Hnig028897.1
Basic Information
- Insect
- Hemicrepidius niger
- Gene Symbol
- dmd-4
- Assembly
- GCA_963082805.1
- Location
- OY720166.1:536630-537811[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-25 7.3e-21 74.9 11.5 1 47 9 55 9 55 0.98 2 2 0.02 2.7e+02 2.7 0.7 29 35 238 244 236 250 0.86
Sequence Information
- Coding Sequence
- atgttggCCAACAGTCGTTCATCGAGGGTACCGAAATGTGCTCGATGCAGGAATCACGGGATGATTTCCACCTTAAGAGGACACAAGAAACaatgtgtttataaaaattgtaattgtgCCAAATGTGGGCTTATTAAAGAAAGACAACGGATTATGGCCGCCCAGGTGGCCCTGAAAAGACAGCAGGCTGCAGAAGACGCCATTGCTCTTCATCTTGCATCTGCTGAAAGTGGCACCACTTACGATTACCTTCCTCCAGGAAGAATTTTCGGGATGCAAGTGACATCTCCAGAAACAGACTCTGAAACTGATCGTGAAAAACTTTCGACACCTCCTGAACAAACTTCTGATGAAGTCGTTGTCAGTCCAGCCTCCGTTGATATGCTCAGTAAATTATTTCCgaataaaaaaagggcggttTTGGAATTAGTCCTAAGACGATGTAACCATGATCTGCTGAAAGCTATTGAGCATTTTAATTTAAGCCACAGCAAACAAGATTTAACATTGGAAGAATCCAAAAAGGACGAGTACGGTTCTGCGTTTAAGCCGGTGCATAATAATAAGGGGGTTAAAAGTTTTTCTAATACCCACCAAAGTGGGGTTCCTTTGCTAACAGGGAGTAAAGTGTTTATGCATAGCTTGTACCCCTTTTTACCGTTTTTTAATACTCAACCTGTTTTGCCCAGCCCTGTATATGTACCTGGCTTTTGTGAATGTGATCAATGCAAACATGGGTTGTATACGAGAATTGAACCCCGTTTATAA
- Protein Sequence
- MLANSRSSRVPKCARCRNHGMISTLRGHKKQCVYKNCNCAKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTTYDYLPPGRIFGMQVTSPETDSETDREKLSTPPEQTSDEVVVSPASVDMLSKLFPNKKRAVLELVLRRCNHDLLKAIEHFNLSHSKQDLTLEESKKDEYGSAFKPVHNNKGVKSFSNTHQSGVPLLTGSKVFMHSLYPFLPFFNTQPVLPSPVYVPGFCECDQCKHGLYTRIEPRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00399178; iTF_00927717; iTF_00268295; iTF_00269832; iTF_01291600; iTF_00271185; iTF_01293725; iTF_00950885; iTF_00422445; iTF_00641485; iTF_00978011; iTF_00949902; iTF_01295214; iTF_01517263; iTF_00003772; iTF_00853981; iTF_00153216;
- 90% Identity
- iTF_00399178; iTF_00978011;
- 80% Identity
- -