Basic Information

Insect: Hemistola chrysoprasaria
Gene Symbol: clz9
Assembly: GCA_947063395.1
Location: OX346733.1:4359838-4362474[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.5e-10 6.2e-07 29.7 0.0 2 39 33 70 32 76 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.5e-10	6.2e-07	29.7	0.0	2	39	33	70	32	76	0.88

Sequence Information

Coding Sequence: ATGCTTGACCACTTGCTTTGCTTTGGTGTGGGATCAACGATTGTTGTTTTTTACACAGTCAAGAAGAAAGAAAATGTTAGAAATCTGCGCTACCCAGAGGCGGCCATGCAATCAGCTATAAAAGCAGTTCGCGGAGGTCGTTTCAAGTTAAGAGAAGCAGGACGACATTATGGTGTGCCACACAACACGCTTAGTAACAAATTAAAAGGTGTGGTGCCAGAATCAAGAAAGATGGGTCGTGCGACATATTTAACCGATCAAGAGGAAAaacttttagttttttatatagaAGCAAATGCTAAAAAAGGCATTCCACTAAAACGGTCAACATTAGTTGagacagtaaaaaaaattatcgatGAGGATGGACGCAAAACGCCCTTTAAATGTAACCGTCCGGGGAGAAAATGGGTCGAATTGTTTAAGAAGCGCCACCCGCAGCTAAGTGAAAAGAAGGCGGAGAGCATATCGACAGCACGAGCAAATGTTTCAGAGGATGATCTACGACAATGGTTTGAGTCCGTTAAGCAATATTTAACCGAGGAACAAGCGTTGAAAATCCTTGATGACCCAAAAAGAATATATAACGCAGACGAATCTGGATTTCAAACATGCCCTCAGTCAGGCCGGGTATTAGGGCCTGTGGGAatgaaaaatttttttgagATCAAATCTGGTAAAGAAAAAGAGCAGCTTACTGTCATGGCCTGTATTAATGCCGCTGGCGAAGTTATTTCGCCCATGATAGTGTATCCGTTAGTCCGAATTTCGAAAGACATAGCGTGCAATGTTCCAACAGATTGGGCCTTAGGAAGATCACCTAAAGGTTGGATGACAGGTCCATTGTACTATGAGTACATTGCAAATGTGTTTGATCCCTGGTTAAAAATCCAAAACGTAGAGAAACCGATATTGCTTTTAGTTGATGGCCACCGCTCACATATGACTATGCAAGTATCTGAGTACTGCGCAGAAAATCAAATACTAGTGCACGCGCTTTATCCAAACTCGACGCACATTACGCAGCCCGCAGACGTATCACTTTTTAAGTGTTTAAAAAGTGGTTGGCAAAACACTGTGTTCGAATACAAGCAAAGTACTGGCAATAAGCACATTACTCGTGCTGGATTTGCACCCCTTCTATCCAAAGTATTTCAAGATAAAGTCACACCCCAAATAGTAGCAAACGGTTTTAAACGATGTGGAATATACCCGTTTGATCCTTCAGCAGTAGACTATAGCAAATGTATGGACAATGAAGGGCGAAAAGTTTTACCAATCGCTGCTGAAGTCGGTGTAGAAACAATTCTTATGTTAGAGTCCTTTATGAGGCGCGGCCGGGCGGAACAATTCAGGAGGGCTGAGAATGAAGAATGGCAAGGCGATGAATCCGCAAAAGAATTATTTTATGTGTGGAAGAAGTTCCGTCGGCACTGTTTACAAGAAAAAGATGCTGATGATGTGGTTATTGAAGATAATTTGCACAAACATGGTACTGAAAATGTGTCTCCTAAAGTAAACGAAAAAGAAGGTAGACCCTCACCCTGTCAAGATTGTATGCCCCCGTCTCCTTCCACTATGAAAACACCACCACGGGCGTCACCAACGGACTCCACTACGTGCAGTTCACTGATGTCTCCTGATAAAAATTACCCAAATCCCAAACCATACACGACTCCTGAAGAAAAAGAACAGGAAGCTAGCTCCTTGTTTGATCAAGAGTATTTTCCTCTGAGTCCCTGTATTAATAAAGCACCATCACCAGCTTCAGAAAATAACTCCACTAGGCGTATCTTAGACAAGTctccaaaaaaaaattcatatccACAATCACAGAGTCATGTGTCAATAAACGAGACTCATTTCTCATCGACGAATAAATCTTTAACTGATAAAACAATCGATACGACAAAAACCACCCCCAATTCTAAATTAATACAGATAATGGCACAGAAGCAGAAACAGGTAAGTCCCGCTTTTGGAAATCACCTTCTGTTTCCATCAGATTCACCAATAAAGAAACATACCAAAGAACGTTTGCCTTTAGCCGTTTCATCATCAGCATTTCGGgaatattttaaagtaaaagaaCAAGAGAAAGATAGGAAATCTGAAGAGGTAGAGATAAGAAAAAGAAAACGTGAGGAAATTAGAGCCAAAAAGATTTCAAAAGCACCAAAAGCGAAGAATTCTAAACAACCCATTGAAAGAAAATTGATGAGCAAAAAATCAAGAAGACAAGTTATATGGAGTGACAGTGAAACAGAAAGTAATGAAGATAAGAAATCAGAACAAGACGGGCGGGAAGAAAATGAAAGTTCAAATTCCAATTCCGAGAACATACCTCTCAGCAGAATTTATGCGAATACAAAGAAGCTATCTAAGGGAGactatgtcataataatatacgaaGGGGAATACTTTCCGGGAGTGGTGGAAAGTGTTGAACAGCATTGTTTTGAAATAAGCACAATGACTTTTTCCACGGGAAACACTTTTAGATGGCCCGAGAAACCAGACAAAATATGGTACTCTGAAAAAGATATAGTAGAGCGTATAGATACACCAGTATTAACCAACAGAAGAGGTTTTTATCTGGTAAAAGAAATGTCTAAATTTCTGCCTTTTACTGTTTAG
Protein Sequence: MLDHLLCFGVGSTIVVFYTVKKKENVRNLRYPEAAMQSAIKAVRGGRFKLREAGRHYGVPHNTLSNKLKGVVPESRKMGRATYLTDQEEKLLVFYIEANAKKGIPLKRSTLVETVKKIIDEDGRKTPFKCNRPGRKWVELFKKRHPQLSEKKAESISTARANVSEDDLRQWFESVKQYLTEEQALKILDDPKRIYNADESGFQTCPQSGRVLGPVGMKNFFEIKSGKEKEQLTVMACINAAGEVISPMIVYPLVRISKDIACNVPTDWALGRSPKGWMTGPLYYEYIANVFDPWLKIQNVEKPILLLVDGHRSHMTMQVSEYCAENQILVHALYPNSTHITQPADVSLFKCLKSGWQNTVFEYKQSTGNKHITRAGFAPLLSKVFQDKVTPQIVANGFKRCGIYPFDPSAVDYSKCMDNEGRKVLPIAAEVGVETILMLESFMRRGRAEQFRRAENEEWQGDESAKELFYVWKKFRRHCLQEKDADDVVIEDNLHKHGTENVSPKVNEKEGRPSPCQDCMPPSPSTMKTPPRASPTDSTTCSSLMSPDKNYPNPKPYTTPEEKEQEASSLFDQEYFPLSPCINKAPSPASENNSTRRILDKSPKKNSYPQSQSHVSINETHFSSTNKSLTDKTIDTTKTTPNSKLIQIMAQKQKQVSPAFGNHLLFPSDSPIKKHTKERLPLAVSSSAFREYFKVKEQEKDRKSEEVEIRKRKREEIRAKKISKAPKAKNSKQPIERKLMSKKSRRQVIWSDSETESNEDKKSEQDGREENESSNSNSENIPLSRIYANTKKLSKGDYVIIIYEGEYFPGVVESVEQHCFEISTMTFSTGNTFRWPEKPDKIWYSEKDIVERIDTPVLTNRRGFYLVKEMSKFLPFTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01209156; iTF_01209169; iTF_01209168;
90% Identity: -
80% Identity: -