Haes010221.1
Basic Information
- Insect
- Hemithea aestivaria
- Gene Symbol
- -
- Assembly
- GCA_947507615.1
- Location
- OX382337.1:16643679-16648559[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-11 2.1e-08 34.3 0.0 4 39 170 206 167 210 0.89 2 4 2.8e-12 2.9e-09 37.1 0.4 2 39 222 259 221 262 0.93 3 4 2.7e-15 2.8e-12 46.7 0.1 2 45 277 321 276 321 0.96 4 4 2.1e-17 2.1e-14 53.5 0.0 1 43 328 371 328 373 0.93
Sequence Information
- Coding Sequence
- ATGCCCGGAAACGGATCGACTCAAGTGAAATGCGAGCCACAGTCGGATGAAGAAGACAGCTGCCCTAAACTATCCGATATATTCCTCCATCAGTCTGAATATAGTTTTGTGAAAGTTGAAGTTTCAAACTCGCAGAACGATGGAAGCTCTTCATTGTTGCAGCATTTACAAGGAAGTGGCTTGGAAGAGCTGGCACCGCTGGCGCCGGCGGGCCCGGCTGCCACTCCGGTCTCCGTGAAGCAGGAACCGAGCGACACTCCTGCTATTGTCCTGGAGACTCTGGAGTCTGCTCCACATAATATGGGTTGTTCATTATTGAAAAGACACATGGCCATGTTAAATTCATCAGAAAATGCTGACTCGGCTAGCTTTACACCTCTTCTTGCCATCAAAGATGAACCGTCGTCGGAAGGAGAGTTGCAGAATTTAAGTAGTGATGAGACGAGCGACTCATGCCGTGACATGGAGCCGTCCACTCGAGGTAGTCCCAAGAGCTGGACTCAGAAAGATATGGACAGTGCCCTCGATGCTTTGAGGAATCATCACATGAGCTTAACTAAGGCGTCCACAACGTACGGCATTCCATCGACAACTCTCTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCGAAGAAGGAAGGCTCCACCAAGTCCTGGTCGGAAGCAGACCTCCGCGCCGCGCTGCATGCCTTGAGAGCCGGAGCCATCTCGGCTAATAAGGCTAGTAAGGCTTATGGCATCCCGAGCAGCACGTTATACAAGATAGCGCGTCGCGAGGGCATCCGTCTCGCGGCGCCGTTCAACGCGGCGCCGGTGGCGTGGCGGCGCGGCGACCTGGCGCGCGCGCTCGCCGCCATCCGCGCCGGCGCAGCCTCCGTGCAGCGCGCCGCACTGCAGTACGGGATACCTACTGGTACGCTCTATGGCCGGTGTAAAAGAGAAGGCATCGAATTGTCTCGCTCCAACCCGACGCCATGGTCTGAAGATGCTATGGGAGAAGCATTAGAAGCTGTCAGGATAGGCCAAATGTCTATAAACCAGGCAGCCATACATTACAACCTGCCATATTCCTCTCTCTACGGACGTTTCAAAAGATGTAAATACATAGCACAGAACCCTCAATTCCCCCAACAAGGTCCAGAAATGATCCAAAGCCAAGATCAATACTATCATAACATGCATCAACAAGAAGATAATGTTGCTCAGAACTATGTCCAAAACGACTACCTGCCCCACACGTCACAGAATATGATGCAAGACTATAACCAAGCTATGTATTACAACCAAAACTTCAGCAGTATTGCCACTAGCTGA
- Protein Sequence
- MPGNGSTQVKCEPQSDEEDSCPKLSDIFLHQSEYSFVKVEVSNSQNDGSSSLLQHLQGSGLEELAPLAPAGPAATPVSVKQEPSDTPAIVLETLESAPHNMGCSLLKRHMAMLNSSENADSASFTPLLAIKDEPSSEGELQNLSSDETSDSCRDMEPSTRGSPKSWTQKDMDSALDALRNHHMSLTKASTTYGIPSTTLWQRAHRLGIDTPKKEGSTKSWSEADLRAALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVAWRRGDLARALAAIRAGAASVQRAALQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKYIAQNPQFPQQGPEMIQSQDQYYHNMHQQEDNVAQNYVQNDYLPHTSQNMMQDYNQAMYYNQNFSSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00790172;
- 90% Identity
- -
- 80% Identity
- -