Hlin020581.1
Basic Information
- Gene Symbol
- lilli
- Assembly
- GCA_026182355.1
- Location
- JAPFBL010000138.1:5231805-5260509[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.4e-09 0.00018 22.9 0.0 29 94 117 179 99 207 0.72 2 5 1.2e-06 0.091 14.0 0.2 342 390 243 293 209 310 0.73 3 5 2.1e-05 1.5 9.9 13.7 409 511 361 453 345 456 0.61 4 5 0.03 2.2e+03 -0.5 19.7 101 266 525 684 466 708 0.44 5 5 0.23 1.7e+04 -3.4 13.4 420 476 876 931 822 967 0.54
Sequence Information
- Coding Sequence
- ATGCAAATCGCAGAAGCAATAATAATTAAACAGAATAAACCTACAATAAATATTCAAACGGGTAGTAGCGAGAGAGTACTTAAACTATACGCGCCTGATTGGATGAAAAAACCGTTAACTGTCAGTACCCCCACCCCACCACAGGAGAGAGTAGAAGGGAAGAATAAGAGTTACGTGCGTTCACTTGTACCGGCAGAGAGCGACTGGGGATTCCAGGCGGTAGTCTCAAGTTGCTCGAAGCGCTGCAGGCTGATCCCCCGTAAACGACACCATTCCACCATGAGCGAACACGCGACAGACAGAGAAGGTGAAAGGGAGCGGAGGAGTGCATTGATGTCCACCCCTCAGTACTCCCCACCATTGTTTGGCGCCCCAGTTAGGGTAAGCCCTTCTCCAGAAGATAAAATGAAACAGCACATACAGAGTAAGCTTGGTGAGTATGATAAGGTTAAACATCTTCTGGAAGAGCCGAGACAGTTATTAGGCCTACCGCCTCCCGTCACTCCTCTTGGCATCAGTCGACCTCATGAATTCAAAAAGCCGTCATCCAATCATGTGTCTAGACCACATTCCCTGAGAGTTGGCTACTTTAAGCCTGCTGATGGTAAACCGGGGCACGGTGGGCGAGGATTTTACCCTGGTCAACCCTTGAAACCAGGAGAACAAAAAATTAAAGCCCCTGCTCGTCCACCTAGGACAAATACTGGGCCCAACCTCTACAACAAAGACGCTCATGGTGCTAAAGACGTGGAGCATATCCTTAAAGAAATGACGAAAATGGGTTCTATGACTCCACTGACAGCTATGGCTGCTACTCCTAGAACAGAAGTAGATAGCAAGTTTAGCTTTGGAAATGAATTTTCAGAGCCTACTGAATCAATCCAAACAGTATCTCCATTTTTAGTGTCTCCACCGAAGTTGGAATCTTCGCCTGTTCCAATATCTCCTCCTCCAATTCCATGTTCACAAGATTTTACCGCCATTACCGTCGTTCGGAATCAATGGTATGCGTTGTATACACACAGACTCCCCAGTACCACACCCAGTCATGATGTCTGCCTCTGTGGCGTATCTGTGCAGAGCACGAAATCCGAGGATTTGGTTCGTGACTTGAGTCTGTCTGATGACAGTGATGATGAAGTGAAGACAATGGCTGAAGACAAACTAGATTTAAACAATAGAACTGTCCCAGCAACTTCTCCACAGGAAAATGTAATGATATCGGAATCATTAAATTTGGCCATGATGTCTTCAACCTCATCAAGTAAGGACTCAGGTTCCGAGAGTTCAGAAAGTACATCTAGCATAAATTTTGAACCTCCTCAACCACAGCAGCAACCCCGATGGGATCTTAAATCATTCTTACCTCCACCGGTTTGCTCTGAACCAAAATTAAATAGCAGTTCTGTAGATCATCCGAACAATAAGCTAGAGGAAGATTTTGAACTTAAAGCTCTAGCAAAAGATGTATTAGTCAGGCCACCGCTTCTGTCTAGTCTCTCTGATAGTGATATTGAGAAAAAAGGTTCTAAAGTCGGAAATTCTCGACCAAAAAGAAAAAGAAGAATGGCGAAAAATAAGGTTACATCTTCAGATAGGGATGAGGAGACAAATTCAAGGTTTGAGAATACAGTTGTGCCTTCTCCTCAGAGTTCAAGGATCCCTAAAACGCCTTCTGGCAGTGACAGTGATGAAAATGTTGAACGTAAGAAACGGATATCTGTTAGACGAATTAAATCAAACACCTCTTTAAGTAGTAATAGTGACAATTCATCTAAACATAAAAATGGGGAGAGAAAGGAAGATGAACAAGAGAAACCAAGTTACAGGAAAAAGCCATCTTTAACATTAGATGTTGAACCTGTGAAGTCTTCTAGGAAGACTAGGAGGAGTGACAAGCATGTTTCTTCTGATGATTATAATGAGTCTTGTGACAAACTTGAAAAGAACCTAAAATATTCCAAGTCATCATTAAAATCTGGTAGCGATGAAGATGTAAAACCTTTGAAGAAACAGACAACTCCTTTACAGAATCAACATATTTCTCAAACCGTATGCGATCTTGACTCTGAAAAAGAGGAAAGCCCTCCAAAGTTAGATACAGATGTTTTAATTGTCCAAGACAAAAAGAAAAATGATACCATAAGGAAAGTATTTTCTGTTGGATTGAAGAAAGAAAATGAAAGTGGTGGAGGCAAAGCAGGCGCTGGTAAAGGAGGAGCTAAAGGTGGAAAACATGGAGGGAAGGGAAAGGGTCCGAGAGTTTCCGCTACCATTTCAATCCCAGAAGGAAATTATAATAAAACTCCAACTAGTTCAATTAGGGTGGAAAATGTATGTGCTACTTCTTCGCCACTTCGTAATGCTGATGTGATTAAAGAAAAATCTGAGCCAAATTTTGAAGAAATTGGGAATTCTTATGACGTACTACCAAATACAAAATACGGAGTACCTTCAATTATGTGTTCTATTGAATTGTCCAGACTGTCATTTATACCAAACAAAAAGTATTCTTCCCATAAACTGGATAGACATACCAGGTTAGAGAAAGGTTTAGATAAAGTGCACTCGTCGAAAGAAAGTTTATTCGAAGATTCTTGTATTTTTAGTGAATCTAAATCAGATAAAATATCTCCAATGCGTGACTCTGTTGAGGAAAATTTTAGTGAAGAAGTAAAAAAAAGGCTTACTCCAGATGTTAAAGGCGATATTTCAAACAATATATCTACATCAGGTCACCAAAGTAGAAGAATGAGCTCAAGTTCATCATCATCAAATGAACGATGGAGTTCTTCTTGGAATAGACAAAAAAGAAAAAAGTATATTGAACGATTACCAAGTAGAATTGATGGAACTCTGACATCAACCCCACCTACCAATCATGAATGGCAGAAAGAATCTAATGATACTGAATCTTTTGATTTGCGAGAGCAGGAAGTAGATGGTTCTAGAAGACTTTATTATTCATACTTCGAAAACATTGAAGGAAATCAATACCTCGATATTGATGACAAGTATGACTATCTATCAGAAGCCAAAAGATTAAAAAATGGCGCTGATAAAGAAAATGATCAGACAGCTCAAGGTTTGAAGTATTTGGAAGCAGGGTTGTATTTTGTGCTTACGGGAAGTACAATGGAACATGAAGTAGTCACAGAGAAAGCTGCTCAAACGATGTACTCTGACACGCTACATCTAATTAAGTATATTTCCAATAAATTCAAGAGTCAGCAGAACTCAAGTCCTGAAGGAAGTATACAATGTAAACTGGCTGTCTTAAGTTTGCGTTGTGAGTCTTTACTTCTATTTAAACTTTTCAAAATGAGAAAAGCCGAGTTGAAAGAGTATCAACAGATAATAACGGATTACATGCAGAAGGCTGATATTACGATTGTAATGCAACATTAA
- Protein Sequence
- MQIAEAIIIKQNKPTINIQTGSSERVLKLYAPDWMKKPLTVSTPTPPQERVEGKNKSYVRSLVPAESDWGFQAVVSSCSKRCRLIPRKRHHSTMSEHATDREGERERRSALMSTPQYSPPLFGAPVRVSPSPEDKMKQHIQSKLGEYDKVKHLLEEPRQLLGLPPPVTPLGISRPHEFKKPSSNHVSRPHSLRVGYFKPADGKPGHGGRGFYPGQPLKPGEQKIKAPARPPRTNTGPNLYNKDAHGAKDVEHILKEMTKMGSMTPLTAMAATPRTEVDSKFSFGNEFSEPTESIQTVSPFLVSPPKLESSPVPISPPPIPCSQDFTAITVVRNQWYALYTHRLPSTTPSHDVCLCGVSVQSTKSEDLVRDLSLSDDSDDEVKTMAEDKLDLNNRTVPATSPQENVMISESLNLAMMSSTSSSKDSGSESSESTSSINFEPPQPQQQPRWDLKSFLPPPVCSEPKLNSSSVDHPNNKLEEDFELKALAKDVLVRPPLLSSLSDSDIEKKGSKVGNSRPKRKRRMAKNKVTSSDRDEETNSRFENTVVPSPQSSRIPKTPSGSDSDENVERKKRISVRRIKSNTSLSSNSDNSSKHKNGERKEDEQEKPSYRKKPSLTLDVEPVKSSRKTRRSDKHVSSDDYNESCDKLEKNLKYSKSSLKSGSDEDVKPLKKQTTPLQNQHISQTVCDLDSEKEESPPKLDTDVLIVQDKKKNDTIRKVFSVGLKKENESGGGKAGAGKGGAKGGKHGGKGKGPRVSATISIPEGNYNKTPTSSIRVENVCATSSPLRNADVIKEKSEPNFEEIGNSYDVLPNTKYGVPSIMCSIELSRLSFIPNKKYSSHKLDRHTRLEKGLDKVHSSKESLFEDSCIFSESKSDKISPMRDSVEENFSEEVKKRLTPDVKGDISNNISTSGHQSRRMSSSSSSSNERWSSSWNRQKRKKYIERLPSRIDGTLTSTPPTNHEWQKESNDTESFDLREQEVDGSRRLYYSYFENIEGNQYLDIDDKYDYLSEAKRLKNGADKENDQTAQGLKYLEAGLYFVLTGSTMEHEVVTEKAAQTMYSDTLHLIKYISNKFKSQQNSSPEGSIQCKLAVLSLRCESLLLFKLFKMRKAELKEYQQIITDYMQKADITIVMQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -