Basic Information

Insect: Hemithea aestivaria
Gene Symbol: -
Assembly: GCA_947507615.1
Location: OX382349.1:10499296-10510426[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0037 0.29 12.3 0.1 3 23 358 379 357 379 0.93

2 19 8.6 6.7e+02 1.7 0.4 2 23 383 404 382 404 0.85

3 19 9 7e+02 1.6 0.5 1 23 409 432 409 432 0.90

4 19 0.0068 0.53 11.5 0.4 2 23 489 510 488 511 0.95

5 19 0.0063 0.49 11.6 1.5 1 23 517 540 517 540 0.96

6 19 0.67 52 5.2 0.3 2 19 545 562 544 564 0.93

7 19 4.3 3.3e+02 2.7 10.7 1 23 573 596 573 596 0.96

8 19 0.091 7.1 7.9 2.0 1 23 600 623 600 623 0.89

9 19 0.0085 0.66 11.2 4.0 2 23 635 656 635 656 0.98

10 19 4.6 3.6e+02 2.5 0.4 1 23 663 686 663 686 0.92

11 19 0.0026 0.2 12.8 0.5 1 23 691 712 691 712 0.97

12 19 0.5 39 5.6 0.3 2 22 719 739 718 739 0.92

13 19 0.025 1.9 9.7 0.4 2 23 746 768 746 768 0.97

14 19 0.0011 0.085 14.0 0.3 1 21 774 794 774 795 0.96

15 19 0.071 5.5 8.3 0.1 1 23 813 836 813 836 0.97

16 19 0.022 1.7 9.9 0.3 1 21 842 862 842 863 0.94

17 19 0.46 36 5.7 2.5 2 23 869 890 869 890 0.97

18 19 0.0012 0.095 13.8 0.6 1 23 896 919 896 919 0.96

19 19 0.0021 0.16 13.1 1.2 2 23 925 947 924 947 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0037	0.29	12.3	0.1	3	23	358	379	357	379	0.93
2	19	8.6	6.7e+02	1.7	0.4	2	23	383	404	382	404	0.85
3	19	9	7e+02	1.6	0.5	1	23	409	432	409	432	0.90
4	19	0.0068	0.53	11.5	0.4	2	23	489	510	488	511	0.95
5	19	0.0063	0.49	11.6	1.5	1	23	517	540	517	540	0.96
6	19	0.67	52	5.2	0.3	2	19	545	562	544	564	0.93
7	19	4.3	3.3e+02	2.7	10.7	1	23	573	596	573	596	0.96
8	19	0.091	7.1	7.9	2.0	1	23	600	623	600	623	0.89
9	19	0.0085	0.66	11.2	4.0	2	23	635	656	635	656	0.98
10	19	4.6	3.6e+02	2.5	0.4	1	23	663	686	663	686	0.92
11	19	0.0026	0.2	12.8	0.5	1	23	691	712	691	712	0.97
12	19	0.5	39	5.6	0.3	2	22	719	739	718	739	0.92
13	19	0.025	1.9	9.7	0.4	2	23	746	768	746	768	0.97
14	19	0.0011	0.085	14.0	0.3	1	21	774	794	774	795	0.96
15	19	0.071	5.5	8.3	0.1	1	23	813	836	813	836	0.97
16	19	0.022	1.7	9.9	0.3	1	21	842	862	842	863	0.94
17	19	0.46	36	5.7	2.5	2	23	869	890	869	890	0.97
18	19	0.0012	0.095	13.8	0.6	1	23	896	919	896	919	0.96
19	19	0.0021	0.16	13.1	1.2	2	23	925	947	924	947	0.93

Sequence Information

Coding Sequence: ATGCGTTACGCATCGACACCCCACGCTGGGGGGCGCGGGGCGGTATGTGGGACTTCCCCGCCGAAGATGGGCGCGGCGGGGATACCCACTAAACAACCTGGGGGTGTTCCTGCGGAACGCCATAATGCCGGGGCAACGGATCAGCAAGCTCAGGAAATAACCTCAATAGACCACGATCACAATTATCACGTGAGAACTTTAATTGGTATATGTTTTTGGCCAGAAGAAATACCAGTAGAAACCGAACCTTGGTTAGAGAAACCAAAATATGTAACAAGAGGCACATTAAACAATGATGACGGGATAAATGAACCGATGATGAATCTGATGATGAATGATGATGATAGAGAACAGTACATTGTGATTGGTGCTAATGTCACTAGAGATCCATTACCAGAAGAGAACCCTCGTTCAGAAGGAAACTCAAGGCCAGTCCTGCATCACGTGGGCTTCCTCAAACAGAAGCTTGTGTCAATCCTGTACTGCGAGCAGTTCTGTGCTCTCTGCTGCGACTCGGACAAGCCTCTCAAGCTACTCCGGGAACAAATACTCATCATCACTGACAACTGGACGCAGACTACTACACTCAAACAACTCTACCAATATGTTTTACATCAGAATGCAGATCCAGCAAGTAAATACATATGTACAGATTGTTCAGAACAATTGAAACAATCGTACATTTTCATAAAATACTCCAAACTAACGACAAAACTCCTAGAGTCGTACATCAATGACTTGAAAATAATGTCCGAAGAGGATGAACATAATATGGTCGCTAATTACATTGAAAAAGATAACTTTAGGTTTACCGTCATGTTACTGAAAGGGCAGCAAGTGCAGAAATATTTACCTAATGAGAAAAAACAGAAGAATGAAAATATAGAAATTACAAAGAACAATTTTGACGTAACACACACAACTTTTATGAGTCAAAAAGATACTGGAATTCCGGAAACTGCCAACACAATAGAAGCCGAACTGAGTACATTAGAAACTCCTGAAGAAACATTTGAACCAGAACCTATTGTAACCACAAAACGTAGAATAAGACCTGAACCGAATATATTGTGTGAAATATGCTCAAAAGCATTCACTATTCAGAGCGAATTGTTAGAACATTACACTCTGATTCACTTAAAAGTCCGCTGTAAAATCTGTACTACATTAATTGACGAGAAAGATTTCCAACAACATTTATCAACGGAACATAAAAACGAAGTTTTCTTCTGTGAATTATGTGTTCGGCCATTTTATTGTTGGGCAAGTGTGATCATACACAATAGAATTATGCACGAAAATTATGATGCCGCTATATGTGTGCTTTGCGCGGGTAATTATGGCGACGATCACGAACATCCGGAACTCAATTGCCCAGACTGTGGCAATATGTTATCATGTATTCATAAAAAATACTTGTATTTAATCATGGACCACAAACTCAATCACAGAAATGCAAAAGTAAAGTGTCCGGATTGCGACTACGTCACCAGATGGAAGGCTGGGTTACTGAGGCACGTTAACAAACACCACCTGAAACGCGATCTTTATATTTGCTCGCAATGTGGGAAGCAGTTTTTCGACAAAAAAGCTATGGATGAGCACAATAGGAAGTATCACTCTAGTGTGTTGTATTGTTCATATTGCGAGTGCGTGTGCTCGAGTGTCGGGGCGCTGGCGGCGCACGAGGCAGACTGTAGCGCAACAACACGAGCGCACTGCTGCCAATACTGCGCGGCTTCCTTCCACACATTCAAACTGCTGCAGAAACACCACAACACCCGCCACAAGGAGACATTCCCCTGCAACTTCTGCAACAAAGTGTTACAAACAGAACAGTATAGAAGACATCACATAAACAGTGCACACAGTCTTGTGCAAAAGCCAGTAAGTAATAAAGCCACGTGTAAAATGTGTCACGATGTTTTCGATCTGAGGAGTGAACTGACACATCACATGAAGATACATCAAGGTCCCGATGCCAAATACAATTGCAAGCCGTGTGACACTGAGTTCGAAAGTTTGGAGATACTCCAATCGCACAATAAGAGCCAGCATGAAAACGCTACCTATGTTTGTAACATTTGCGGTAAAAAGATTAGCAAGACGTGGTTGAAACAACACTTACAAGACCACAAATACGATGCTAAATTGAGTTGTGAAAATTGCGGGAAGGACCTCCCTAATATCAAGCGGTATCAGCGTCACAGTAGGACATGTGACAACGCATCTCGCAAGTGCAAGTTGTGTCCCCACGTCGGATCCAAACCTGCGTATTTAGAAGCTCATGTGAATAAATTCCATCTCAATATTAGACCGTATGTATGCGACACGTGCGGGACAGGATTTCACGGGAAGCATTATTTGGTGGCTCATATGAAGATATGTCAGAATAAGGCTGGTGACAATATCAAGCGACTTCCGCGTTACAAAAAGTACAAGTGCACATTATGTCCCTACGCTGGTGTGCTTCGTGAGAATTTAGATACTCACGTGAACAGAGTCCATGCCAAGATTAAACCGTATGCATGTGATAAGTGCGACAGACGGTATCACGGCAAGCCGTATCTGTGGGCTCATAAGAGGATATGTCAGAACAAGCCTCGCTGTGACGTGTGCAACAGAGAAATGTGTTCCATGGACAGTTTGAAGATTCACAAGAACAGTCACGTGGCCGAGAAACAATTCAAGTGCGAGGAGTGCGGCAACATGTTTGTGTCGGCCGAGGCGAGGAGGAGGCACTACAACAACAAACATGCTCCCAAAAACATCCCATGCTCGCACTGTCCCATGAAATTTGCCACCTTGGGAAAACTTCAATGGCATATTGATAATTGTCATCAAACTGTTATAACCTTGAATGAGATTTAA
Protein Sequence: MRYASTPHAGGRGAVCGTSPPKMGAAGIPTKQPGGVPAERHNAGATDQQAQEITSIDHDHNYHVRTLIGICFWPEEIPVETEPWLEKPKYVTRGTLNNDDGINEPMMNLMMNDDDREQYIVIGANVTRDPLPEENPRSEGNSRPVLHHVGFLKQKLVSILYCEQFCALCCDSDKPLKLLREQILIITDNWTQTTTLKQLYQYVLHQNADPASKYICTDCSEQLKQSYIFIKYSKLTTKLLESYINDLKIMSEEDEHNMVANYIEKDNFRFTVMLLKGQQVQKYLPNEKKQKNENIEITKNNFDVTHTTFMSQKDTGIPETANTIEAELSTLETPEETFEPEPIVTTKRRIRPEPNILCEICSKAFTIQSELLEHYTLIHLKVRCKICTTLIDEKDFQQHLSTEHKNEVFFCELCVRPFYCWASVIIHNRIMHENYDAAICVLCAGNYGDDHEHPELNCPDCGNMLSCIHKKYLYLIMDHKLNHRNAKVKCPDCDYVTRWKAGLLRHVNKHHLKRDLYICSQCGKQFFDKKAMDEHNRKYHSSVLYCSYCECVCSSVGALAAHEADCSATTRAHCCQYCAASFHTFKLLQKHHNTRHKETFPCNFCNKVLQTEQYRRHHINSAHSLVQKPVSNKATCKMCHDVFDLRSELTHHMKIHQGPDAKYNCKPCDTEFESLEILQSHNKSQHENATYVCNICGKKISKTWLKQHLQDHKYDAKLSCENCGKDLPNIKRYQRHSRTCDNASRKCKLCPHVGSKPAYLEAHVNKFHLNIRPYVCDTCGTGFHGKHYLVAHMKICQNKAGDNIKRLPRYKKYKCTLCPYAGVLRENLDTHVNRVHAKIKPYACDKCDRRYHGKPYLWAHKRICQNKPRCDVCNREMCSMDSLKIHKNSHVAEKQFKCEECGNMFVSAEARRRHYNNKHAPKNIPCSHCPMKFATLGKLQWHIDNCHQTVITLNEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00791542;
90% Identity: iTF_00791542;
80% Identity: -