Hlin008020.1
Basic Information
- Gene Symbol
- LZTR1
- Assembly
- GCA_026182355.1
- Location
- JAPFBL010000369.1:242884-245148[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.7e-13 2.2e-10 42.6 0.0 3 106 368 487 366 490 0.83 2 4 0.12 1.5e+02 4.5 0.1 76 108 489 521 481 523 0.84 3 4 9.7e-22 1.3e-18 69.2 0.0 8 96 581 669 575 685 0.84 4 4 5.3 6.9e+03 -0.8 0.0 76 100 683 707 678 715 0.83
Sequence Information
- Coding Sequence
- ATGGCTGATACAAATAAAACGAGTGGGAACCGAGAAAGTGATGATCAGTGGGCTGATGGTCCCGAATGTGTTGTGCTGTCTTGCGGACCAAATGAAGGGATTTACAAATGGAAAAGAATGCGCGACTGTGATGATTTTGTTTGTGGTAAAAGAAGCAAACACACTGCAGTTGCTTATAACCATGCTGTTTATATTTTTGGTGGAGATAATGGTAAGATTATGTTAAATGATTTATTACAATTTGATGTTCTAAAGAAATCTTGGAGTAGGTCTTTACCATCTATTGGTAATCCACCAGCTCCGAGATATCACCATTCAGCTGTTGTTTATGATTCTTCTATGTTTATATTTGGCGGTTATACTGGTGATATTCATTCTAATTCAAATTTAACAAATAAAAATGATTTATTTGAATATAAATTTTCAAACGGTGAATGGTGTGAATGGAAATTTAATGGTAAAACTCCAGTGGCTCGTTCTGCACATGGGGCAGCTGTTTATGATAATAAGTTATGGATTTTTGCTGGTTATGATGGAAATGCCAGATTAAATGACATGTGGACTGTATCTCTTCTTCCAGGAGACGATAAAGGATGGCAAGAAGTCCAACAAGGTGGTGATTATCCCCCGACTTGTTGTAATTTCCCTGTTGCTGTTACAAATGATTCCATGTTTGTGTTTAGCGGACAAAGTGGCGCTAATATAACAAATAGTTTATTCCAATTTCATTTTAAAGAAAAAATATGGACTAGGATTTCAACAGAACAAGTTCTTAGAGGTGCACCAAATCCTCCTGCATGGAGGTATGGCCATACTATGGTTGCTTTTGGACAACATTTGTATGTTTTTGGTGGGGCAGCAGACAATACGCTTCCGAATGATTTACATTGTTTTGATCTTGATACTCACAGTTGGTCAATAGTCACTTGTTCATATGATTCTGTTGTCCCAACTGGTCGATTATTTCATGCAGCAGCTGTTGTAGATGATGCAATGTATATTTTTGGTGGAACAATCGATGGAAATAACGTAAGAAGTGGACAAATGTATCGATTTCAATTTTCAACATATCCTAAATGTACACTTCATGATGACTTTGGCAGACTTCTTGCAACGAAACAATTTTGCGATGTTCTTTTCCTTGTTGGCCCTCGTGAAGAACCAATTAAAGCCCACATGGCTATGGTTGCTGCTAGATCTCAATGGCTTAGAGCAAAAATCATCTCTTGTCGCGATCATTCAGAAAAAAATCAAGAAGGACTTGTTCAAGTAGTTCTTAAAGATGCATGTCCAGAAGCATTTGAAATTGTTCTCAATTATATTTACACTGATTTAATTGATCCTTGGAACAAAATTGAAAACCCCGAGTGCTATTCAGTTGTATTGACTATGATGGATGTTTATAGACTAGCTGTTCAATTTCACATGGTTCGTCTCGAATACCTCTGTGTTCGGTATTTTGAAGCTATCATCAATCATTCAAATGTATTCAAAGCTTTAGAAAACGCTGACACTCTTAATCTATACTTCATTAAAGAACTCTGTTTAAAGTTTATTCTAAAAGAATCAAATTACTATGATATAATAATGAATAAAAATTTTGAACTTCTCGATCGTTCACTTATAGTAGAGATTATCCGCAGGCAAAAACAAAAAGTGAAAACATCAATCGAACTTAGCAGCTTCAACTCAGGAATGACTTTAGAACATGACATGGAGGATTTTCTTTTATCAACAGGTCATGAATTTTTCGATATTACTTTAATGCTTGAAGGGAATGAAATTCGAGCACATAAAGCTATTTTAGCAGCAAGAAGTGGTTATTTTGAAGCAATGTTTCGCAGTTTCATGCCTACTAATAACTCAGTAAATATTCAAATGGGCGAAATGGTTCCTTCGAGACATAGCTTTGAATCACTTTTACGTTATATCTATCACGGTGAGATCAATATGCCTCCTGAAGACTCTCTCTATTTATTTAGTGCTCCGTATTTCTACTGTTTTTCAAACAATAGATTACAATCATTTTGTAAACAAAATTTAGAAATGAATATAACACTTGAAAATGTTTTACAAATTTTAGAAACTTCTGATAGAATTCAAGCAACAGATGTGAAAAAGTACTCGTTAAGTATAATTGTAAGTAATTTTAAAAAAGTTGCAAGAATGTCTCGAATGAGATCATTAACGAAAGAATTGTTACTTGATATTATTGATGTTCTTGCGGAAGAGAGTTCTCCAAAAAATAGCCACTACAGGGCGTGA
- Protein Sequence
- MADTNKTSGNRESDDQWADGPECVVLSCGPNEGIYKWKRMRDCDDFVCGKRSKHTAVAYNHAVYIFGGDNGKIMLNDLLQFDVLKKSWSRSLPSIGNPPAPRYHHSAVVYDSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFSNGEWCEWKFNGKTPVARSAHGAAVYDNKLWIFAGYDGNARLNDMWTVSLLPGDDKGWQEVQQGGDYPPTCCNFPVAVTNDSMFVFSGQSGANITNSLFQFHFKEKIWTRISTEQVLRGAPNPPAWRYGHTMVAFGQHLYVFGGAADNTLPNDLHCFDLDTHSWSIVTCSYDSVVPTGRLFHAAAVVDDAMYIFGGTIDGNNVRSGQMYRFQFSTYPKCTLHDDFGRLLATKQFCDVLFLVGPREEPIKAHMAMVAARSQWLRAKIISCRDHSEKNQEGLVQVVLKDACPEAFEIVLNYIYTDLIDPWNKIENPECYSVVLTMMDVYRLAVQFHMVRLEYLCVRYFEAIINHSNVFKALENADTLNLYFIKELCLKFILKESNYYDIIMNKNFELLDRSLIVEIIRRQKQKVKTSIELSSFNSGMTLEHDMEDFLLSTGHEFFDITLMLEGNEIRAHKAILAARSGYFEAMFRSFMPTNNSVNIQMGEMVPSRHSFESLLRYIYHGEINMPPEDSLYLFSAPYFYCFSNNRLQSFCKQNLEMNITLENVLQILETSDRIQATDVKKYSLSIIVSNFKKVARMSRMRSLTKELLLDIIDVLAEESSPKNSHYRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -