Basic Information

Insect: Hermaeophaga mercurialis
Gene Symbol: SCRT1
Assembly: GCA_951812935.1
Location: OX638362.1:5225223-5246500[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00046 0.98 10.4 0.6 15 38 269 289 263 295 0.86

2 5 0.044 93 4.1 0.6 18 28 303 313 292 328 0.80

3 5 0.0055 12 6.9 0.3 17 28 328 339 319 351 0.80

4 5 0.00025 0.52 11.3 0.4 19 41 358 377 346 379 0.88

5 5 0.032 69 4.5 1.6 14 43 381 407 377 408 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00046	0.98	10.4	0.6	15	38	269	289	263	295	0.86
2	5	0.044	93	4.1	0.6	18	28	303	313	292	328	0.80
3	5	0.0055	12	6.9	0.3	17	28	328	339	319	351	0.80
4	5	0.00025	0.52	11.3	0.4	19	41	358	377	346	379	0.88
5	5	0.032	69	4.5	1.6	14	43	381	407	377	408	0.88

Sequence Information

Coding Sequence: atgccGCGTTGTCTTATGGCAAAAAAGTTTAAGGCCTACACTTGGCCGACGGAGAGGATGGACGCTcctgaagaggaagaagaagaaattgacGTCGTCGGAGATTCGCCAGCAACGGCGACCTCTTGCTGGGGTCCCTCCAGCCCCACCGAGGGGGCCACAGCGCCCAGCCCCCCGCCCACTTCGCCACACGGGACTACTTTACTATACAATGgttATCTTCACGAAATTTCACCTTCAAACTACACAACTTTCGTTCCAAAATCTGAGATATCTAGTCAACCACAACAATCTTACGTGACTCTAAGGACCGCCGAAGAAAACAACGACGTACGGTATGAGTACACTACATCTAGTCCAGTTCCTACGAAACATAAAAAATCTTTAGCAATGACTTATACCAGTACCGGAACGGCGTTAAGTTTACCTCCAAAGAAAAAAGACATATACAGACCTTATTCTTTGGATGATAAACCAACTCCACCTTTTTTCCATCACGCCATAAGGGTACCCGCTGAAGAAGATCTCCATGCGGCTCACGCCATTCTAGATCTAAGCGCTTCTACAACGGTCTTTTTACCTCCACCGCAAATCCAAATACAAGAGCAGCATCACCCGATCGAAATTTCTCAAGAAGTCCAAGAAACAAATCTAACGCAGCCCATTCGAGAAGCGACTCCTGGTGTTGCACCTGCGAAGACGGTCGCCTACACCTACGAAGCCTTTTTTGTCAGCGACGGCAGATCGAAAAAGAGGAATGACTCAGAAGATCTGGTAGCCGCTGTTAAAAGCCCGCCTGAGAAACCAAAGTATACGTGCAGCGAGTGCGGGAAACAATACGCGACATCCAGCAACCTGTCCAGGCACAAACAGACCCACCGCAGCCTGGATTCGCAGGCTGCGAAAAAGTGTATGACGTGTGGGAAAGCCTATGTAAGCATGCCCGCCTTGGCGATGCACGTTCTTACACACAAGTTAGCGCACCGGTGTGGGGTGTGCGGGAAGCAGTTCTCAAGGCCTTGGTTGCTGCAAGGTCATCTTAGGTCTCACACCGGGGAGAAGCCTTACGGTTGCGCACACTGCGGGAAGGCTTTCGCTGATAGGTCGAACCTTCGGGCGCACATGCAGACCCATTCCGCAGACAAGAACTTCGAATGTCCCAGGTGCCACAAAACCTTCGCACTTAAGTCTTACTTAAATAAGCATTTGGAGTCGGCTTGTCTTAAGGAAGAAGTTTTAACTACTGCGAGTTGCAAGGAAGAGCAAAAAGAGATGACTTTGGCCGCGCCTGTACCGGTGAGAGTTTACGCGGGCTGA
Protein Sequence: MPRCLMAKKFKAYTWPTERMDAPEEEEEEIDVVGDSPATATSCWGPSSPTEGATAPSPPPTSPHGTTLLYNGYLHEISPSNYTTFVPKSEISSQPQQSYVTLRTAEENNDVRYEYTTSSPVPTKHKKSLAMTYTSTGTALSLPPKKKDIYRPYSLDDKPTPPFFHHAIRVPAEEDLHAAHAILDLSASTTVFLPPPQIQIQEQHHPIEISQEVQETNLTQPIREATPGVAPAKTVAYTYEAFFVSDGRSKKRNDSEDLVAAVKSPPEKPKYTCSECGKQYATSSNLSRHKQTHRSLDSQAAKKCMTCGKAYVSMPALAMHVLTHKLAHRCGVCGKQFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSADKNFECPRCHKTFALKSYLNKHLESACLKEEVLTTASCKEEQKEMTLAAPVPVRVYAG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00056784;
90% Identity: iTF_00792467;
80% Identity: iTF_00792467;