Basic Information

Insect: Hemicrepidius niger
Gene Symbol: Zfpm1
Assembly: GCA_963082805.1
Location: OY720159.1:48354081-48358488[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.1 6.1e+02 2.3 0.1 2 23 8 29 7 29 0.91

2 14 0.013 1.3 10.8 1.0 1 23 541 564 541 564 0.94

3 14 0.0023 0.23 13.1 2.9 2 23 663 685 662 685 0.92

4 14 3.1 3e+02 3.3 0.6 1 23 693 715 693 715 0.84

5 14 1.8e-05 0.0018 19.7 1.9 2 23 718 739 717 739 0.97

6 14 0.028 2.8 9.7 1.5 1 23 745 767 745 767 0.97

7 14 0.0001 0.01 17.3 5.4 2 23 774 795 773 796 0.95

8 14 0.00029 0.029 16.0 1.6 3 23 834 855 833 855 0.97

9 14 0.056 5.5 8.8 0.0 2 23 871 891 870 891 0.96

10 14 0.00024 0.024 16.2 1.4 1 20 897 916 897 919 0.92

11 14 0.00027 0.027 16.0 0.2 1 23 927 949 927 949 0.99

12 14 0.0017 0.17 13.5 5.3 1 23 955 977 955 977 0.98

13 14 1.1e-06 0.00011 23.5 3.7 1 23 983 1005 983 1005 0.98

14 14 0.0025 0.25 13.0 6.9 1 23 1011 1033 1011 1034 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.1	6.1e+02	2.3	0.1	2	23	8	29	7	29	0.91
2	14	0.013	1.3	10.8	1.0	1	23	541	564	541	564	0.94
3	14	0.0023	0.23	13.1	2.9	2	23	663	685	662	685	0.92
4	14	3.1	3e+02	3.3	0.6	1	23	693	715	693	715	0.84
5	14	1.8e-05	0.0018	19.7	1.9	2	23	718	739	717	739	0.97
6	14	0.028	2.8	9.7	1.5	1	23	745	767	745	767	0.97
7	14	0.0001	0.01	17.3	5.4	2	23	774	795	773	796	0.95
8	14	0.00029	0.029	16.0	1.6	3	23	834	855	833	855	0.97
9	14	0.056	5.5	8.8	0.0	2	23	871	891	870	891	0.96
10	14	0.00024	0.024	16.2	1.4	1	20	897	916	897	919	0.92
11	14	0.00027	0.027	16.0	0.2	1	23	927	949	927	949	0.99
12	14	0.0017	0.17	13.5	5.3	1	23	955	977	955	977	0.98
13	14	1.1e-06	0.00011	23.5	3.7	1	23	983	1005	983	1005	0.98
14	14	0.0025	0.25	13.0	6.9	1	23	1011	1033	1011	1034	0.95

