Hchr021024.3
Basic Information
- Insect
- Hemistola chrysoprasaria
- Gene Symbol
- Lztr1
- Assembly
- GCA_947063395.1
- Location
- OX346729.1:4759194-4777343[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.8e-16 9.1e-14 52.2 0.0 4 108 254 394 251 396 0.88 2 6 0.5 1.6e+02 3.2 0.1 78 108 396 426 393 428 0.88 3 6 5.8e-07 0.00019 22.3 0.0 11 44 492 524 487 537 0.86 4 6 7e-06 0.0023 18.8 0.0 13 44 602 632 596 645 0.84 5 6 8.9e-14 2.9e-11 44.2 0.0 13 96 710 793 704 808 0.85 6 6 1.6 5.1e+02 1.6 0.0 77 105 808 836 797 840 0.81
Sequence Information
- Coding Sequence
- ATGTTCATATTCGGTGGGTACACGGGCGATATCTTAGCAAACTCCAACCTGACCAATAAGAATGACCTTTATGAGTACAGATTCTCAAGCTGCACTTGGATTAAATGGACCTTTCAAGGACAAGAACCAGTACCAAGATCAGCCCACGGGGCGGTGGTGTATGACGATAAGCTGTGGATATTCGCCGGTTACGATGGAAACGCGCGCCTTAACGACATGTGGACATGCAGCTTGGTGAGCGAGGTGCATCAATGGGAGCGTATAGAGCAGAAGGGCCAGTGCCCGCCGACCTGCTGCAACTTCCCCGTGTGCGTCGCCAGAGGGAGCATGTTTGTCTTCAGCGGACAGAGCGGCGCTAAGATCACCAACGCACTGTTTCAATTCCACTTCGAAACTCAGACGTGGACGCGAGTGTGCACAGAACACTTGCTCCGTTGCGCCGGGCCGGCTCCGGCGCGTCGCTACGGTCACGTGATGGTGGCGCACACCAGGCATCTGTACGTATTCGGCGGAGCCGCTGATAATACACTGCCCGCCGATGTTTACTGCTTCGACTTGGACACTAAGATGTGGTCTGTAGTCCAGCCGGCAGCAGACTCGCAAGTACCATCAGGTAGATTATTCCACGCGGGCGCGGTGCTCAACGACGGATTCTATATATTCGGTGGAACAGTTGACAATAATGTCAGAAGCGGGGATTTGTACAGGTTTCAGTTGTCAAACTACCCTCGTTGCACTTTACAAGAGGACTTCGGTCGCATTCTCAAATCGCAGCAGTTCTGTGACATTACATTACTAGTGGGCGAGGAGGAAACGCCTATAGTCGCGCATCAAGCTATGTTGGCCGCACGATCGCAGTACCTCAAGGCTAAGATCAAAGAAGCGCGGGAAGATCTAGCTAAACAAATAGAGGAACAAGACGAATCTTCAGAAGGCAGCGATGTGGTTTCTACACCGTTCAAGCTCAATATGCCAGAACTCGTCGTTAAACTACCTGAGGCCACGCCGGAAGCTTTCAAGATGGTCCTCAACTATATCTATACGGATAGGATTGATCCTACTGAGAaagACGAGGACCCGGCGTCCGTCAGCACCGTGTTGGTAGTGATGGAGGTGTTGAGGCTGGCGCTGAGACTGCGCGTGCCGCGGCTGCGCGGGTTGTGTGCGAGGTTCCTGCGCGCGACATTGTGTGCAGCGAACGTTCTGGCAGCCTTGCGGGCGGCACATCACGCACAACTGCCCTGCATTAAGGAACATTGCCTCAGGTTCGTGGTGAAAGACTACAACTTCACTCCGATAGTGATGTCGAAGGAGTTCGAGGAGATGGAACAGAGTCTGATGGTGGAAGTGATCAGGCGGAGACAGCAGCCGCCGACCAAGCAACCTAACGTCGCCCAGGATAATGAAGAGGAGATCACTGGCACGACCCTGGAGCAGGACATGTGCGCGCTGGTGGCGGGCGGGTGCGCGCTCGGCGACGTGCGCCTGCGCGTGGGCGGCGCCGGACGCACCGCGCACCGCTCCGTGCTCGCCGCCAGGGCCGCGTACTTCGAGGCCATGTTCCGCTCCTTCTCTCCCGCCGACAACGTCGTCAATGGCCGCGTACTTCGAGGCCATGTTCCGCTCCTTCTCTCCCGCCGACAACGTCGTCAATGTATGTATACTGACGTCATACTAGACACGTGCGCCTGCGCGTGGGCGGCGCCGGACGCACCGCGCACCGCTCCGTGCTCGCCGCCAGGGCCGCGTACTTCGAGGCCATGTTCCGCTCCTTCTCTCCCGCCGACAACGTCGTCAATACACGTGCGCCTGCGCGTGGGCGGCGCCGGACGCACCGCGCACCGCTCCGTGCTCGCCGCCAGGGCCGCGTACTTCGAGGCCATGTTCCGCTCCTTCTCTCCCGCCGACAACGTCGTCAATGGCCGCGTACTTCGAGGCCATGTTCCGCTCCTTCTCTCCCGCCGACAACGTCGTCAATGTATGTATACTGACGTCATACTAGACACGTGCGCCTGCGCGTGGGCGGCGCCGGACGCACCGCGCACCGCTCCGTGCTCGCCGCCAGGGCCGCGTACTTCGAGGCCATGTTCCGCTCCTTCTCTCCCGCCGACAACGTCGTCAATACACGTGCGCCTGCGCGTGGGCGGCGCCGGACGCACCGCGCACCGCTCCGTGCTCGCCGCCAGGGCCGCGTACTTCGAGGCCATGTTCCGCTCCTTCTCTCCCGCCGACAACGTCGTCAATATACAAATCTGCGACACAATCCCTTCAGAAGAAGCATTCGACTCGCTACTCCGGTACATCTACTACGGCGACACAAACATGCCCACAGAAGACTCCCTCTACCTATTCCAAGCGCCGATATACTACGGATTCACCAACAATAGACTGCAAGTATTCTGCAAACACAACTTACAGAGTAATGTCACACCAGAGAATGTATTAGCTATACTACAAGCTGCCGATCGCATGCGGACTTCGGACATCAAAGACTACGCTCTCAAAATGATTGTGTACAACTTCAAAATGGTCGCAAAACAGGACGCATTAAGAACTTTACCGCAACCTTTACTCGTAGATATACTCTATGCTATAGCTGAAGAGCCCCATTTCGATTTCCACCTGCCCAAGCCGATAGTGCTGCCGACTTCTTCGTCGTCCGATACGTTGAATGAGGAAGGCGATAGGCCGGAAAGGAATGAGAAGCATAAGTGTGGCAAGTCATAA
- Protein Sequence
- MFIFGGYTGDILANSNLTNKNDLYEYRFSSCTWIKWTFQGQEPVPRSAHGAVVYDDKLWIFAGYDGNARLNDMWTCSLVSEVHQWERIEQKGQCPPTCCNFPVCVARGSMFVFSGQSGAKITNALFQFHFETQTWTRVCTEHLLRCAGPAPARRYGHVMVAHTRHLYVFGGAADNTLPADVYCFDLDTKMWSVVQPAADSQVPSGRLFHAGAVLNDGFYIFGGTVDNNVRSGDLYRFQLSNYPRCTLQEDFGRILKSQQFCDITLLVGEEETPIVAHQAMLAARSQYLKAKIKEAREDLAKQIEEQDESSEGSDVVSTPFKLNMPELVVKLPEATPEAFKMVLNYIYTDRIDPTEKDEDPASVSTVLVVMEVLRLALRLRVPRLRGLCARFLRATLCAANVLAALRAAHHAQLPCIKEHCLRFVVKDYNFTPIVMSKEFEEMEQSLMVEVIRRRQQPPTKQPNVAQDNEEEITGTTLEQDMCALVAGGCALGDVRLRVGGAGRTAHRSVLAARAAYFEAMFRSFSPADNVVNGRVLRGHVPLLLSRRQRRQCMYTDVILDTCACAWAAPDAPRTAPCSPPGPRTSRPCSAPSLPPTTSSIHVRLRVGGAGRTAHRSVLAARAAYFEAMFRSFSPADNVVNGRVLRGHVPLLLSRRQRRQCMYTDVILDTCACAWAAPDAPRTAPCSPPGPRTSRPCSAPSLPPTTSSIHVRLRVGGAGRTAHRSVLAARAAYFEAMFRSFSPADNVVNIQICDTIPSEEAFDSLLRYIYYGDTNMPTEDSLYLFQAPIYYGFTNNRLQVFCKHNLQSNVTPENVLAILQAADRMRTSDIKDYALKMIVYNFKMVAKQDALRTLPQPLLVDILYAIAEEPHFDFHLPKPIVLPTSSSSDTLNEEGDRPERNEKHKCGKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -