Alei091990.1
Basic Information
- Insect
- Aquatica leii
- Gene Symbol
- SMARCC2
- Assembly
- GCA_035610365.1
- Location
- CM069437.1:39934915-39938465[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-14 2.2e-10 43.1 0.1 3 44 593 634 591 636 0.95
Sequence Information
- Coding Sequence
- ATGATCGCTTTTGGGCCCAAAAAAGATGGAAGTCCCAATATCAAGTATTTCGAATCACCAGAAACTTTAGCGTCGTTGGAAGTAATACGACAATGGTTacaaaaatctgcaaaaaaGtACATTCAATCGGATCCACCGACAAATAAAACGCTGTCGACTCTCGTAATACAACTGTTGCAATTCCAGGAAGATAATTTAGGGAAAAATGCTCAAAAACCACCAATTACTAGAATACCCATAAAGTATTTTATGGATTTTAAACCAAGTGGTGCCCTTTGCCACATCTTAGCGACTGCATATCGATTTAAAAGCGAGCAAGGTTGGagaaaatttgattttcaaattgGAAAGAGTCCAGCTAGATTGGATCGCTTCGTTGAAATGTTCCAGGCAATTGAAAAGGTTTTGGTCCAAAATAAATTCTACACTCTTCCTGTCATTTATGTGAAACCGGAAATCGACAAAAATTTAGGTGGCAAACTTAAGGAGATTGTGAGGAAACGTAATGGACAGGCTGTGGACAACGAAGAGATGGCTACACATATTTTGTACCCGCACTGCGATCCTCTGGAAGAAGAATACGCTCGACCAGGTCTGAGAAGGGAGAAAATGATCATGATGCATTGGTACTATTTTCCTGATTCTTACGATACTTGGGTAGGCATGGAAGGTGCGTTGGAAGGGCTCAATACCGACATTCCGTCTCCCCATTCTGGTCCGTGGAGAGTTTCGTCGACGTGGCTTCTAGATTCCGACCAATACAACGAGTGGATGACCGAGGAGGACTACGAAGTGGACGAGTCTGGGCAAAAGAAGATTCATCGTATGAGAATGTCCGTTGAAGATCTTATGAATCCCTCGGCTGACCTTGAcagaaataaaaagaaacaaaaaaggaagCGTTCTCCTTCACCGCCCCTAAAAGGTGGTAAACGAAAAAGTGGACGAAGTCCAGCGGTTGGAAAAAAGCGACCCGACGAAATCGAACCTGAAGATTTAACAAAAGATATGGAAGAACCGATCCCCGAACCAAACATCGTTGAAGTTAGTCCATCGTCTGCCAGTCAACTCGGCAAGAAAGATCACGAACTGCAACCGTTAAAAGGAGGTTCTGTGACGGATTTAGACGAGACCGAAGATCGCGGAGAAGATTCTCAAACTGGTAAAAACAGCGATAGTAATACACAAGATAAAGAGGACAGTCAAGAAGATAACGTTACCGAACAAACGCACCACATTATCATTCCATCATATTCGGCGTGGTTCGATTATAATTCAATTCACGATTTGGAGAAGCGTGCGTTACCGGAGTTTTTCAATGGTcgtaacaaatcaaaaacgcCCGAAATTTATATGGCTTATAGAAACTTCATGATCGATACTTATCGGTTGAATCCAACTGAATACATTACTAGCACCGCGTGTCGTCGTAATTTAGCCGGCGATGTCTGCGCTATTATGAGGGTGCACGCATTTCTGGAACAATGGGGATTGGTTAATTATCAGGTGGACACAGATTCTCGACCATCACCTATGGGACCTCCACCTACTTCCCATTTTCACATATTATCGGACACACCATCGGGATTACAACCAGTTAATCCACCTAAAACGTCCCAACCTAGTGCCGCAAAAACTTTATTAGATCTCGATCGTTCCCAAGACTTCAAGAAGATGGATAGCATGGATCACATGGTCAATTTTGGATTAAAATTAGATCAGTATGCAAAAAAACCTGCAGTTTTAAGAAATAAGACGGCAGCTTCGCTTTCTCGCGATTGGACAGAACAAGAAACGTTGCTGCTTTTAGAAGGTCTCGAAATGTTCAAAGACGATTGGAATAAAGTTTGCGAGCATGTAGGATCACGAACGCAGGATGAgtgtattttacattttctcCGCTTACCAATCGAAGACCCATACTTAGAGGATCCTGAAGCAGGTGGCGCTTTGGGCCCGTTAGCGTATCAACCAATACCGTTTAGTAAATCAGGAAATCCTATTATGTCGACCGTGGCGTTTCTAGCGTCGATTGTAGATCCACGCGTGGCAGCTGCAGCCGCAAAATCGGCTATGATCGAATTTGCAAACATAAAGGATGAAGTACCCGCTGCGCTAATGGACGCgcacttaaaaaatgttgaggCGTCATCCACAGAAGGAAAATTCGATCCTTCGGCAGGATTAGCATTGAGCGGCATAGCAGGCACTGTGCCTGAAAAAGAAGAGGAGGATAAAGTGAAGAAAGAGAAcgataaagaagaagaaaaaagtagTGACGGCGAACAAAAGAAAAACGGCGTCGAACCGAACGAAGAAAAAATAGAGGAGAAACCAATTAAGGATGAAATAACCGAAAATGAGAAAGATGAGAAAATGGACACTAGCGAAATTAAAAGCGAGAAAGTTTTGCGCGATAGTGAAATGCAAAGTGCGGCTGCTGCCGCTTTGGCGGCCGCTGCAGTTAAAGCTAAACATTTAGCAGCCGTCGAAGAgcgaaaaataaaatcgttagtCGCGTTGCTGGTTGAAACACAAATGAAGAAGTTGGAAATTAAGTTGAGACACTTTGAAGAATTAGAGACTACGATGGAGCGTGAACGAGAAGGATTAGAGTATCAAAGGCAGCAGTTGATAACGGAAAGGCAACAATTTCATTTGGAACAATTAAAAGCCGCGGAATTCCGTGCAAGGCAACAAGCGCATCAACGAATGCAAGCTGAACAAGGTCAATGGGCCGCGCAACAAAATCCAGCGACACATTCTGCACCTCCCAGCGACACAGGAGCCAGCACTACACCAACACCACCTTCTCCACAAGCTGCAGCGGTCGCTTCACCAGCGCCGCCGCATCATCATATGTAA
- Protein Sequence
- MIAFGPKKDGSPNIKYFESPETLASLEVIRQWLQKSAKKYIQSDPPTNKTLSTLVIQLLQFQEDNLGKNAQKPPITRIPIKYFMDFKPSGALCHILATAYRFKSEQGWRKFDFQIGKSPARLDRFVEMFQAIEKVLVQNKFYTLPVIYVKPEIDKNLGGKLKEIVRKRNGQAVDNEEMATHILYPHCDPLEEEYARPGLRREKMIMMHWYYFPDSYDTWVGMEGALEGLNTDIPSPHSGPWRVSSTWLLDSDQYNEWMTEEDYEVDESGQKKIHRMRMSVEDLMNPSADLDRNKKKQKRKRSPSPPLKGGKRKSGRSPAVGKKRPDEIEPEDLTKDMEEPIPEPNIVEVSPSSASQLGKKDHELQPLKGGSVTDLDETEDRGEDSQTGKNSDSNTQDKEDSQEDNVTEQTHHIIIPSYSAWFDYNSIHDLEKRALPEFFNGRNKSKTPEIYMAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLVNYQVDTDSRPSPMGPPPTSHFHILSDTPSGLQPVNPPKTSQPSAAKTLLDLDRSQDFKKMDSMDHMVNFGLKLDQYAKKPAVLRNKTAASLSRDWTEQETLLLLEGLEMFKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKSGNPIMSTVAFLASIVDPRVAAAAAKSAMIEFANIKDEVPAALMDAHLKNVEASSTEGKFDPSAGLALSGIAGTVPEKEEEDKVKKENDKEEEKSSDGEQKKNGVEPNEEKIEEKPIKDEITENEKDEKMDTSEIKSEKVLRDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRMQAEQGQWAAQQNPATHSAPPSDTGASTTPTPPSPQAAAVASPAPPHHHM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00399040;
- 90% Identity
- iTF_00853891; iTF_00003692; iTF_00002517; iTF_01517156; iTF_00838469; iTF_00399040; iTF_00788814; iTF_01284446;
- 80% Identity
- -