Basic Information

Insect: Herminia tarsipennalis
Gene Symbol: MBD-R2_1
Assembly: GCA_945859575.2
Location: OX243832.1:22590831-22619939[+]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.5e-16 1.6e-12 47.9 0.0 6 64 758 815 753 834 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.5e-16	1.6e-12	47.9	0.0	6	64	758	815	753	834	0.88

Sequence Information

Coding Sequence: ATGGGCGTAAAAAAATGTTGTATTGACAACTGTAAGTCATGTTCTACGAGAAAGGAGGATAAAGGTGTCACATACCACAAGTTCCCCAAAGATGTAACATTACGTGACATTTGGATGTCTATATCACATAATAAACACTCCGACGTCGACTTGCCCATGTATGTGTGCTCACGGCACTTTTGTAAAAATGATTTTCAAATATACAAGGAGTCTAAATACGTATTGAAATCAGATGCTGTACCATCAATTTTTCCATGGTCCAAAGCTGAAATAGAAATGGAGTCTACAAACTCTTTGGTTGATGAAGTAAAAAAGGATGACAGCGAAAAAGCTACAACCAAAGAGTCCGAGATTGAGAGTGTTGCCGCTATTAGAAAATTTATTGAGGAACAGGAGAAAGAAATTCAGGAGCAGAAAAGTAGTAATAACTCACCATGTATAGAGAAAATGAATGATGATAGTATGGATAGTAAATTAAGTCAGAGTGAGACAATCTCTGTGGCCAGTAGCGTTATAGATATGATCATAACTGAGTCTGAACTAGAGCTTGCTAAGAAGAGAGATGTAAAACATAAGATTATGAGTCCTGGAGATATAGGGAACAGTAGTATGGCTCTGTCGGTTGGTTCTAAAGTGGAGGCCAAGGATTTTGGTGAATGCTGGTACTCTGCTGAAATCATAGAGGTTGACTATGATGAAATGGAAGTGTTGGTGCATTATGAAATAGATCAAAAGAAGCTTGACGAATGGATAAGTGTGAGCAGTCCTCGATTGCGCCCAGTCAGCAATGCCACAGTGAAACCTGGCCCAAGTTCAGCAGACAGTATGTCTTCAGACACAACCTCCTTCGGTCCCACTATAAAAGAAGAAACCCAGGATGTCAAAGTAGAAGAGAAGGCCAAACTGACCTTTGTGGTTGGAGAGCGGTGCCTTGCGAGATGGCGGGATAATAGGCGATTTGTTGCTACCGTCAATAATGTATTGGATAATGGGAGTTACGAGATTATTTTCGATGACGGATGTCACTGGACGTGTAAAACTACCCGACTTTATAAACTGAGGCCTGGGAAGGAGGTAGAACCAACTGGGGCCCCCAATTCTCCCATCACTCCCCCTCAATTCGGCCCAGGGCCTAGTAATGTGACCCCACCAATGAATACCTACCCCGCATACCATACACACTTGTTTGACCCCGCTCGAGATTACCTAGGCTCTAAAAGCGAACGCCGCGAAATGAAACGCAAATTAAATATAAAAGAAATATTTAATATAGGGCAGAAGAAGCCTAAAGCCCAGAAGATTGAGAAGGAAAAACCTCAGAAGCCTGTGGTGAGAAAGCCTAGAATTATAAGAAGAAAGACTTTGAAAGTGAAGAAGGAAACTGTAAAACAGACTGAAGTGAAGACTGAGGTAAAAGTTGAAATACCTGCCGTGGATGCTGTGGCCTCAATCATAGGCACTGTACACCAAGAAGAAATACTTGAAGGAAAAAATAAAAAACCAGAGACATCTACGGTTGAAATTAAAGAAAAGCCTAAACCCATAGAAACCGCTATGGCTATAAACAAGTTTAAAACTGAAGACACAGTAACAGACACTGTAACAGATGTTATAAAAGCGCCTATTGAAGTTACTAAACATACTGAAACTGTTGAAATTGATAAAGTGGAATTAGAAGATTTGAAGCCTTATTTAGATCCAGAGGTATTAGAAGAGGAGGTAAAACTTGAACAATTCGAGAAACCAGACGAAGGTAGACACGAGGAAGTTCTAGACAGAATCAAGGAAGCCATAAACAAACTAGAAGATGGTTTAAAAATAGAACAAACAAGTTCGCCAAGACCTGAAATTAAAATTGAAATACCTAGAATCGATACACCAGAAATCAAAATGGAAATATTTAGTCCAAAATTGGGAGTCAACCTTGAACCCAGTGATGTACCAAAAGTAGAGAAAGCTAAAAAGAAATTATCGAAGGTGAAAAAAGTGAAGAAAATAAGAATAATGAGGGAGAAGAAAGTGAAGAAGCAAGTGGAGAAAGTTAAATCTGAGTTGGAAGTGATGAAGAAGCAAGTAGAAGAAATGAGAAAGCAGATAATGAAGAATCAAGAGGTGTCAAAACAAGGGGAGATGAGTAAGAGTTTCTTGTTGCCAGGTGAATGGTGTTGCAAGTGGGTGAATGGGCAGCCTGTTGGGACGGTCAGCGAGATCGAGTGTGAGGTGAAACTGGATCCTAGTGGGAACGTTCCTTTGCCTAGGAGAAGTGTGCAGGTTGAAGACGACAGATTGCCGCCGGGCTGGACGAAACACATGGTGCGGAGGAGTTTTGGGCACTCGGCTGGCAAGTGGGATGTTGTGCTTGTTAACCCAGAAAACCGAAGATTCCACACGAAGAACGAAATACGTGTCTATTTAGAACACAATCCCAACTTGAACCTAGAACCTTACGAACATCCCCTAACAGATTTCGGCGTACATTTGAAGCTCGCACGTCGTTTGGGGTGGCTATCACACACCCCCGATGGCATCGCTGGGGGTCCAGATAGACATTTGCCACCTGGAACTTTGAGTAGCACTTCTCCATTGATAAAACGAAGGAGTTTAGGCCTTAAGCGGAAGGGAATAAAGGTCAAAAGTAAGAAAGTGCCGAAGCTGACTATTAAGATGAAAGCACCGCATGATTCGATGCCTCTTGGTGCCGAGGCTTCGACCACGCAAGTTGCAACTCATCACGTCGATGAAACTGTACCTGAAAATAACTTTGAACTGAACACTCCCAAATTGGAAGACGGATTTGTTTACGTCGGCTCCTTAAAAGTGCAAATAATAGACAACCTGCTACGTTGTCCAGCTGAGGGCTGCTTCAAAAACTTTAGAAACAACACTCTAATAAAAATGCATATCAAACATTATCACAGAGATCTAAGGAAATGTTTAGGCGCTACACCAAAAGTCTTAGACCTAGCATACGCCAGAACTATGCCCACAGAAATGGAATCACCACGACCCAAAGACGACAAAATAATCAAAGTCAAAATACCTAGACCGCCGAAACCAAAACCAGAAAAAGAAGAACCGAAACTAGAACTTATAGAAAAACCGGAACCACAAATCGATGTCACATCCCTAACTCCGGTAAAAGATAGCGAGATTTCACTTCCGATACCTAGAAGTCAAGACTCGCCAAAGTTGCGGCAAGCTTTAGCAACAAAACCGGTGAAAAGACCTAGAGTTTTACTACCGGTACGTCGTTTAGAACCGGAACCGGTTTTACCGGACCCTATAAACGAAGACGTAGATTTTGAGGTCAATCAACTATCAGAACCTATAATTGAGATTCCTATAATGGACAAATTGGATTTCGAAACTGCAATATCTACCCACACTGTTACAAAACCCTTGGAAAAGAAACGTAAGGGTGAGAAAAAGAAAAAGTCGTTTGCTTTGCCTCCCAAAGTGCCAATGAGTGAAGAAGAAGATTGGTTCGGTATGAACTCTGATGTTGACACAAGGTCTAGTTTCCCTCGGTCCGGTACTCCTGATTCTAAAGTTGATAGTAAAGCGGCCATAGTTTCGTCTGAGTCTAATGAGGAGAATAAGGAAATTAATAATATGTACATGTATAATGAGAGTGGTGAGCGTATAAAGATAGTGCACATGAAGCGCGAAGAGATAATCAACTGTCACTGCGGGTACCGTGAGGAGGACGGGCTGATGGTGCAGTGCGAGCTGTGTCTGTGTTGGCAGCACGCGCTCTGTCACAATATACAGAGAGAGGCAGATGTACCAGAAAAATACACATGCAGTATATGCCTGAACCCCCGTCGTGGTCGTCGCTCACAACGCTTCCTGCACGACCAGGACAGACTGTACGAGGGGCTGTTGCCTGGTGCCAGACCGTGCGAGTCTCTGAGAAGGTCGCACGAACTCGCTGGGAACTTGATCAGGATACAGGATGCCTTGCACGCGCTCAGAGTCAAGAGTTATGTCGCCacTAAAAAAGACCATCCCAAACTATACCTGTGGGCTAAAGACTGGGAGCACGCGGAGATACAATACACGCAAGAGAAGCTGAACTCTGACTACTCGGACCTGAACATAATGATCAGTAGCATCGGTAAGAAGAACCTGCCCATCAAGCCTGAGGACGTCAAGGATATATCTTTGGATATTAGAACTTCACCCTCCGAGGATATTGAACATGACAGGTTCTCCCAACGCGACGTGGCCCTGGGCTCCCAGTCGCTGCTGAGCGGGCTGCTGTCGAGTCCCGGCGGAGCCTCGCTGGACCTGCCCATCAGCACCTCCGAGTTGGAACGACTCGCTAAGTCTGTACAAGAGCAAGAAAGTCAAGGTGTGTCAATATCGGCGCCTCAGCCCGAGGCGGCCATAGAGAACAGCGTGTGTCGCGAGCGCCTGCTGAAGCACTTACAGCGCTGTCAAGCGCTCATAGACGCGCGGCTCGACTCTATTGAGGCACAGGTCGCTGAACTGGAATCTCAAGACCCATCGTTTGAAGACGACGAAACGGCGGACTATTTCCCGCGAACCAAGCAGACTATACAAATGTTAATGAGAGATCTTGATACTATGGAGGAACTCGGAGTCATTACATAG
Protein Sequence: MGVKKCCIDNCKSCSTRKEDKGVTYHKFPKDVTLRDIWMSISHNKHSDVDLPMYVCSRHFCKNDFQIYKESKYVLKSDAVPSIFPWSKAEIEMESTNSLVDEVKKDDSEKATTKESEIESVAAIRKFIEEQEKEIQEQKSSNNSPCIEKMNDDSMDSKLSQSETISVASSVIDMIITESELELAKKRDVKHKIMSPGDIGNSSMALSVGSKVEAKDFGECWYSAEIIEVDYDEMEVLVHYEIDQKKLDEWISVSSPRLRPVSNATVKPGPSSADSMSSDTTSFGPTIKEETQDVKVEEKAKLTFVVGERCLARWRDNRRFVATVNNVLDNGSYEIIFDDGCHWTCKTTRLYKLRPGKEVEPTGAPNSPITPPQFGPGPSNVTPPMNTYPAYHTHLFDPARDYLGSKSERREMKRKLNIKEIFNIGQKKPKAQKIEKEKPQKPVVRKPRIIRRKTLKVKKETVKQTEVKTEVKVEIPAVDAVASIIGTVHQEEILEGKNKKPETSTVEIKEKPKPIETAMAINKFKTEDTVTDTVTDVIKAPIEVTKHTETVEIDKVELEDLKPYLDPEVLEEEVKLEQFEKPDEGRHEEVLDRIKEAINKLEDGLKIEQTSSPRPEIKIEIPRIDTPEIKMEIFSPKLGVNLEPSDVPKVEKAKKKLSKVKKVKKIRIMREKKVKKQVEKVKSELEVMKKQVEEMRKQIMKNQEVSKQGEMSKSFLLPGEWCCKWVNGQPVGTVSEIECEVKLDPSGNVPLPRRSVQVEDDRLPPGWTKHMVRRSFGHSAGKWDVVLVNPENRRFHTKNEIRVYLEHNPNLNLEPYEHPLTDFGVHLKLARRLGWLSHTPDGIAGGPDRHLPPGTLSSTSPLIKRRSLGLKRKGIKVKSKKVPKLTIKMKAPHDSMPLGAEASTTQVATHHVDETVPENNFELNTPKLEDGFVYVGSLKVQIIDNLLRCPAEGCFKNFRNNTLIKMHIKHYHRDLRKCLGATPKVLDLAYARTMPTEMESPRPKDDKIIKVKIPRPPKPKPEKEEPKLELIEKPEPQIDVTSLTPVKDSEISLPIPRSQDSPKLRQALATKPVKRPRVLLPVRRLEPEPVLPDPINEDVDFEVNQLSEPIIEIPIMDKLDFETAISTHTVTKPLEKKRKGEKKKKSFALPPKVPMSEEEDWFGMNSDVDTRSSFPRSGTPDSKVDSKAAIVSSESNEENKEINNMYMYNESGERIKIVHMKREEIINCHCGYREEDGLMVQCELCLCWQHALCHNIQREADVPEKYTCSICLNPRRGRRSQRFLHDQDRLYEGLLPGARPCESLRRSHELAGNLIRIQDALHALRVKSYVATKKDHPKLYLWAKDWEHAEIQYTQEKLNSDYSDLNIMISSIGKKNLPIKPEDVKDISLDIRTSPSEDIEHDRFSQRDVALGSQSLLSGLLSSPGGASLDLPISTSELERLAKSVQEQESQGVSISAPQPEAAIENSVCRERLLKHLQRCQALIDARLDSIEAQVAELESQDPSFEDDETADYFPRTKQTIQMLMRDLDTMEELGVIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00794711;
90% Identity: iTF_00794711;
80% Identity: iTF_00794711;