Hfuc008722.1
Basic Information
- Insect
- Hemaris fuciformis
- Gene Symbol
- -
- Assembly
- GCA_907164795.1
- Location
- OU015445.1:15116858-15126316[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-10 4.2e-08 33.3 0.0 4 39 175 211 172 215 0.89 2 4 6.2e-13 2.3e-10 40.6 0.2 1 39 226 264 226 268 0.95 3 4 1.5e-13 5.5e-11 42.5 0.1 2 45 282 326 281 326 0.96 4 4 3.8e-18 1.4e-15 57.3 0.1 1 42 333 375 333 378 0.95
Sequence Information
- Coding Sequence
- ATGCCGGGCGACGGCTTGTCCCGCGTTAAAAACGAGCCACTGTCGGAGGAAGAAGACAGCAACTCATTTGTCCACAGTTATCTGTCTAATCAGGTGTCTTCAGAAGAGTCGCATGTGGTTACGTTTGGGACGGAATATCTGAGGAGTGAAAATGCCCCGTCGCACCTCATGCATCCTTTACATGGCTCCGGGCTGGAGGAGCTGGTCCCGCTGGCGCCGGCGGGTCCTGCGGCCACCCCCGTGTGCGTGAAGCAGGAGCCCAGCGAGCCCGCGCCCGCACTCACCCTCGAGACGCTCGAGCCCGCGACACACTCGGCTGAAGGTGCAGCTCTCATAGACAGACATTTAGCGTTACTGAACGCTAGCGATGTGCCCGACGAGTTTATGCCACTAATATCAGTGAAAGATGAACCACTCTCTGAAGGAGAACAGCAACAGTTAAGCGGTGAGGACACGAGTGACTCGTGCGGGACTCAGCCGGAGACCTCGACGCGCGGGAGTCCGAAGAGTTGGACGCAGAAGGACATGGACAATGCGCTGGAGGCGCTGCGGAAACACAACATGAGCCTCACCAAGGCATCGGCGACGTACGGCATTCCGTCAACGACGCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCCAAGAAGGACGGCGCCGCCAAGTCCTGGACCGAGGACGACCTGCGCGCCGCCCTGCACGCGCTGCGGGCCGGCGCCATATCAGCCAATAAGGCCAGCAAGGCTTATGGCATCCCGAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGTCTGTCGGCGCCCTTCAACGCCGCGCCCACCGCCTGGCGCCGCGCCGACCTCCAGCGCGCGCTCGCCTGCATCCGCGCCGGCGCCGCCACCGTGCAGCGCGCCGCCACCGCCTACGGCATCCCCACCGGCACCCTGTACGGTCGGTGCAAGCGCGAGGGCATCGAGTTGTCCCGCTCCAACCCCACGCCGTGGTCCGAGACCGCCATGGTGGAAGCACTGGAAGCTGTCAGGGTGGGTCAGATGTCCATCAATCAGGCGGCGATACATTACAATTTGCCGTATTCTTCGCTGTACGGCAGGTTTAAGAGATGCAAGTATCAAAATCAGTTACAAGCTACCCAGCAACTACAGCAACAAGATGTACAAAAACCACAAGAAGTCGACCAACAGGCGCAGCAATTATACTATCAGCAGTTACCACCTTCCGTCCACCACCCGGCCGACGATACCGTCCCGCTATACACGCAGTACGCACACACCTCACACGAGTATTCCGAACCTATGTACTACAACAACTTCACTAGTGTGGTCACCAGCTGA
- Protein Sequence
- MPGDGLSRVKNEPLSEEEDSNSFVHSYLSNQVSSEESHVVTFGTEYLRSENAPSHLMHPLHGSGLEELVPLAPAGPAATPVCVKQEPSEPAPALTLETLEPATHSAEGAALIDRHLALLNASDVPDEFMPLISVKDEPLSEGEQQQLSGEDTSDSCGTQPETSTRGSPKSWTQKDMDNALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKDGAAKSWTEDDLRAALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLQRALACIRAGAATVQRAATAYGIPTGTLYGRCKREGIELSRSNPTPWSETAMVEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQNQLQATQQLQQQDVQKPQEVDQQAQQLYYQQLPPSVHHPADDTVPLYTQYAHTSHEYSEPMYYNNFTSVVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00063500;
- 90% Identity
- -
- 80% Identity
- -