Basic Information

Insect: Hermaeophaga mercurialis
Gene Symbol: -
Assembly: GCA_951812935.1
Location: OX638358.1:51339656-51342262[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.0043 0.51 11.8 0.8 3 23 77 97 75 97 0.97

2 22 0.0016 0.19 13.2 6.3 1 23 103 125 103 125 0.98

3 22 6.5e-06 0.00077 20.7 1.0 1 23 131 153 131 153 0.98

4 22 2.1e-07 2.4e-05 25.4 1.1 1 23 159 181 159 181 0.99

5 22 0.00016 0.019 16.3 5.1 1 23 187 209 187 209 0.98

6 22 8e-05 0.0095 17.2 0.4 1 23 215 237 215 237 0.97

7 22 0.00012 0.015 16.6 0.5 1 23 243 265 243 265 0.98

8 22 9.3e-06 0.0011 20.2 2.1 1 23 271 293 271 293 0.98

9 22 0.00051 0.06 14.7 3.8 1 23 299 321 299 321 0.99

10 22 2.3e-05 0.0027 18.9 5.3 1 23 327 349 327 349 0.99

11 22 6.6e-05 0.0078 17.5 1.9 1 23 376 398 376 398 0.98

12 22 1.4e-05 0.0017 19.6 5.3 1 23 403 425 403 425 0.98

13 22 0.00062 0.073 14.5 3.4 1 23 589 611 589 611 0.99

14 22 0.14 17 7.0 4.5 1 23 617 639 617 639 0.92

15 22 8.5e-05 0.01 17.2 0.2 1 23 645 667 645 667 0.98

16 22 2.1e-07 2.4e-05 25.4 1.9 1 23 673 695 673 695 0.98

17 22 1.6e-05 0.0019 19.4 2.0 1 23 701 723 701 723 0.98

18 22 8.6e-05 0.01 17.1 3.8 1 23 729 751 729 751 0.98

19 22 1.9e-05 0.0022 19.2 3.1 1 23 757 779 757 779 0.97

20 22 2.1e-05 0.0024 19.1 0.8 1 23 785 807 785 807 0.96

21 22 7.4e-06 0.00087 20.5 6.2 1 23 813 835 813 835 0.98

22 22 4.4e-07 5.2e-05 24.4 3.2 1 23 841 864 841 864 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.0043	0.51	11.8	0.8	3	23	77	97	75	97	0.97
2	22	0.0016	0.19	13.2	6.3	1	23	103	125	103	125	0.98
3	22	6.5e-06	0.00077	20.7	1.0	1	23	131	153	131	153	0.98
4	22	2.1e-07	2.4e-05	25.4	1.1	1	23	159	181	159	181	0.99
5	22	0.00016	0.019	16.3	5.1	1	23	187	209	187	209	0.98
6	22	8e-05	0.0095	17.2	0.4	1	23	215	237	215	237	0.97
7	22	0.00012	0.015	16.6	0.5	1	23	243	265	243	265	0.98
8	22	9.3e-06	0.0011	20.2	2.1	1	23	271	293	271	293	0.98
9	22	0.00051	0.06	14.7	3.8	1	23	299	321	299	321	0.99
10	22	2.3e-05	0.0027	18.9	5.3	1	23	327	349	327	349	0.99
11	22	6.6e-05	0.0078	17.5	1.9	1	23	376	398	376	398	0.98
12	22	1.4e-05	0.0017	19.6	5.3	1	23	403	425	403	425	0.98
13	22	0.00062	0.073	14.5	3.4	1	23	589	611	589	611	0.99
14	22	0.14	17	7.0	4.5	1	23	617	639	617	639	0.92
15	22	8.5e-05	0.01	17.2	0.2	1	23	645	667	645	667	0.98
16	22	2.1e-07	2.4e-05	25.4	1.9	1	23	673	695	673	695	0.98
17	22	1.6e-05	0.0019	19.4	2.0	1	23	701	723	701	723	0.98
18	22	8.6e-05	0.01	17.1	3.8	1	23	729	751	729	751	0.98
19	22	1.9e-05	0.0022	19.2	3.1	1	23	757	779	757	779	0.97
20	22	2.1e-05	0.0024	19.1	0.8	1	23	785	807	785	807	0.96
21	22	7.4e-06	0.00087	20.5	6.2	1	23	813	835	813	835	0.98
22	22	4.4e-07	5.2e-05	24.4	3.2	1	23	841	864	841	864	0.98

