Basic Information

Insect: Ctenicera cuprea
Gene Symbol: ZIPIC
Assembly: GCA_958336395.1
Location: OY284494.1:21957201-21963686[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7.9 8.8e+02 2.3 0.1 2 23 7 28 6 28 0.91

2 14 0.037 4.1 9.7 1.2 1 23 539 562 539 562 0.89

3 14 0.00042 0.047 15.8 3.0 2 23 661 683 660 683 0.92

4 14 0.33 37 6.7 1.5 1 23 691 713 691 713 0.97

5 14 2.4e-05 0.0027 19.7 1.9 2 23 716 737 715 737 0.97

6 14 0.075 8.4 8.7 1.3 1 23 743 765 743 765 0.97

7 14 3.9e-05 0.0043 19.0 5.4 2 23 772 793 771 794 0.95

8 14 0.00037 0.041 16.0 1.6 3 23 832 853 831 853 0.97

9 14 0.2 23 7.3 0.0 2 23 869 889 868 889 0.96

10 14 0.00069 0.077 15.1 0.9 1 20 895 914 895 917 0.91

11 14 0.00021 0.023 16.8 0.2 1 23 925 947 925 947 0.99

12 14 0.0022 0.25 13.5 5.3 1 23 953 975 953 975 0.98

13 14 1.2e-06 0.00013 23.8 3.5 1 23 981 1003 981 1003 0.98

14 14 0.0032 0.36 13.0 6.9 1 23 1009 1031 1009 1032 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7.9	8.8e+02	2.3	0.1	2	23	7	28	6	28	0.91
2	14	0.037	4.1	9.7	1.2	1	23	539	562	539	562	0.89
3	14	0.00042	0.047	15.8	3.0	2	23	661	683	660	683	0.92
4	14	0.33	37	6.7	1.5	1	23	691	713	691	713	0.97
5	14	2.4e-05	0.0027	19.7	1.9	2	23	716	737	715	737	0.97
6	14	0.075	8.4	8.7	1.3	1	23	743	765	743	765	0.97
7	14	3.9e-05	0.0043	19.0	5.4	2	23	772	793	771	794	0.95
8	14	0.00037	0.041	16.0	1.6	3	23	832	853	831	853	0.97
9	14	0.2	23	7.3	0.0	2	23	869	889	868	889	0.96
10	14	0.00069	0.077	15.1	0.9	1	20	895	914	895	917	0.91
11	14	0.00021	0.023	16.8	0.2	1	23	925	947	925	947	0.99
12	14	0.0022	0.25	13.5	5.3	1	23	953	975	953	975	0.98
13	14	1.2e-06	0.00013	23.8	3.5	1	23	981	1003	981	1003	0.98
14	14	0.0032	0.36	13.0	6.9	1	23	1009	1031	1009	1032	0.95

