Basic Information

Insect: Hermaeophaga mercurialis
Gene Symbol: RREB1
Assembly: GCA_951812935.1
Location: OX638363.1:28438764-28454044[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00026 0.031 15.6 2.6 1 23 81 103 81 103 0.98

2 16 0.0002 0.023 16.0 0.3 1 23 116 138 116 138 0.98

3 16 5.8e-05 0.0068 17.7 6.4 1 23 144 166 144 166 0.98

4 16 0.092 11 7.6 0.1 1 23 224 248 224 248 0.88

5 16 0.0019 0.23 12.9 1.1 2 23 254 276 253 276 0.92

6 16 0.38 45 5.7 1.9 1 17 322 338 322 342 0.77

7 16 0.069 8.1 8.0 0.1 1 23 469 491 469 491 0.96

8 16 4.7e-05 0.0055 18.0 1.9 1 23 500 522 500 522 0.98

9 16 0.0014 0.16 13.4 2.3 1 23 528 551 528 551 0.97

10 16 0.00047 0.056 14.8 3.0 1 23 920 943 920 943 0.97

11 16 0.00047 0.056 14.8 0.4 2 23 1140 1161 1139 1161 0.97

12 16 0.12 14 7.2 6.3 1 23 1167 1190 1167 1190 0.97

13 16 0.041 4.8 8.7 1.1 1 20 1217 1237 1217 1238 0.94

14 16 0.14 16 7.1 1.0 1 23 1289 1312 1289 1312 0.94

15 16 0.016 1.9 10.0 0.4 3 23 1359 1379 1357 1379 0.93

16 16 0.0035 0.41 12.1 6.0 1 23 1385 1407 1385 1407 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00026	0.031	15.6	2.6	1	23	81	103	81	103	0.98
2	16	0.0002	0.023	16.0	0.3	1	23	116	138	116	138	0.98
3	16	5.8e-05	0.0068	17.7	6.4	1	23	144	166	144	166	0.98
4	16	0.092	11	7.6	0.1	1	23	224	248	224	248	0.88
5	16	0.0019	0.23	12.9	1.1	2	23	254	276	253	276	0.92
6	16	0.38	45	5.7	1.9	1	17	322	338	322	342	0.77
7	16	0.069	8.1	8.0	0.1	1	23	469	491	469	491	0.96
8	16	4.7e-05	0.0055	18.0	1.9	1	23	500	522	500	522	0.98
9	16	0.0014	0.16	13.4	2.3	1	23	528	551	528	551	0.97
10	16	0.00047	0.056	14.8	3.0	1	23	920	943	920	943	0.97
11	16	0.00047	0.056	14.8	0.4	2	23	1140	1161	1139	1161	0.97
12	16	0.12	14	7.2	6.3	1	23	1167	1190	1167	1190	0.97
13	16	0.041	4.8	8.7	1.1	1	20	1217	1237	1217	1238	0.94
14	16	0.14	16	7.1	1.0	1	23	1289	1312	1289	1312	0.94
15	16	0.016	1.9	10.0	0.4	3	23	1359	1379	1357	1379	0.93
16	16	0.0035	0.41	12.1	6.0	1	23	1385	1407	1385	1407	0.98

