Hnig013839.1
Basic Information
- Insect
- Hemicrepidius niger
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963082805.1
- Location
- OY720161.1:38737796-38742317[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5 1.1e+04 -2.2 0.0 32 43 199 210 197 212 0.85 2 2 4.4e-14 7.4e-11 43.1 0.1 3 44 594 635 592 637 0.95
Sequence Information
- Coding Sequence
- ATGATTGCTTTTGGACCGAAAAAGGACGGAAGTCCTAACGTAAAGTACTTTGAATCCGCTGAAACATTATCCTCGTTTGAAGTCGTAAGACAGTGGCtacaaaaaaatgctaaaaAGTATGTACAGTCGGATCCTCCAACAAACAAAGGTTTATCATCGCTTGTGgtacaattattacaatttcAAGAAGACCATTTGGGTAAAAATGCTCAAAAACCACCGATGACAAGAATTCCTataaaatattttatggattTTAAACCAAGTGGTGCTTTGTGCCACATTTTAGCCACCGCTTATCGTTTTAAACATGATCAGGGTTGGAGAAAATTCGACATGCAAATTGGAAAGaGTCCAGCAAGACTCGATCGTTTAATCGAAATGTACCAAGCTATAGAAAAGGTTTTAATCCAAAACAAATTCTACATCCTCCcggtaatatttataaaaccaGAGATTGAAAAAAACCTTGCAGCAAAGTTGAAAGAAATCGTGAGGAAAAGAAATGGACAAGCAGTGGACAGCGAGGAGATGGCAACCCATATTCTCTACCCCCATTGTGACCCCCTGGAAGAAGAATACGCCCGACCAGGTCTGAGAAGAGACAAAATGATCATCATGCATTGGTATTACTTTCCTGATTCTTACGATACTTGGGTAGGGATGGAAGGAGCTTTAGAGGGACTCAGTGCCGATTCTCCTTCACCCCATTCCGGTCCGTGGCGTGTCTCCTCTACTTGGCTACTAGATTCAGATCAATACAACGAGTGGATGACCGAAGAGGATTATGAAGTGGATGAAGCTGGACAGAAGAAGATTCATCGTATGAGGATGTCCGTGGAAGATCTTATGAATCCATCAGGGGATCTCGACAGAAACAAaaaaaaagtgaAAAGGAAACGTTCTCCATCACCAACCCAAAAAAGTGGCAAACGTAAAAGCGGAAGAAGTCCTGCTGTAGGTAAAAAACAACGCCCCGATGAAATTGAACCAGAAGACCTAACAAAAGACATGGAGGAACCAGCCCCAGAACCGAGCATTGTTGAAGTCAGTCCCACTTCTGCAGGCCAAATGGGTAAAAAAGACCATGAACTGCAACCCTTAAAAGGGGGATCAGTTACTGATTTAGATGAAGGAGAAGATCGAGGTGAAGATTCGCAAACAGGAAAAAACAGTGACAGCAATACACAAGATAAAGATGACGGACAAGAAGATAATGTAACAGAACAAACCCATCACATTATTATTCCATCGTATTCAGCTTGGTTTGATTATAATTCCATTCATGACTTGGAAAAACGTGCCCTTCCGGAATTTTTCAATGGAAGGAACAAATCTAAGACCCCGGAAATATACATGGCTTACCGGAATTTTATGATTGATACGTACCGATTAAACCCGACGGAATACATTACAAGCACGGCTTGTCGTAGGAATCTAGCGGGTGATGTTTGTGCTATAATGCGAGTCCATGCGTTTTTAGAACAATGGGGGTTGATTAATTACCAAGTTGATACGGATTCGCGTCCTACACCCATGGGACCACCTCCAACTTCACATTTCCATATCTTATCCGATACCCCATCAGGTTTACAGCCGGTTAATCCCCCGAAGACACCCCAACCAAGCGCTGCTAAGACTTTACTGGATTTAGATCGAGCCCAGGAAGGGAAAAAAGTGGACAGTATCGATCACATGTCGAactttggtttaaaattggaTCAATACGCGAAGAAACCTGCGGTTTTAAGAAACAAAACTGCGGCGTCGCTTTCACGCGATTGGACGGAACAAGAAACCCTTTTATTATTAGAAGGTCTTGAAATGTTCAAAGATGATTGGAATAAAGTCTGCGAACACGTTGGATCGCGTACACAAGACGAATGTATTTTACATTTCCTCCGGTTACCGATCGAGGATCCGTATTTGGAAGATCCGGAAGCCGGAGGTGCATTGGGCCCGCTTGCTTATCAACCAATTCCGTTCAGCAAAGCAGGGAATCCAATCATGTCCACTGTAGCGTTCTTAGCGTCAATTGTTGATCCGAGGGTAGCAGCCGCTGCGGCAAAATCCGCCATGAATGAGTTTGCAAGCATTAAAGATGAAGTCCCGGCCGCTTTAATGGATGCCCATATGAAAAACGTGGAAGCTTCATCAACAGACGGTAAATTCGATCCATCAGCCGGGTTGGCTTTAAGCGGAATTGCGGGAACCGTTCCAGAAAAAGAAGAggaagataaaataaaaaaagaggcCGCCGATGTCAAAGAAGATGAAAAACCAGCGGAAACGGAACAAAAGAAAAACGGGGTTGAAGAAGAAAAACCTGAGGATACAACGACAATTAAAGTTGAAGCAGTGGAAGGGGAAAAAGATGATAAAATGGATACGTCTGAGAGTAAACCGGAAAAATTAATACGGGACAGTGAAATGCAAAGCGCAGCCGCTGCTGCTTTAGCAGCGGCAGCAGTTAAAGCTAAACATTTAGCCGCTGtagaagaaagaaaaattaaatctttagtCGCGTTATTAGTGGAAactcaaatgaaaaaattagaaatcaaATTAAGACATTTCGAGGAATTAGAAACCACAATGGAACGTGAACGTGAAGGTTTAGAATATCAAAGGCAACAACTGATAACAGAACGTCAACAATTCCATTTGGAACAACTTAAAGCCGCGGAGTTCCGTGCAAGACAACAAGCGCATCAAAGAATGCAAGCGGAGCAAGGCCAATGGGCTGCGCAACAAAACGCCGTACCACATTCAACCCCTGCTGGGGACACCGGTCCTAGTACAACACCCACCCCGCCTTCACCTCAAGCTGCTGCGGTTGCATCACCAGCTCCACCTCATCATCACATATGA
- Protein Sequence
- MIAFGPKKDGSPNVKYFESAETLSSFEVVRQWLQKNAKKYVQSDPPTNKGLSSLVVQLLQFQEDHLGKNAQKPPMTRIPIKYFMDFKPSGALCHILATAYRFKHDQGWRKFDMQIGKSPARLDRLIEMYQAIEKVLIQNKFYILPVIFIKPEIEKNLAAKLKEIVRKRNGQAVDSEEMATHILYPHCDPLEEEYARPGLRRDKMIIMHWYYFPDSYDTWVGMEGALEGLSADSPSPHSGPWRVSSTWLLDSDQYNEWMTEEDYEVDEAGQKKIHRMRMSVEDLMNPSGDLDRNKKKVKRKRSPSPTQKSGKRKSGRSPAVGKKQRPDEIEPEDLTKDMEEPAPEPSIVEVSPTSAGQMGKKDHELQPLKGGSVTDLDEGEDRGEDSQTGKNSDSNTQDKDDGQEDNVTEQTHHIIIPSYSAWFDYNSIHDLEKRALPEFFNGRNKSKTPEIYMAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTDSRPTPMGPPPTSHFHILSDTPSGLQPVNPPKTPQPSAAKTLLDLDRAQEGKKVDSIDHMSNFGLKLDQYAKKPAVLRNKTAASLSRDWTEQETLLLLEGLEMFKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKDEVPAALMDAHMKNVEASSTDGKFDPSAGLALSGIAGTVPEKEEEDKIKKEAADVKEDEKPAETEQKKNGVEEEKPEDTTTIKVEAVEGEKDDKMDTSESKPEKLIRDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRMQAEQGQWAAQQNAVPHSTPAGDTGPSTTPTPPSPQAAAVASPAPPHHHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00399040;
- 90% Identity
- iTF_00153097;
- 80% Identity
- -