Sequence Information

Coding Sequence: ATGGAAGAATCAAAGAACATTAAAAACGAATATACAACCACCCACAATCCAGATGAAATTTCTAAAACCCAAGAAGCCTTAAAAGTCGAAGAATTTGACAAAACCTACGTTAAAGCCgaagatgaaataaataaatccgaaaataatgtaaaaaatattataaaatcagACGATGACAGTGACGAAGATGACAAGAGTAAAAGTAgtcataaaaagaaaaaatatggttGTACCTTATGTTTCGCAAGTTTTGACAAAACCGTCCTCCTTAAAAGGCATTTACGATCCCAtccagaagaaaaaaaatacagatgCAACTCTTGCAATCGTAGTTTCGGCCATTTTGGACACTACAAGCGGCACATGGTCAGTCACACTAGCGAAAGAAATTACATTTGCGAAATTTGTAGCAGCAGCTTCCGCCAcgaagataatttaaaaagacataTATTAATTCATACcggagaaaaaaattatagatgtGCTACATGTGGAAAAGCTTTCACCCAAAGCTCTTCACTTAAACAACATTACATCACTCATAATGGagagaaaaaattcaagtgtgAAACTTGTAAAAAGTGTTTTAGCAGGATGAATGCTTACAAGAAACATTTGTTGATTCACACTGGCGAGAAGAAgtttaattgtaatatatgtGGGAAAGCTTTCTATGGAAAACGAGATGTTATTCGTCATAGGGTTACGCACACAGGAGAAAAGAATTACATTTGTCCAATTTGTGGTCATGGTTTCGGCCACGAAAATTCCTTAAGAATGCACCTTCTTATACATTCCGGAAAAAGAAAACACAAGTGCAACATTTGCGAAAAGTCTTTCTTCACTAACGCAGCTTTAAAATCGCACCAAATAAGTCACACAGGCGAGAAGAACTACAAATGTGAAATTTGCCATAATAACTTCGCTTATCTAAACACTTACAAGAAGCACATGCTAACTCATACCGGCGAGAAAAAGTATAAATGCCACATTTGTGAAACCGCATTCACTCAAAGCTACTGTCTTTCAAGGCATCTCAAAATTCACACTAGGGAAAACTCTACTTCGAAAATTCGCGAACGTGAGAAAACTGAAACTCTAATAACTCGTCCAGgtgagaaaaattttaaatgtgaaatttgcgGCAGCACTTACGcccatctaaaaaattataaaaggcaCTTACTAGTCCATACCGAAAAGAAATTCAAGTGCAGTATTTGCGATAGGGGCTTCACAAGAAGTTTTTGTCTAAAAAGGCATTACAAAATCCATATTACCGAGAAGAAATCTGAGGCACCGACAGCTCCAAGTGCACCACCAGGTGCATGTGCACCAACAGATGATTTAATACTACAGAACAGTCCACAGcttgtaaaaatagaaaatgttccaATAAACAACTATGTCGAAGCATACAACCAGTCAGTAGAAGAGAACAATGTTGAAGTAGACGTTAAAACTACTTCAAGAAATGACTGTGACTCTCAACAAAATACAGACTGGTCTACAGATATAAACTCAAATTCACAGGATAGTTTCTTATTTACTATGGATAATTATGGTTCgaatgataatgatgatgatgatgataaagaTGATACCTTTGAAGAATACGAAAAAAATGAAACTGAAAATGAAGCTGCTAATGAAATAATTCCTGAAGAAGTTACGTCTGAAAATGCAAACTCAAATCCTGACGACATAGAAGTGGATATCAAGAAGTTATTAAATTACGAGTACGCAGAAGATGGTAAAAAGAAGTATACGTGTACCTTATGCTTCGCAGAATTTGATAAAACAGTCCATCTTAAAAGACATCTTAGAACTCATCcggaaaaaaagaaatacaaatgcATTGCTTGTAATCAGAGTTTCGGTCACTTCGGGCATTTTAAACGACACGTTCTGACACATACcggtattaaaaattatatctgtgAAGTATGCAGTAAAGGATTTCGATTAGAAGACACCTTAAAGAAACATCTTCTGATTCATACGggagagaaaaaatataaatgcacaatttgtgaaaagaCCTTTACTCAGAGCTCCACTCTAAGACAGCATCTTGTAACTCACACAGGTGAAAAGAAGTACAAATGTAACACTTGCAATAAGAATTTTGGACAAGTAAGTAACtataaaaaacacttgttaATACATACTGGGGTGAAGAAATTCAAGTGTAACTTCTGTGATAAGGCCTTTTACGATACGGCTTGCTTAAAACGTCACAGATTAATACATACTGGCGAAAAGAACTTTATGTGTAACATCTGCAATAGAAGTTTCAGCAGAGAAAAATGCCTGAAGAGCCACCAAGCGATTCACACCGGAGAGAAGAAATATAAATGCCCCGTTTGCGAGAAATCCTTCTTCACTTACTCCGGCTTAAAAAGCCACGAAATAAACCACACGGGAGAACAAAAATATCAGTGCGAGACGTGTAACAAGTGTTTCATTCACAAGAGCAATTACAAAAAACATCTGGCGATTCATGATGTCGATAAAAAGTTTAAGTGTCCGGTTTGTAATAAGGGATTTTATCGTAGTGATCATTTAAAGAAGCATCTAATGCGAATGCACGGAAGGgctgaataa
Protein Sequence: MEESKNIKNEYTTTHNPDEISKTQEALKVEEFDKTYVKAEDEINKSENNVKNIIKSDDDSDEDDKSKSSHKKKKYGCTLCFASFDKTVLLKRHLRSHPEEKKYRCNSCNRSFGHFGHYKRHMVSHTSERNYICEICSSSFRHEDNLKRHILIHTGEKNYRCATCGKAFTQSSSLKQHYITHNGEKKFKCETCKKCFSRMNAYKKHLLIHTGEKKFNCNICGKAFYGKRDVIRHRVTHTGEKNYICPICGHGFGHENSLRMHLLIHSGKRKHKCNICEKSFFTNAALKSHQISHTGEKNYKCEICHNNFAYLNTYKKHMLTHTGEKKYKCHICETAFTQSYCLSRHLKIHTRENSTSKIREREKTETLITRPGEKNFKCEICGSTYAHLKNYKRHLLVHTEKKFKCSICDRGFTRSFCLKRHYKIHITEKKSEAPTAPSAPPGACAPTDDLILQNSPQLVKIENVPINNYVEAYNQSVEENNVEVDVKTTSRNDCDSQQNTDWSTDINSNSQDSFLFTMDNYGSNDNDDDDDKDDTFEEYEKNETENEAANEIIPEEVTSENANSNPDDIEVDIKKLLNYEYAEDGKKKYTCTLCFAEFDKTVHLKRHLRTHPEKKKYKCIACNQSFGHFGHFKRHVLTHTGIKNYICEVCSKGFRLEDTLKKHLLIHTGEKKYKCTICEKTFTQSSTLRQHLVTHTGEKKYKCNTCNKNFGQVSNYKKHLLIHTGVKKFKCNFCDKAFYDTACLKRHRLIHTGEKNFMCNICNRSFSREKCLKSHQAIHTGEKKYKCPVCEKSFFTYSGLKSHEINHTGEQKYQCETCNKCFIHKSNYKKHLAIHDVDKKFKCPVCNKGFYRSDHLKKHLMRMHGRAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00792648;
90% Identity: iTF_00792648;
80% Identity: iTF_00792648;