Sequence Information

Coding Sequence: ATGATGGATTCCGAAAACACAGTCTGTCCAGTGTGCACTTTGTACCTTCGACCTGGCATTACATTAAAGGCCCATTTAACAAGTCACCCCAAGCAAAAGGTTATTGATGCACTTGTAAACTTGACCAACTctagaaatgaaattaaagaagTGGCTGTACCAACTCCACCTTCTCCAGAAGTGGCCCCCAATTCGCAGGCAGGTAATCAGAATTGGAACCAACCTGTCACGGGTTTTCCACCAATGCCTTCACCTGGGAATCATTCCTTCATTTATCAACAATTTATGAGCACAACGAGCCAACCACCTCCTAATGTAGTTAATGTAAACCCTTTAGCACAACAATATATTACTATTCCTGCTGTGTTTAATCCACAAATGATGTGTCAACCATATTTATACCATCAACAACAACAAGTTATTATGTCAGCTGGAAGTGCAGCTTCCTCACTACCACCGCTTCTTCGAAAACCTTCCGTGATTGATTTGTCCACTGAAGAATCTCATATTGAGAATCACGAGGATATAGTTACAGTTGATAATATAAACTCCGTGGAAGTGgaagatgatgatgatgatgatgaagcGGAAGCCATAAAGGAACTTACAAAGGATGATGAAAATGAACCTGATGTTCTTATTCTTGGAGATCAATTACCACTTCCCAATGATGTTAGGGATGAGGAGCCAGTAAGAAATGAGAGCCCACTTATAGTGGGTATTCCTGATCTGAAAGATGATGAAAAACTTGAACAAGCAAAtcaaaagaaagaggaaaaAGAAGAAATGACTGATTTAGTAGAGGATCAAAGAAGGGATGACTATAATATTGAGGACAATCTTGGTTCTCCTGCTTCTAGCACAGGTTCAGATTATTTACGTGTTAGAACAGACCTAAACAAAGCTTGTCAGACTCAACAACTAGCTCAGATCAACAGTATTGAGGACATACATTTGTCTGATGATGGTAATCAAGATGATTCGGCTTACTTTACATCAAGATCTGATGATCATGCTATAACACCTGCGGAAATAATATCTCTCCAAGGTGATTTTGAACataacgatttaaattatacagcaaataatataaatgtTGTACAACCAAACGATCAAGTTATTGATATGGATGGTATGCAGTTAGTGCTCTGTAATGATTTTATGGGAAGTCAACTGATATCTCAGGTAGAAGattttgagtgcataagtaATCGTACTGAAAGAACCGTTTTAATGAACATTGGTGGTATGGATGGAGGATTTACTAATGCATTTGGTGATTCCAATGTTAATGCGGAACATCTTGGTGAAGAAAGTATTTCACATGAGAGTACTAATATGAGTATACGGGCCGATGAACACATGCCACCAAGAGGAGAACTGTCTGGACAGgAGAGTAATGGAGCTGCAAGTGATATAGCTTGGAGTAGAATGCAGTATGAAGGAAGCTCAGCTACCTCAACATCTTATGATCTCCTTGCACGTGAAACGTGGGAGGGTTCAGATTGCTCAGACTCCGAAGTGCCACCACTACAAAGTCGTATTCCGCCCCACATACTTTACAGTCCAGATATAGATGATACACCAACAATTGTGAGTGTCACTGAACCTCCACTGAACTTCAAGTGTCCAATTTGTGGACAAGGTTTCAAATGTCCTAAGGAACGCAGGGTGCATCAGACTGTAGTGCATAGTGACAGAACGGATGATAACAGTAAACATAGCAATAGTGATAAAATTACTAGCACCAACAGCATCATTGGCTCAAAGTTGGCATCCAAGAAACCTGTTAAAAAGTTGATTATTAAGCCGAAGAAAGCGGaaattaaaagtgaaaataattttgataatgtTTTTACTAATAGGCTCAAGTTGGATTCAGCTGCAGTTGAGGGTAACGAAGAAAGAGAGGAAGAAAGGGCTTCAGTTATAGCGGCTGTAGGAGCAGAATGTGATATTGATGATAAAAAGGATGTGAAGTACTGTGTTTGTCATGTTTGTGACTCGGTATTTCCAGATAGCCGATCTCTTAAAAGGCATAAATTACAGCTTCATGGGAAAGGGTATGGAGCAAGGTATAAATGTGATACTTGTGGAGATACTTTATTGAATGAAATCAAGTATAATGAGCATTTGAGGAAACATCCTTTAGAATGCCGTTTgtgtggaaaatatttttacaggcGACAGAACTTGCAATTACATATGAAGCGCCACTTAGGCATCAAACCATATGTATGTGAATTTTGCCAGAAATCATTTTTAACCAAACAAAAATTAGATGAGCATAAAAATATACACACAGGAGAAGCACCTATAAAATGCAATATGTGTGAAGAAACTTTCAAGAGGCACTCAAATTTAGTGCAACATCGAAATCGTCATCACTTGAACATCAAAAGAAAAGTGAAGGATTACATTTGCTTTTGTGGGGAAATCCTACattcaaaaaagaaattagCATGGCACAAGGAGATACATGACtcaaaaccaaaagcatgttcACAATGTAGTGAAAAATTTATACATATGGCCAGTTTAACAAGACATATGCGTCGTGCACATAACGAACGTTTTGTTCCAAAAGAAGAGAGGAGTAATGAGAATGTTGAATGTCCAATTTGTAAAGGTGTTTACTTGAGATCTTCGTTAGAAGTTCATATTCGCAACCATAGTGGTCAAAGACCGTTTACATGTCTGATTTGTAATAAAGATTTTACCACAAAGTGGAATTTAAAGCTTCATAAATGGACACATGCTGCAAGGGCTtcgaaaccttttaaatgtgacCAGTGTAAGGGAGCCTTTATTAGAGAATCTGATTATGTAGCACATATGAACTCTCATAAGAGTGTGAGGCCCTACACATGCAATCATTGTGGTGCACAGTTTATACGAAAGTATAACTGTCAGAGGCATGTTCGGGAACATGAGAAGGCTAAAACATTCTCATGTCAGGTTTGTGGTAAAACTTTTCATAGATCATATTATCTTAAAGATCACATGCGGGTGCATAGCGGCCTAAGGCCGTTTTCTTGTCATATTTGTGGAAAAACATCCACTACAAAGTCTAATCACAACAAACATGTTATGATACACCACGCTAAGGAACCTGTTAGCACTGAAAATTGA
Protein Sequence: MMDSENTVCPVCTLYLRPGITLKAHLTSHPKQKVIDALVNLTNSRNEIKEVAVPTPPSPEVAPNSQAGNQNWNQPVTGFPPMPSPGNHSFIYQQFMSTTSQPPPNVVNVNPLAQQYITIPAVFNPQMMCQPYLYHQQQQVIMSAGSAASSLPPLLRKPSVIDLSTEESHIENHEDIVTVDNINSVEVEDDDDDDEAEAIKELTKDDENEPDVLILGDQLPLPNDVRDEEPVRNESPLIVGIPDLKDDEKLEQANQKKEEKEEMTDLVEDQRRDDYNIEDNLGSPASSTGSDYLRVRTDLNKACQTQQLAQINSIEDIHLSDDGNQDDSAYFTSRSDDHAITPAEIISLQGDFEHNDLNYTANNINVVQPNDQVIDMDGMQLVLCNDFMGSQLISQVEDFECISNRTERTVLMNIGGMDGGFTNAFGDSNVNAEHLGEESISHESTNMSIRADEHMPPRGELSGQESNGAASDIAWSRMQYEGSSATSTSYDLLARETWEGSDCSDSEVPPLQSRIPPHILYSPDIDDTPTIVSVTEPPLNFKCPICGQGFKCPKERRVHQTVVHSDRTDDNSKHSNSDKITSTNSIIGSKLASKKPVKKLIIKPKKAEIKSENNFDNVFTNRLKLDSAAVEGNEEREEERASVIAAVGAECDIDDKKDVKYCVCHVCDSVFPDSRSLKRHKLQLHGKGYGARYKCDTCGDTLLNEIKYNEHLRKHPLECRLCGKYFYRRQNLQLHMKRHLGIKPYVCEFCQKSFLTKQKLDEHKNIHTGEAPIKCNMCEETFKRHSNLVQHRNRHHLNIKRKVKDYICFCGEILHSKKKLAWHKEIHDSKPKACSQCSEKFIHMASLTRHMRRAHNERFVPKEERSNENVECPICKGVYLRSSLEVHIRNHSGQRPFTCLICNKDFTTKWNLKLHKWTHAARASKPFKCDQCKGAFIRESDYVAHMNSHKSVRPYTCNHCGAQFIRKYNCQRHVREHEKAKTFSCQVCGKTFHRSYYLKDHMRVHSGLRPFSCHICGKTSTTKSNHNKHVMIHHAKEPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00399846;
90% Identity: -
80% Identity: -