Htar003725.1
Basic Information
- Insect
- Herminia tarsipennalis
- Gene Symbol
- Hr39
- Assembly
- GCA_945859575.2
- Location
- OX243832.1:6380449-6409273[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.27 3.4e+03 -1.8 0.5 76 158 102 201 41 240 0.44 2 4 2.4 3e+04 -5.0 7.1 74 163 222 311 171 333 0.52 3 4 4.2e-08 0.00053 20.6 0.1 1 21 441 461 441 474 0.91 4 4 9.3e-65 1.2e-60 207.2 0.0 150 408 492 759 470 759 0.85
Sequence Information
- Coding Sequence
- ATGAATACCGCGATGACCAGTGAGGGTGACGCGGTGAAGGTGGAGGGGGGACACGTATCTGTCACCACTATCAGCATGTCAGGACCAGAAACAAGTAACGGTCAGTTCTCGTACAGCTCCAGCGGGGTCCGCATCAGTGTGTCTTCAGTGCCTCATGATGAAGACTCCACTGACGCCGAGATCTCCAAGATCGACTTCACACAACACCAATACGAGGTTAACATGCGTAATAAGAAGAAACGATCGTCAAGCGGAGCGCACTGCGAAGTATCTAACAATGAACGCGAGCGGCCCATGTCCTGGGAAGGGGAACTGTCCGACTCCGAAATGGTTATAGACACCAGTGTCAATAATGACGAAAACAGCAGCTCTCTAGACCTCCAATCATCCCGAGACTCGATCGACACGCTTCGCAACGTGACCATTAAGACAGAGCCGCTGAAGAACGAAGGCTTTCAAGCCGTGGACGAACGAGTACTGGATCTGAAGTACAGCGCGCCGCTGCAGCCGCACCAGAGGAGTCTTAGTATGAATAGGATATCAGTACTAACAGACGCGACATCTCTATCTCTCCCGAGACGGCCGTCGTCGCCCACAAGCAGCGCCAAGTCTCTAGCGCTGAGTGACCAGGGTTCAGCTCCCGTGCATCACACGCCCATAGACCAGGTCCACAATCTTACTATCAAAAAGGAGAATCAGTTGTCTGAGTTAAAATGCGAGCAATCAGTTGGCATGGACAAGTTGATCGGTGCTCTGCACGGCTCCCCACTGCTGGGAAGATTGCCTCGAGTGCAGTCCAGTGCTAGTACTGACTCGGCTGTACACTCTATGTATACACATAGTGTGTACAGCAGTCCTTCGGCTAGTCCCCGCGCGTCCCGCCACTACACTCCCTCCCTGTCCCGCAACAACAGTGACGCGTCACACTCATCCTGTTACTCCTACAGCTCTGAGTTCTCGCCGACGCATTCACCTGTACAGGGTCGTCACCCAGGAGTATTATACCGCGAGCCGACAGCGTACGACACCGCGCATGACGACGAGCCTGACGCGCCTGATGACAGACTGCATCATCATCAGGGAATCAGCAGACAACAACTTATCAATAGTCCATGCCCAATCTGCGGCGACAAAATAAGCGGTTTCCACTACGGCATATTCTCATGCGAGTCGTGCAAGGGTTTCTTCAAGCGTACCGTACAGAACAGAAAGAACTATATGTGTCTTAGAGGAGGCAACTGTCCCGTCACTGTCACTACCAGGAAGAAGTGTCCGGCGTGTCGTTTTGACAAGTGCCTTGGATGTGGAATGAAGCTTGAAGCAATCAGAGAGGATCGAACCCGCGGCGGTCGTTCCACATACCAGTGTTCGTACACGTTGTCAGGCGCGGCATCTACAGGCTCGCTGTTGTCTGCGCATGCGCCAACCACGCTACGACACGCGTCGAGTCTCACTTGCGTGAATGGTCCAGGTTCTTATAGCAGCCGAGGGGAATCGAGTAACAGCCAAATGACGCCAGATATACCGCCGTTATTACAGGAAATAATGGATGTGGAACATCTATGGCAGTACAACGAGTCTGAACTCAGTCGCCTTGGCAAGTCCACGGGCAGTCCCTCAGCCAACCCGCTGTTGGCCGCCAGCGGTATCACCGCACACAACTCTAGCCCTGACTTCCTCGCTGATTTGTGCAATATAGCTGATCATAGGCTGTACAAGATTGTTAAATGGTGCAAGAGTTTGCCGTTGTTTAAGAATATTTCGATCGACGACCAGATCTGCCTGCTGATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGCGGCGTGAGCACGCCGGGCGAGGTGCGCGTCGGCGGCGGCCGCGGGATCACGCTGCAGCACAGCGCTAAGTTGGGTCTAACGCCATGTATAGAGCGCATGCTGAGTTTCACGGACCACTTGAGACGACTCAGAGTTGACAGATACGAGTACGTCGCACTCAAGGTCATCGTACTTCTTACTTCAGACGCGCCCGATCTCCGTGAAGTAGAGAAAGTACGAGCATCTCAAGAGAAAGCTCTAGCAGCGTTACAAGCTTACATAGCAACGCACTCGCCGGGCACTCCCGCCAAATTTGGTGAACTGTTGCTACGTATACCCGAACTGCAACGGACTTGTCAGTTCTTCATGCAAGTCGGCAAAGAAATGCTGAATCCTGCTAACAAAAGCAAGGATGGTGATGGACCAAGTTTCAACCTGCTTATGGAACTGCTACGTGGCGATCACTGA
- Protein Sequence
- MNTAMTSEGDAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSVPHDEDSTDAEISKIDFTQHQYEVNMRNKKKRSSSGAHCEVSNNERERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKTEPLKNEGFQAVDERVLDLKYSAPLQPHQRSLSMNRISVLTDATSLSLPRRPSSPTSSAKSLALSDQGSAPVHHTPIDQVHNLTIKKENQLSELKCEQSVGMDKLIGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPGVLYREPTAYDTAHDDEPDAPDDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVTTRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAASTGSLLSAHAPTTLRHASSLTCVNGPGSYSSRGESSNSQMTPDIPPLLQEIMDVEHLWQYNESELSRLGKSTGSPSANPLLAASGITAHNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLQHSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPDLREVEKVRASQEKALAALQAYIATHSPGTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00042698;
- 90% Identity
- iTF_01076559;
- 80% Identity
- iTF_00794770;