Sequence Information

Coding Sequence: ATGGATACCGAAAACACAGTTTGCCCTGTGTGCACTTTGTACCTTCGGCCTGGGATTACGTTAAAGGCTCATTTGACAAGTCACCCCAAGCAGAGGGTAATTGATGCACTTGTAAACTTAACTAACTCAAGAAATGAAATCAAAGAGGTGGCTGTACCAAGCCCATCCCCACCCGAAGTGGCCTCCAGTTCACAGACAGGTAATCAGAATTGGAGCCAACCTGCGTCGGGTTTTCCACCAATGTCGACACCTGGGAATCATTCCTTTATATATCAACAGTTTATGAGCACAACGAGTCAACCACCAAATGTAGTTAATGTAAATCCATTAGCACAGCAATACATTACGATCCCTGCTGTTTTTAATCCACAAATGATGTGTCAACCATACTTGTACCATCAGCAGCAGCAAGTTATTATGTCAGGTGGAACTGGTGCTTCCTCATTACCAACTCTTCTTCGTAAACCTTCGCTGATTGATTTGTCTAATGATGTTGAACCGCAAACTGAGAACCAGGAGGAGTTAGTATCAAGTGATGACAATGTAAATTGTGTGGAGTTAGAGGATGATGATGATGCAAATGTAACAAAGGAAACTTCTAAAGATGATGCAAATGAAGCTGGTGTAGTTATAGGTGAAGAACAAATACCACCCTTAAACGATGTTGGAGAAGAAGAACTGGTAGGACATGGCAGTCCACTTACATTAAATATAGaggaaaatcttaaaaatgatttaaaacttGTAGCGAAAAATcataagaaagaagaaaaagaagagcaGTTTGATGAGATGGAGGATCAAAGACAAGAAGAATTTCATATAGAGGAGAACCTTGGGTCTCCTGCTTCTAGCACAGGCTCAGATTACTTGCGTGTTAGAACGGACCTAAACAAAGCTTGTCAGACTCAACAAGTAGCTCAGATCAACAACATTGAGGACATCCACTTGTCCGATGAAGATAATCCAGATGAGTCGGCTTATTTTACTTCAAGATTTCAAGATCAAGCTCTAACATCTACCGAAATTATAGCTCTCCAAGGTAGTTTTGAACAAAATCACTTAAATTACACAACTAACAACATAAATGTTGTACAACCTCATGATCAAGTTATTGATATGGACGGCATGCAATTAGTGCTCTGTAATGATTTCATGGGGAGCCAGTTGATATCTCAGGTGGAAGACTTCGAGTGCATAAGTAATCGTACTGAAAGAACTGTTTTAATGAACATTGGAGGTATGGATGGAGGATTTGCTAACACAGTCGGTGATTCTAACGTTAATGTCGAACAACTTGGCGAAGAAAGTATTTCACATGAAAGTACTAATATGAGTATACGAGCTGATGAACACATGCCACCTAGAGGGGAATTGTCTGGACAGGAGAGTAATGGAGCTGCAAGTGATATAGCATGGAGTCGAATGCAGTATGAAGGTAGCTCAGCCACATCAACATCTTACGATCTACTAGCTCGTGAAACATGGGAAGGCTCGGATTGCTCAGATTCCGAAGTGCCACCACTACAAAGTCGAATTCCGCCCCATATACATTACAGTCTCGATATAGATGACACACCGACAATTGTGAGTGTCACAGAACCCCCACTGAACTTCAAATGTCCGATTTGTGGACAAGGCTTCAAATGTCCTAAGGAACGCAGGGTGCATCAAACTGAAGTGCATAGTGACAAAACAGACGATAATAGTAAAAGTAGCAATAGTGATAAAATTACTAGCAGTAACACCATTATTGGCTCAAAACTGGGACCCAAGAAACCTGTAAAAAAGTTGATTATTAAGCCGAAAAAACCggaaattaaaagtgaaaataattttgataatgttttcaCGAATAGGCTCAAGTTGGATACGATTGCGGTAGAAAATAATGAAGAGATAGAGGAGGAAAGGGCTTCGGTTATAGCTGCTGTAGGAACTGAGTGTGATATTGATGATAAGAAGGATGTTAAATATTGCGTTTGTCATGTCTGTGACACAGTGTTTCCAGATAGCCGATCATTAAAGAGGCACAAATTGCAGCTGCATGGTAAAGGCTTTGGGACACGCCACAAATGCGATACATGTGGGGAAACGTTGTTGAATGAGGTCAAGTACAACGAACATTTGAGAAAACATCCTTTGGAATGCCGGTTgtgtggaaaatatttttacagGCGGCAGAACTTGCAACTGCATATGAAACGCCACTTAGGTATCAAACCATATGCATGTGAATTTTGCCAGAAGTCATTTTtaaccaaacaaaaattagatgaacataaaaatatacacaCAGGAGAAGCACCTATAAAATGCAATATGTGTGATGAAACTTTCAAACGGCACTCAAATTTAGTGCAACATCGAAATCGCCAtcatttgaatatcaaaaagaaAGTGAAAGATTACATTTGCTTTTGTGGAGAAATCCTCCACTCCAAAAAGAAGCTAGCATGGCACAAGGAGATTCACGACTCAAAACCTAAAGCTTGTTCCCAATGTAGCGAAAAGTTTATACATATGGCCAGTTTAACGAGACATATGCGTCGAGCACACAATGAACGTTTTGTTCCAAAAGAAGAGAGGAGTACTGAAAATGTCGAATGTCCAATTTGCAAGGGTATTTATTTGAGATCTTCACTAGAAGTTCATATCCGCAACCATAGCGGCCAAAGACCATTTGCTTGTCTGATTTGTAATAAAGATTTTACCACCAAGTGGAACTTAAAGCTTCATAAATGGACACACGCCGCAAGGGCTTCAAAGCCTTTCAAGTGTGACCAGTGTAAGGGAGCCTTTATTAGAGAATCGGATTACATAGCACACATGAATTCCCATAAAAGTGTTAGGCCCTACACTTGTAATCATTGTGGTGCTCAGTTTATACGGAAGTATAACTGCCAAAGGCATGTTAGGGAACATGAGAAGGCCAAGACATTTTCGTGTCAGGTTTGTGGTAAAAGTTTTCATAGATCGTACTATCTTAAAGATCACATGCGGGTGCATAGCGGCCTAAGGCCGTTTTCTTGTCATATTTGTGGAAAAACGTCCACTACAAAGTCTAATCACAATAAACATGTTATGATACACCATGCTAAGGAGCCTGTTAGCACTGAAAATTGA
Protein Sequence: MDTENTVCPVCTLYLRPGITLKAHLTSHPKQRVIDALVNLTNSRNEIKEVAVPSPSPPEVASSSQTGNQNWSQPASGFPPMSTPGNHSFIYQQFMSTTSQPPNVVNVNPLAQQYITIPAVFNPQMMCQPYLYHQQQQVIMSGGTGASSLPTLLRKPSLIDLSNDVEPQTENQEELVSSDDNVNCVELEDDDDANVTKETSKDDANEAGVVIGEEQIPPLNDVGEEELVGHGSPLTLNIEENLKNDLKLVAKNHKKEEKEEQFDEMEDQRQEEFHIEENLGSPASSTGSDYLRVRTDLNKACQTQQVAQINNIEDIHLSDEDNPDESAYFTSRFQDQALTSTEIIALQGSFEQNHLNYTTNNINVVQPHDQVIDMDGMQLVLCNDFMGSQLISQVEDFECISNRTERTVLMNIGGMDGGFANTVGDSNVNVEQLGEESISHESTNMSIRADEHMPPRGELSGQESNGAASDIAWSRMQYEGSSATSTSYDLLARETWEGSDCSDSEVPPLQSRIPPHIHYSLDIDDTPTIVSVTEPPLNFKCPICGQGFKCPKERRVHQTEVHSDKTDDNSKSSNSDKITSSNTIIGSKLGPKKPVKKLIIKPKKPEIKSENNFDNVFTNRLKLDTIAVENNEEIEEERASVIAAVGTECDIDDKKDVKYCVCHVCDTVFPDSRSLKRHKLQLHGKGFGTRHKCDTCGETLLNEVKYNEHLRKHPLECRLCGKYFYRRQNLQLHMKRHLGIKPYACEFCQKSFLTKQKLDEHKNIHTGEAPIKCNMCDETFKRHSNLVQHRNRHHLNIKKKVKDYICFCGEILHSKKKLAWHKEIHDSKPKACSQCSEKFIHMASLTRHMRRAHNERFVPKEERSTENVECPICKGIYLRSSLEVHIRNHSGQRPFACLICNKDFTTKWNLKLHKWTHAARASKPFKCDQCKGAFIRESDYIAHMNSHKSVRPYTCNHCGAQFIRKYNCQRHVREHEKAKTFSCQVCGKSFHRSYYLKDHMRVHSGLRPFSCHICGKTSTTKSNHNKHVMIHHAKEPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00789654;
90% Identity: -
80% Identity: -