Sequence Information

Coding Sequence: ATGCAGGGTGCAGCTTTAGTACCTCACAACCCTCAACAAGGATTTGCACCTCCATCGGGCCCTATTGTTTCAGATATGGAATCACCGTCTTCGCCAAACGATATTACCAAAGAAACCGCAAACCGAAGCGACTCTGGAATCTTCTCTTGTACCACCAACACAACAATAGACCAAACGGATAGTTCGAAGACCTTCGACAGCGGCGACAATAGAAGTGACTGCTCTTCCCCAGAGCGCAAGTACTTTTGTCCCATTTGCGAAAAAATGCTAACCTCCCAACACAAGTTTACCCTTCATATTAGATCTCATAACAACGAAAATGAAGTACAAGACTCAGAAAAGGGTTTTACTTGCAGAATTTGTTCCAAGGTATTAAGTTCCAATAGCAGTCTAGATCGCCACGTTTTGGTACACAGTGGGGAACGTCCTTTTCACTGTAAATACTGTGGAGATACATTTACGACCAATGGTAACATGCATAGGCATATGAGAACCCATTCACAAAGAAACGAAAGTAGCTATGAATCTGATGGTAGCATAGACAGCGGAAGTTCCAAAAGCAccgaatttaataataataaaatagagaaaaacaaaaGGAAACACGAAAGTAATGACACCAGCGAGAAGAAACCAAGATTGGACTTAGAAATTAACATTCCCCAAACATTCCAATGCCCCGTATGTGAGAGATCAGATTTTAACTCTGCTACTAATCTAGAAGCTCACTTAGAAGACAACCATCCTGATTATCCGACTAAATGTCATATTTGTAAAGAGAACTTCGTCAACAGTAAACTGCTAAGTGCACATAAATTAGCCGTCCACGAAAATTCTACAAATAAACAGACCGTTATCGGTTTTGAAGATCTAACGTTCGTTGATTTTTCCAGCAAAAAGTTTCCCCACATCGCTAGAAGGGAATGTGAAATGAATCTTCATAAAGCTTCTAGTGGATTAAAATTCCAATGTAAACATTGCAACAGAGCTTTTCCATGTACTAACTCTTTAAGCATTCATGAGAGTAATTGCAGTTCGCCTGTATCTCTCAAAAATATAGATCATAACATCATCTCGCAACCTGATATAAGAAGAATGGAATTTTTCAACAGATTGAATCTGGTTGATAATTCTCCTGAAAAGCAGAGTTTGACATCATTCACATCTAATAAATTACGAGAGCATCTAGCTAGAGCAGTAGATAATACCAAAGATTTGGCTGATATTCAGTCAATTTTGTCAAATATCAATTTGCAAAAACTTCAAACTGATCAAGCTGATCTTCAACAACATACtcctattaaacaaaatttagacAATTCACTTGATTACCAAAAAACTGAGGAAGAAGAATCTCAAGATCTCTTTGCAgtagaatttagaaaaatgaaactGAGAGGAGAATTTCCATGTAGGCTCTGCACCGCTGTGTTTCCAAATTTACGAGCCTTAAAAGGGCATAACAGGGCACACTTGAACGGTAATAACAACGGTACTTATCACTGCAATATGTGTCCACACTCTTCCATAGATAAAGCCGCGTTGATTCGTCATATGCGCACACACAATGGAGATAGACCTTATGAATGTGCTCTCTGTAACTATGCATTTACAACCAAAGCCAACTGTGAGAGACATCTTAGAAACAGACACGCCAAAACTACTAGAGAAGAAGTAAAAAAGTCGATAATATACCATCCGTCAGAAGACCCAACCAACGAAGAATTAAATAAACTCGTTAGCAAAGATGACACCAAAAAGATATCCACACCAACAGAAGAGAAAGTATCTTTTGTGACCCCGAAATTTTCAGAATTGTTGCATAATAATactaacaaattaaaatctGAGATATACCAGGAAATGTCGAATGTTAATACAAAACCGTTTTCGAATATTAACGATACAATAAGAAACGACAATTTAAGATCTTTGAAATTGCAAAATGACGTACCGTACGTTACAGCGTTTCCTCGAAATTTTTCCAACAAGATACAAGTTAAAGATCTGAATGCTTTAAAAAATACCTACGGCAATGattcagaagaagaagaagattatattgaggaagaagaagaacaacCGCTCGATTTGGTGTTGGATCTAAGCAAGAAAACTCATgaaagaacagaaaaaaatgtagaaGATCAGCCCCAAGATTTAACTAAAAAGGCTTCTCTTCCCGTGCAGCAACAGTTACCTCCAAATATGAGTCAAATTTTTGCCCAACATATACTTAAAGCTCCACCAAAAATTGATCCAGCAGCCTTGTATGCTACTCAACTTGCTTTGTACAGAAGTGGATTTCCTCTTCCAAGCTGGCCAGGCTTTTCTTTAAACCCTCTATTATTCTCTGTCCCACCACCTTTACCACAAAATAGTACTCAAGAACTAAAGGAAAGAATGCAACGCTTTCAATTATGTGGAGGATCGATGATTTCAGAAGAAGTTAAAAATCTGCAAAATCTACAGCGCCCTTTCCCCGTTTCACCACCATATCCTAACGACTTCAGAGTAGAATCTAAACctgaaattttattagaaaataatttttctactcCGAAAAAATCCGAAGAATTAAAACCGCTAAGTCTAAATATTGATCCTAATTTTCATGATAATCTTAATAAATTACAAAGTCCTATCCCCCCAAATAAACCCGATTTAATGCATTCTCCTAATGCTGTAAAGATGGTAATTAAAAATGGCGTTTTGATGcctaaacaaaaacaaagacgATACAGAACTGAAAGACCGTTTACATGTGAACATTGTTCTGCAAGATTTACTTTAAGATCTAATATGGAAAGACACATTAAGCAGCAACATCCACAATATTGGTCTCAAAGGCAAAGAAGTGCTGTTGGTACGCCAGGGAAAAAACCTCAAGTGGGGATTAAATCAACTTACTGCGATTTAAGCATTCCTAATCCCAGCTACGATTTTTGCAAATACCAAAAATTCGAAGATACCAAAGAGTTAATGAATGAAAAGCTTAAATATTCTCTTTTGTCTCAACAACTCAGTAGATCTGATTATAAAAAAGAGGACGATGAGGATTGTGCTTTAATTATTGATGAAATCGAGGAAAAAATTGACTCAAAGACTGAAGAAAATGGACACGTTGAAGAAAATAAAGCCGATATTAAAACTAACAAAGCCGAAGAAAGCCCAGATTTAGTTCCTGTATCTAGGTTACTTGACAACGCTTCGCAACAACAATTTAAAGAATTCTTTAAAAGGGAAGGCGAAGAACATGAAGTTGGATTGGCTAGTGAGGAAGACGAAGAAGGTTTAGTAGCCAGCGGAAGTACTAGTGAAGGGAATATATCGGGGACTGATGAAAACAGATCTGAGTCTGAAATTGTGCAGCCTGCAAAGAAGAAATCTGCTTACTCCTTGGCTCCTAATAGAGTAAGTTGTCCTTACTGTAGCCGAAAATTCCCTTGGACTTCTTCTTTACGCCGTCATATTCTCACACATACTGGTCAAAAACCTTTCAAGTGCAGCCACTGTCCATTACTATTCACCACAAAGTCTAACTGTGACCGTCATCTTTTAAGAAAACATGGAAACACTGCTACTACTATCCCAAACGATATCCAAAACAacacaaattatttaatgagaAATGTTCCTGAGCGACCATTTAAATGTTCTAGTTGCCCTAGCAGCACTTTTTCTACTTACTCCAATCTAAAAAAACATATCAGTTGTAAACATTCCACCAATGCGCAAGGAGATGATATTAAAGCACAAGGATACGAAGCTGGTAGCTCAGAAGACGAAAAGCTTCCAAAAAACGAATGGGAAAAACCTCCATCTTACAAATTACCCGAATCAATCCAAAATTCCGACCTTCCTTATAAATGTCATTTATGTGAAGGGTCGTTTTCAGAACGACAGGATGCGCTAGATCATATTAAAGACAAACACAGCTCGGAATACGAACTCCTGATGTCAAAAAATGCTTTAGAATGTAACCCACCACCACTTGAAGACCAATCCAATATTGATGATGACGATATCGAAATTCGTGGCAAATTTCCAGACTACTCCAACCGCAAAGTAATTTGCGCGTTCTGTATGCGCAGGTTTTGGTCAGCCGAAGATTTACGGAGACATATGCGAACTCATACTGGTGAACGTCCATTTAGTTGCGACATATGCAAACGAAGATTTACACTAAAACATAGCATGTTACGTCATAGAAAGAAGCACAATGTTAACTTTGAACAAGACGCTAATGTTAGCGATGAAGAGGGTAATAATGGTTCTTCTCCTACTTACACTAAGAATGAAGTTAATCATACTCAAAAAACTGACGAGTCGGACGGTGCTGAAGGTGTTGACTTGATCAGCAACCTGTTAGGTTTAAGAGATAGGTCGATTATTGACAAGGTTTTAGCTGCTTCCGCAGATGATGCAGCTAAACTTTTGGGAGTGAAGAATGGAGTTAGAGAGTAA
Protein Sequence: MQGAALVPHNPQQGFAPPSGPIVSDMESPSSPNDITKETANRSDSGIFSCTTNTTIDQTDSSKTFDSGDNRSDCSSPERKYFCPICEKMLTSQHKFTLHIRSHNNENEVQDSEKGFTCRICSKVLSSNSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRTHSQRNESSYESDGSIDSGSSKSTEFNNNKIEKNKRKHESNDTSEKKPRLDLEINIPQTFQCPVCERSDFNSATNLEAHLEDNHPDYPTKCHICKENFVNSKLLSAHKLAVHENSTNKQTVIGFEDLTFVDFSSKKFPHIARRECEMNLHKASSGLKFQCKHCNRAFPCTNSLSIHESNCSSPVSLKNIDHNIISQPDIRRMEFFNRLNLVDNSPEKQSLTSFTSNKLREHLARAVDNTKDLADIQSILSNINLQKLQTDQADLQQHTPIKQNLDNSLDYQKTEEEESQDLFAVEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYHCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNEELNKLVSKDDTKKISTPTEEKVSFVTPKFSELLHNNTNKLKSEIYQEMSNVNTKPFSNINDTIRNDNLRSLKLQNDVPYVTAFPRNFSNKIQVKDLNALKNTYGNDSEEEEDYIEEEEEQPLDLVLDLSKKTHERTEKNVEDQPQDLTKKASLPVQQQLPPNMSQIFAQHILKAPPKIDPAALYATQLALYRSGFPLPSWPGFSLNPLLFSVPPPLPQNSTQELKERMQRFQLCGGSMISEEVKNLQNLQRPFPVSPPYPNDFRVESKPEILLENNFSTPKKSEELKPLSLNIDPNFHDNLNKLQSPIPPNKPDLMHSPNAVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSAVGTPGKKPQVGIKSTYCDLSIPNPSYDFCKYQKFEDTKELMNEKLKYSLLSQQLSRSDYKKEDDEDCALIIDEIEEKIDSKTEENGHVEENKADIKTNKAEESPDLVPVSRLLDNASQQQFKEFFKREGEEHEVGLASEEDEEGLVASGSTSEGNISGTDENRSESEIVQPAKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNTATTIPNDIQNNTNYLMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKLPKNEWEKPPSYKLPESIQNSDLPYKCHLCEGSFSERQDALDHIKDKHSSEYELLMSKNALECNPPPLEDQSNIDDDDIEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICKRRFTLKHSMLRHRKKHNVNFEQDANVSDEEGNNGSSPTYTKNEVNHTQKTDESDGAEGVDLISNLLGLRDRSIIDKVLAASADDAAKLLGVKNGVRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00026305;
90% Identity: -
80% Identity: -