCATGTTAATCAAACCACAGTTGTATCTGTGTATAAAAAGAATCAGTCTGCTGTAGAAGTGGTTGATGTTATTATGAACTATTACACTACCATGCAGCATACAAATGACTGGACGCTATCATTATTCTTTGCATTATTAAATATAGCTTCCATCAATGCCCAGGTTGTCTGGAGTTCTCAAAATACGAATGTGGTGCAGAGGCGAACATTCATAAAAGAGTTGGCTTTGAGTTTATTGGTGCCTGAGGAAATAATGTCAGTATCTGCTATAATATTAGATGATATACGGCTAGCCAGGAGACAGAATTTGTCCCTACTGCAAGAAATTGTCCATCCATATTACAAGAATAGGAGGCGATGTAGGATTTGTGTCCAGACAACGAAACGAGATAGGAGGACAAAAGCGTTTTGTGTCAAATGTGGCCAACCTATTTGTAAAGAACATTCTGTTAATGGAGTGGAAAGTGAGAAAGAGGAAGAAGAAGAGGAGGACGACGAAGAGATGAATGAACCTACTCAACCATTCCCCAAAATGCCCCATATGCCTGAAGTATCTATTACGGTGATGAGGCCCACCGGTGAAACTCTTCACGCCCGACAAGGGATTCACCAACTCGCGTCAAAGGATTGCCTCGTCTGCGGCCGCACTTACAGATACTCCCACAATGCCCGTCGGCATGAACTCACCGCTCACAGTTTCGACAGGTACACAAACAAAATTACTCAGAAAAAATCTCATAGTCACCGCACACCTAAACTGAGACCGAACCCCTTCAACCCTAAAGCACGGTTGATGCCAAATCCTATTAGTCATAAGATGCAATTCATGTCCAAAAATATCCCAACGAAAATAGTGCCTATAAACAAAGTTATAACGCCTCAAAAGCCCATACCAATAAAATCAGCGAAGGCGTCACAGAACAATCTGCCTTATCCTCTTCGTATCAAAGCCCTCAAAGACTTACAAATAAAGAAAAAAGAACCTCAAATTTTAAAGACATTGTTGACTTCAAAACCTGAAGTTCTAGTTTCCGAACCTGAGATAATAAACTCTGGACCCGAAAGTCCCGAGACACTAATATCTGAGCCTGAAATTGCGTCGTTCCAAGTAGAAGCTATACTCTCTGAACCTGATGCGGATTGCTATGATCAAAATCAGGGCGACGAAGAAGTTGATGGAGCTATGCATAATAACCAAAGTCAAAATTATGATACAGTTGATATGAATTCTGAAAACGAAATCGAAATTGCTCGTCAACAAGGTGATGACCTTGAAGGAGAAGAGCAAGTTGATGGTGATGAGCAAATAGACCAGGATGATGATAATATGGACGGTGGTCAGAGTGACAATGATCAAGATGTGGTCGATGATACTGCGGAAAGTCAAGAAAATATGGAAATGGATGATGGTGTTGACATCAAGGCAGAGCATGACACAAAGGACAGTGCGGAAGGTCAAGAGGCAGTAGAGCATGATGGCATTGAAATGAATAATGACGAGAACGACGAAGATGACGATGACCTTCCGATATCGATACAGCCAGTCGTTGAAATAAACGAAGACTTGCAAGCTACTTCGTTTAACAACGAAGCACCCTTAGAGGACGAAGAAATTGATGAGACCGCCGACCCTAACGAGACTGTCGAAGAAGAAGAGGTCAAAGAACTCGATCCTGACAAAACTTACGTCACCAAAACGCAACGTGACTTTATTCAGAAGTATCGTGACATTATACAGCAGATCAACACGAAACGTTGTTTGTGTTGCGACAGAGAACATCCGCGAAGGAAAGCTGTTATACAGCACTTGCAAAAAAATGGACACAAGGTTCCCAAACATACTTGTTATAACTGTGTAATCACATTTGGTCATATTGGCGCTCTACTCAGTCATATGAGATCAAACTCTTGCACGAATTTATGGAAGATTATATACAACGAAAATGGTATTACTGATGACTTGGTTTTAGAGGACGAACCTAAGGAGGTCAAGGTTCAGTATAAAGATATTTTCAATGCTAGATCCTATGCTTGCAAACTTTGTCCTGCTAAATTCCAGTTAAAACAGTTCATAATGAAACACGTTTTAGATGCACATGAAGATGGACAGTCACGAGTTCCCCTTGGCTGTGTGCACTGTCGTGCAAGGTTCAAAGATAAGAGCTTACTTAAAAAACATATTCGTAAAGGTGATTGCACAGTTTATGTAGCTTGTGACTTGTGCCCAGAACAATTTATCAGTATGCAGGATTTCAATGATCACGCTTTAGCTGTTCATGCTGGAAGTTTTGAGTCAGATAGTCAGAGCAAATGTGTTGACGGCCGTCCTACGGACTGCCCGTTGTGCGGAAAGAAAAATAGCAGCTATCCGAATTTAGTAAAACATTTGAAAATTATACACAGTGAGGAAAAGCCTCACTACTGCCAGCATTGCGATTCTAAATTCGAACAAACTGCTGATCTCAACAAACACATTTACATGGAGCATTCTGACAGGACTTTAGGCATGCAGAACAATGAACCGGATATGTCCATTGTGAAGGAAGAGGCGGAAGAATATCATTATTCTTGCACTGAATGCAATGCTATATTTGAAACTGTTGACGCATGGACCGACCATCAAGTGGCTGAACACAATCAAGTGGCTCACCACTGCGATCAGTGCGATAAAAAATTCTTACGTCCTTCTGAACTTGCGGAACATAAAAACACTCATTTGAGAGTTAAATTTTACCCTTGTAGCGTTTGTGCTAACTCTTATAGTACCCCTCAAAAACTGTCTGAACATGTGCAACAGTCCCATCCCGGCATTGGAGCCCTTGCTGCAGCAGATTCAGAATTTTTCTGCGATATCTGTATTAGGTCTTTCAAAAGTCGCCAAGCGTATTCAAATCATATGCGTATACACGCTAAGGTACCTACTACTAACAGAAAACCTGGTGATACTACTACTACATCAACTAATAAAGGATTTTCACCTTCCATCATCGGAAAACCTATTAAGCAGGTATACCCGATGGTACAACCTGGTTTTGTTGCTTTCAAACCACATTACAATATTCCTAATGCCCCATATTCGTGTGACATTTGTGGTAAAGGATTTATGCATAAGAAAAATATATGGAAACACAAGAAAGTTTTGCATGCCGATATATTGAATGAAAGAAACGACAGTGAGGAGAATACTATGCAGGCGTCTACCGAAGAAGACGAATTCAATCCAGATGAAAACGGCGCTGTTCTCTCTACCCCACAATTTAATAGTTTCAACTTCGGCAACTTTGCCAACAATGTCCAACAGACGCAACAGGAAACAATGCCGTATTCGTGTGAATTGTGTCTTAAACGGTTCCCGCTTAGAACTAGTCTGTGGAAACATAAACGTGCTAAACACGGAATCGTTAATCCTAACTCCAGTACCAGTAATGACACACAGACACCGTCGGCCAGTGGTGAGGGCAGTAGTAGATCTAGTTGTACAATATGTAGGATCACATTTTCTGATAAGAAATCTTATTATCGCCATCGAAAAAATGTTCACAAATCCACTGTTCAAATGTGCAAAATATGTGGCAAACCGCTCAATTCGACTCTGGAATTATATGAACATTTGAAAGCTGCTCACGCTCGGGAATTGTTAGGCTATAACGCAAATCAAGGTTCCAGTAAATCTCAAGAAGTTGCACAAGATATGGATCCTGATTATGAGAACGACCAAGAAGCTGCGGATCCCAGCGTCGATTATCAGGCTCGCTACCCATGTGACACTTGTGGCAAACAATTCGTCGGTTTGTTAGCATTGCAAAATCATCAGTGCATTAATCAAGTTCCTCCACAACCACAAACTTTCGATTGTGAAATCTGTCACAAAAGTTACACGTCAATTTCGGCGCTAAAGAGTCATCGCGGTTGGCATTTACGTTCACCTGACGGAAAAGCAGCTGCAAACAATAGCGGGCTTTGGATGCCGCAGCACAAAGTTACAAGTAAAATAAGTAAACATGAAGTGATCGATCCCTCACAACTTGCTAAAGTTACTCACTCGAGTCCTGCTGCTGCAGTAACGGCCAAAAGAAGACTGCCACCAGAGGTCGAGGTCACGGTTGTTAATCCAAATAAGAAAATGCGTTCTGATGATTCAGTTGAATTGGAACAACAAAATTCTAGCTCAGCCGAGGACAGGTACTGCACAATTTGCGACAAGGAGTTTACAAAACGAGCGGCGTATCAGCGCCATATGGACGAGGTCCATCAACCCAACTCAGTGTTTTGTCCTGTTTGTGATAAAAGCTTCACGAGAAAATCTACATTATTAATTCATATGAAGAAACATTATGAGGGTGGTGAAGGTAGTTCAAGCATGGTTAGTCAAGTTGAAGAAGACATGCATACATGCGAATTATGTGGAGCGCAGTATGACGATGAAGAAGCTCTTAGAGCGCACAGAGTGAGGCATCACGGGGAAGAAGAGTCTGATGAAGACGATGATGGCGACGACGGCAACGTGCCAATTCCTCCTCCGGGAGAGTTTACTTGCGGGCAGTGCGGAGATGGTGTAGCCACACCAAGGGACCTGATCGCTCACCGAACCATGCACGCAACACCCACCAAATTTTTCTGTAATATATGCAAGGTATACTTCGCGAGAGCTCTCGATCTCTCTTCCCACACTAGGGCTAGACACGCAGACAATGACAAGGTATTCTTTCCTTGTGCCATGTGCGACAGGTTCTACATGAACAAGAAGAGTTTGCAGCGGCACATTGAGATGGCTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPTVLASKIKDCVAVQINENDDLPTNVCRKCMDNVNNWHIFKNVCERTQNKLQSLISKDGSLLEEVKIKSEPLSDEAYDDGVVIEGSYPDKENASVANKVQPEGPPILASLGLTPRSDKKYVDPRMDWHRVHAILDMVQENEVIDSLQSREECDVLQHSDHDSDTDAELQPDIEDDYVDCKNGYICKNKKVISKHPKISPSMNNLKMKEALQLRKRKLDLPKQRCLRPKNAWQLLFTDDLLELIVTSTNENIVKNGINNSVATNVSEIKTLIGILYLHGIMRPTYEKCTDLWSGEFGIPCIRNSMKYERFKFLLQNISFDKEDDNSIIQFDIMKRMRKVFEIFAMNCRTAHEIENIAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYISNLDVITDPYFSAEEITKKLVQHLAGTGRTIVMDSWYTSSALMERLSNDYQLFTIAALSPNNVGIPPLFLSQYRKRRTFMSGFVDNDVSLTSYVNSDLKAINVLTNEPRYYRKGHVNQTTVVSVYKKNQSAVEVVDVIMNYYTTMQHTNDWTLSLFFALLNIASINAQVVWSSQNTNVVQRRTFIKELALSLLVPEEIMSVSAIILDDIRLARRQNLSLLQEIVHPYYKNRRRCRICVQTTKRDRRTKAFCVKCGQPICKEHSVNGVESEKEEEEEEDDEEMNEPTQPFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITQKKSHSHRTPKLRPNPFNPKARLMPNPISHKMQFMSKNIPTKIVPINKVITPQKPIPIKSAKASQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDADCYDQNQGDEEVDGAMHNNQSQNYDTVDMNSENEIEIARQQGDDLEGEEQVDGDEQIDQDDDNMDGGQSDNDQDVVDDTAESQENMEMDDGVDIKAEHDTKDSAEGQEAVEHDGIEMNNDENDEDDDDLPISIQPVVEINEDLQATSFNNEAPLEDEEIDETADPNETVEEEEVKELDPDKTYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDAHEDGQSRVPLGCVHCRARFKDKSLLKKHIRKGDCTVYVACDLCPEQFISMQDFNDHALAVHAGSFESDSQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQTADLNKHIYMEHSDRTLGMQNNEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSEHVQQSHPGIGALAAADSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDTTTTSTNKGFSPSIIGKPIKQVYPMVQPGFVAFKPHYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNERNDSEENTMQASTEEDEFNPDENGAVLSTPQFNSFNFGNFANNVQQTQQETMPYSCELCLKRFPLRTSLWKHKRAKHGIVNPNSSTSNDTQTPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQEVAQDMDPDYENDQEAADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQVPPQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPSQLAKVTHSSPAAAVTAKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNSSSAEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYEGGEGSSSMVSQVEEDMHTCELCGAQYDDEEALRAHRVRHHGEEESDEDDDGDDGNVPIPPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01075719;
90% Identity: -
80% Identity: -