Hnig031701.1
Basic Information
- Insect
- Hemicrepidius niger
- Gene Symbol
- tfip11
- Assembly
- GCA_963082805.1
- Location
- OY720167.1:9602121-9606416[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-97 4.1e-93 313.1 12.5 1 275 395 666 395 666 0.97 2 2 0.15 3.1e+03 -1.4 0.0 157 190 678 710 671 721 0.67
Sequence Information
- Coding Sequence
- ATGTCTGACACAGAATACgagaaatttgaaataactGATTATGATATTGAAAATGAATTTAATCCTAACAGACCTCGAAGAGGTTTCAGCAAACACCAACAAATTTATGGCATTTGGGCTGACGACAGTGACAATGAAGGAAATGAAAGACCGTCTTTTAAATCCACAAAAGTTCCAAAAAATTACTCTGCACCGATAGGATTTGTGGCAGGTGGAGTTCAACAAGCAGGAAAGAAAGATAAACGTGAAATAAAGGAAAATGATGAATCAGAAACACCCTCggcttcatttaaaattgaaaattcttcCAGTGAATCGGAAAGTGAAATTCAAACCCCCAGAATTGGTTTCGAAACACAAAGGGCAAAAACTCAATCAACCGTAACAGAAATCACTGGAGATATTGCAGGCTTGAGAAAAGCAAATAGTCAAGTGAATTCAAGTTTAATGAGAAAAGGTGTTGGAAACTGGGAGAAGCATACAAAAGGGATTGGAGCAAAACTATTGCTTCAAATGGGTTATCAACCTGGTAAGGGTTTAGGAAAAGATCTACAAGGTATTTCTGCACCAGTTGAAGCTCACCTCAGGAAAGGAAGAGGTGCTATAGGTGCTTACGGACCAGAAAAGGCAGCTAATATACCTTTACTCAAGGAAAAGATAATTGATGTTGATGAAATTGATAAAGAATCAGAGTCAAAATGGAAAAAAAGTGATATGGCAAAGAAAAAAACAAGATACTACTACAGAACGGTTGATGATGTTATTGAAAAAGGTAAACGTCCTGGATCTTTTGTAGGCTGTGGACCAACAAGTGAACTCAGTAAAGTAAAAGTTATTGACATGACGGGTCCTCAACAAAGAATATTGAGTGGGTATCATGCTCTCAGTGGCCTGAAAGCACCTCCTGGAGTAGAACACTTTGAAGATGTGGTCcacaaaaaatgttcaaattttGCATTGCCAGAAATACAACATAATTTAGATTTATTGGTTAGCATGTGTGAACAgGATATCATTAACATTGATCGTAATACAAGGTACAACCAAGACAAAGCAGTTGCTTTAATCCATGaagaaaaatctttaaataaaattttagaagatGAGGATGCACATATAGATAACTTAAAAGAAGTTCTTGAAAATGTTGATAAGTTAACAGATCCAACTCAAGGATTATCTTTAGGACAATTTGCTCAAATGTTTAAAGATTTACAGcaaaaacaTTCAGAAGAATATTATATGTACCACCTGGGTGAGCTGGCTCCTGGTTTAGTAGGACCTTTAATAACATCAGCACTTGTTAGTTGGTCACCTTTGGTAGCTCCCAAGCAGTACACCGATGTGTTTATGCAATGGAAGGGAATCTTAGAGAAACCTCAACAACGTGGGACTCTAGAAGGTAATTGTATGGGAATTCAGCCGTATGATAGTCTCTTATGGCACACTTGGGTGCCTGTATTGAGAACCTGTGTTAGTGCTTGGAATGTTCGAGATTGTGATCCATTGATAGCTCTCTTAGAGATTTGGAAACCTCTACTACCACAATGGATTTTGGATAATGTCTTAGATCAGTTAATTATGCCTCGATTAACTACTGAAGTAAACAATTGGAATCCTCTGACAGACACTGTACCGATTCACTATTGGATTCATCCATGGATTCCAATATTAGATACACGTTTACATACTGCAATCTTTCCTGTTATACAAGAAAAACTTGGAGCTGCTCTTAACAACTGGCATCCTTCTGATCGATCagcaaaattaatgttaaagcCTTGGAAGGAGGCATTACCTAGTGGTTCATTCGTTGCATTTCTTCTAGCTCATATTGTACCAAAATTGCAATTATGTATGCAATCTCTTGTTATTAATCCACATCAGCAACACTTAGATGCCTGGAACTGGGTCATGGATTGGAATGATATGCTATCAGTTGGAAATTTAACTCTAATATTGGATAAGTATTTCTTTCCTCGATGGTTGCAAACTCTTGCAATGTGGCTCAATCATAATCCTGACTATAATCAAGTAACAGAATGGTACTCTGGATGGAAAAGAATGCTGTCAGATGAATTACTTTTACAACCAACAATTAAAGACAACTTTCACAAAGCCCTGGAAATGATGAACCGTGCAGTTAGCTCAGGACAACAACCTGGTGCTAAGGAATTTGTCTCATATCTTACAAATATGGAGACCAACGCACCACCCCCTCAACCACCCCCAAGAGTAGAGGCTATAGCAGAAGCTGTCAGAACGGCCTCTCAAATACCACAAGGGTTCAAAGATCTTGTTGCCAAGCGCTGTGAAGAGAAGGGCATTTTATTTGTACCGGTTCTCAATAAATTCTATGAAGCTAAACAAGTTTATAGATTAGGTTCTAATGGTGTGCAAGTTTATTTTGATAGAAGTGTTATATTTTACTCACAAAATAATTCTTCGTGGTTACCTATATCTTTAAATAGATTATTAGATATGGTGTAG
- Protein Sequence
- MSDTEYEKFEITDYDIENEFNPNRPRRGFSKHQQIYGIWADDSDNEGNERPSFKSTKVPKNYSAPIGFVAGGVQQAGKKDKREIKENDESETPSASFKIENSSSESESEIQTPRIGFETQRAKTQSTVTEITGDIAGLRKANSQVNSSLMRKGVGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKAANIPLLKEKIIDVDEIDKESESKWKKSDMAKKKTRYYYRTVDDVIEKGKRPGSFVGCGPTSELSKVKVIDMTGPQQRILSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDLLVSMCEQDIINIDRNTRYNQDKAVALIHEEKSLNKILEDEDAHIDNLKEVLENVDKLTDPTQGLSLGQFAQMFKDLQQKHSEEYYMYHLGELAPGLVGPLITSALVSWSPLVAPKQYTDVFMQWKGILEKPQQRGTLEGNCMGIQPYDSLLWHTWVPVLRTCVSAWNVRDCDPLIALLEIWKPLLPQWILDNVLDQLIMPRLTTEVNNWNPLTDTVPIHYWIHPWIPILDTRLHTAIFPVIQEKLGAALNNWHPSDRSAKLMLKPWKEALPSGSFVAFLLAHIVPKLQLCMQSLVINPHQQHLDAWNWVMDWNDMLSVGNLTLILDKYFFPRWLQTLAMWLNHNPDYNQVTEWYSGWKRMLSDELLLQPTIKDNFHKALEMMNRAVSSGQQPGAKEFVSYLTNMETNAPPPQPPPRVEAIAEAVRTASQIPQGFKDLVAKRCEEKGILFVPVLNKFYEAKQVYRLGSNGVQVYFDRSVIFYSQNNSSWLPISLNRLLDMV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00853958;
- 90% Identity
- -
- 80% Identity
- -