Hvir013661.1
Basic Information
- Insect
- Heliothis virescens
- Gene Symbol
- zfy1
- Assembly
- GCA_002382865.1
- Location
- NWSH01002557.1:29210-42048[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.055 3.3 8.1 1.7 1 23 185 207 185 207 0.97 2 12 0.0069 0.41 10.9 2.0 1 23 214 236 214 236 0.98 3 12 0.43 26 5.3 0.8 1 15 240 254 240 263 0.82 4 12 2.9e-06 0.00018 21.6 2.0 1 23 268 291 268 291 0.94 5 12 0.0014 0.082 13.2 0.8 2 23 298 319 297 319 0.97 6 12 1.5e-05 0.00088 19.4 1.1 2 23 333 354 333 354 0.98 7 12 0.12 7.2 7.0 1.3 3 23 360 381 358 381 0.95 8 12 0.00024 0.014 15.6 1.5 2 23 392 414 392 414 0.96 9 12 0.11 6.5 7.2 0.5 1 23 421 444 421 444 0.92 10 12 0.0016 0.096 12.9 0.1 6 23 457 475 456 475 0.94 11 12 1.3e-05 0.00075 19.6 2.0 1 23 484 506 484 506 0.98 12 12 0.001 0.061 13.6 0.4 1 23 511 534 511 534 0.95
Sequence Information
- Coding Sequence
- ATGGAAGACTCCGTAGCAGAGCCGACTTTAGTGGAAATAACTGTGAAACCTGAACCTATGGACTTTGAGGAACCTGAGAATAGTGGAAATAGTGAAGATAAACAACCAACTGGAGtaaaagaagaagaaatatgGATAAAATCGGAGCCGATTGAGGTTGAATCTCAAAATTCCGTCGAGAGAGAAGAGCAGGAGACACAATCTGAAAATGAAAGCAGTTCATCTGAGGAAGATGATGGCAAgaATGAGACCAAAGATCTGAAGTCAAAATCGCCGAAAAAGTCGTCGAAGAAGAAATTGGATGAAGAAGTAAAATTGGAGAATGAAATCAAGGAAGAAGATGGAAAGTCCTCTGAGAATCAAGAAACTAAAGATGAAAAGAACGCCACTGAAACTAGCAATGAGCAGCCAGCGGAAAATACTCAGCCTAAGATGGAAACCCACCTCATGTATTCATACGAGGtgacaaaaaacattgaaatagtGACCATCAATGAGGAGGAACGGCAGAAGGAGTACGAGGAGACCCTGAAGACTCGCCAGCATATGCGGCATGTGTGCGAGCACTGTGCTGTCGGCTTCGTGCTTAAGCATGCATATGACGTGCATATGAAGGTGCACTCGCCTGAATCAGGTGACTACGAATGCCTGATCTGCCACTCCCGGCTGAAGACAGCAGACATGCTGTACCGCCACCGGCTGCGTCATTACCGCCGGTACCGGTGCCTGCTGTGCTGGATGCGGTTCAAGGATAAGGATACTGCGGCCTGCCATGTCATGAACGATCATACTGGAGAGAGTTTCGAGTGTGATCATTGTGGGAGGGGGTTTAAACGTCCTCAATACCTGAAGCGTCACGTAGAGCAGTACCACACGAAGCCGCACCGCCTCGTGTGCGGCGTCTGCTTCCGAGTGTTCCACGAGCGCGGCTGGTACAGGTCGCATATCAGAACACATAACGAAGAAGTGAGGGCCAAGACGGTGCGACTGCCAGCTACCTGCGAGATCTGTTCCCGTGACTATAAGAACAAGGCCAGCCTGAAACGTCATTTGCTCACTCATGATGAAGACGTAAATTGTGACATCTGTTATGAGAAGTGTAAGAATAGAATCACATTGGGACAGCATTATTTGAAGGTGCACAATGAGAAATATGTTGGCGCGCACGAGGAGACGTGCCCGCAGTGCGAGCGCGTGTGCGCCACGCGCGCCATGCTCAAGCGCCACGTGCAGCGGATGCACTCCGATAGGACTAAGAAATACCAGTGCGACTACTGCCAGCGGCTGTACCTGACGAAGGGCGAGGTGCGGTCGCACATCACGTGGTCGCACATGCCGCTGCACGCGCGCGGCGGGCACGGCTGCGCGTGCGGGCGCGTGTTCCGCACGCCGTCGCTGCTGCGCGACCACGCCGCGCGCTTCCACGCGCCCGAGCCGCCGCCGCGCGTGCACCAGTGCGACGTCTGCGATAAGGCTTTTGcgAACAAACAAGTCCTAAACCGCCACAAGAAGAGTCACTCAAACGAGATGTATCCCTGCAACGAATGTGGCCTACTCTTCAAGACCCAACCATACGTAAAAGTGCATTACCAGCTCAAACACCTGAACATGACACGAGCTGAAATCAACGCGCAAAGGAAAGCCAACAGAAATAAACCAAACATGCATAAAACCACCAATTGGGAACCGCCCATTTcgaataaaaagaaaagtaCAACTGCTGCCAAAAATGCGGAAGACCCCCTTCTGGTTCAAGAGAGTGAAATTCAAGTCAAAATTGAAAGGGAGGAAGATCTTCAGGTCCCGACTTTCCAAACTTTTGCGGATATTTCTCGGGAATAA
- Protein Sequence
- MEDSVAEPTLVEITVKPEPMDFEEPENSGNSEDKQPTGVKEEEIWIKSEPIEVESQNSVEREEQETQSENESSSSEEDDGKNETKDLKSKSPKKSSKKKLDEEVKLENEIKEEDGKSSENQETKDEKNATETSNEQPAENTQPKMETHLMYSYEVTKNIEIVTINEEERQKEYEETLKTRQHMRHVCEHCAVGFVLKHAYDVHMKVHSPESGDYECLICHSRLKTADMLYRHRLRHYRRYRCLLCWMRFKDKDTAACHVMNDHTGESFECDHCGRGFKRPQYLKRHVEQYHTKPHRLVCGVCFRVFHERGWYRSHIRTHNEEVRAKTVRLPATCEICSRDYKNKASLKRHLLTHDEDVNCDICYEKCKNRITLGQHYLKVHNEKYVGAHEETCPQCERVCATRAMLKRHVQRMHSDRTKKYQCDYCQRLYLTKGEVRSHITWSHMPLHARGGHGCACGRVFRTPSLLRDHAARFHAPEPPPRVHQCDVCDKAFANKQVLNRHKKSHSNEMYPCNECGLLFKTQPYVKVHYQLKHLNMTRAEINAQRKANRNKPNMHKTTNWEPPISNKKKSTTAAKNAEDPLLVQESEIQVKIEREEDLQVPTFQTFADISRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00783833; iTF_00784667; iTF_00785467;
- 90% Identity
- -
- 80% Identity
- -