Hzea007994.1
Basic Information
- Insect
- Helicoverpa zea
- Gene Symbol
- zfy1
- Assembly
- GCA_002150865.1
- Location
- KZ116825.1:437924-454411[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.059 4.2 8.1 1.7 1 23 185 207 185 207 0.97 2 12 0.054 3.8 8.2 3.7 1 23 214 236 214 236 0.97 3 12 0.39 28 5.5 1.0 1 15 240 254 240 263 0.82 4 12 3.2e-06 0.00022 21.5 2.0 1 23 268 291 268 291 0.94 5 12 0.0015 0.1 13.1 0.8 2 23 298 319 297 319 0.97 6 12 1.6e-05 0.0011 19.4 1.1 2 23 333 354 333 354 0.98 7 12 0.16 11 6.7 3.1 3 23 360 381 358 381 0.95 8 12 0.0004 0.028 14.9 1.5 2 23 392 414 392 414 0.96 9 12 0.12 8.3 7.2 0.5 1 23 421 444 421 444 0.92 10 12 0.00085 0.06 13.9 0.1 6 23 455 473 454 473 0.96 11 12 4.7e-05 0.0033 17.9 1.9 1 23 482 504 482 504 0.98 12 12 0.0011 0.078 13.6 0.4 1 23 509 532 509 532 0.95
Sequence Information
- Coding Sequence
- ATGGAAGACACAGTAAAAGCCCCGCTTTTAGTGGAAGTAACTGTGAAACCTGAACCTATGGACGTCGAGGAACCAGAAGATAGTGAAAATAGCGGAAAAAAACAATCTACTACAGtcaAAGATGAAGAAGTATGGATAAAACCAGAGCCAACTGAGATTGAACCTCAAAATTCTGATGAGAAAGAGGATCAGGAGGCAGAATCTGAATCTGACAGCAGTTCTGACGAAGATGAGGACAAGAATGAGACCAAAGATCTGAAGTCAAAATCTCCGAAAAAGTCGCTGAAGAAGAAATTGCATGAAGAAGTCAAATTGGAGAATGATGTCAAGGAAGAAGATGGGAAGGCGACCTCTGAGAAAACGGACAATAAGGATGAAAAGaaaaccACTGAAAATAGCGATGAGAAACAAGCGGATAATACTCAGCCTAAGATGGAAACCCCCCTAATGTACTCCTACGAGGTGACAAAAAACATAGAAATAGTGACAATCAACGAGGAGGAACGGCAGAAGGAATACGAGGAGACGCTGAAGACTCGTCAGCATATGCGGCACGTGTGCGAACACTGCGCCGTCGGCTTCGTGCTCAAGCATGCCTATGATGTGCATATGAAGGTGCATTCCCCTGCTTCAGGCGACCACGAATGCCTAATCTGCCACTCCCGTCTGAAAACAGCGGACATGTTATACCGTCACCGCCTACGTCACTACCGGCGGTACCGCTGTCTACTGTGCTGGACGCGGTTCAAGGACAAAGATACGGCCGCGTGCCATGTCATGAACGATCATACGGGGGAGACTTTCGAGTGTGATCATTGTGGACGCGGGTTTAAACGTCCTCAATACCTGAAGCGGCACGTGGAACAGTACCACACGAAGCCGCACCGGCTTGTATGCGGCGTCTGCTTCCGAGTGTTCCACGAGCGAGGCTGGTACAGGTCTCATATCAGAACACACAATGAAGAAGTGAGAGCCAAAACGGTGAGACTCCCCGCTACCTGCGAGATCTGCTCCCGTGACTACAAGAACAAAGCCAGCCTGAAACGTCATTTGCTCACTCACGACGAAGACGTACACTGTGACATCTGTTACGAGAAGTGTAAGAATAGGATCACTTTGGGCAGACATTATTTGAAGGTGCATAATGAGAAGTATGTTGGCACGGACGAGGAAACGTGTCCGCTGTGCTCGCGCGTGTGCGCGACGCGTGCCATGCTCAAGCGTCACGTGCAGCGCATGCACGAAGACAGGACCAAGAAGTACCAATGCGACTACTGCCAGCGGCTATACCTGACCAAAGGCGAGGTTCGATCGCACATCACGTGGTCTCACATGCCGGGCTCGCGCGGCCATACGTGCGCGTGTGGCCGGGTGTTCCGCACCCCCTCGCTGCTTCGCGACCATACGGCGAGGTTCCACGCGGCTGAACCGCCTCCCAGGGTGCATCAGTGTGATGTCTGTGAAAAGGCTTTTGCGAACAAGCAAGTTCTAAACCGCCACAAGAAGAGTCATTCAAACGAGATGTACCCTTGCAACGAATGTGGACTACTCTTCAAAACTCAGCCTTACGTAAAGGTGCATTACCAACTCAAACATCTGAACATGACTCGAGCCGAAATCAACGCCCAAAGAAAAGCGAACAGAAACAAACCTATACACACTAACATACATAAAACCACGAATTGGGAACCGCCCATTTCGAAAAAGAAGAGTACAACTGCAGTTGAGAAGGCAGAAGATCCCCTTTTGGTAAAAGAAAGTGAAATTCAGATTAAAGTTGAGAGGGAAGATGAGCTTCAAGTCCCAACCTTCCAGACTTTTGTTGATATTTCTCGGAATAGCGATTGA
- Protein Sequence
- MEDTVKAPLLVEVTVKPEPMDVEEPEDSENSGKKQSTTVKDEEVWIKPEPTEIEPQNSDEKEDQEAESESDSSSDEDEDKNETKDLKSKSPKKSLKKKLHEEVKLENDVKEEDGKATSEKTDNKDEKKTTENSDEKQADNTQPKMETPLMYSYEVTKNIEIVTINEEERQKEYEETLKTRQHMRHVCEHCAVGFVLKHAYDVHMKVHSPASGDHECLICHSRLKTADMLYRHRLRHYRRYRCLLCWTRFKDKDTAACHVMNDHTGETFECDHCGRGFKRPQYLKRHVEQYHTKPHRLVCGVCFRVFHERGWYRSHIRTHNEEVRAKTVRLPATCEICSRDYKNKASLKRHLLTHDEDVHCDICYEKCKNRITLGRHYLKVHNEKYVGTDEETCPLCSRVCATRAMLKRHVQRMHEDRTKKYQCDYCQRLYLTKGEVRSHITWSHMPGSRGHTCACGRVFRTPSLLRDHTARFHAAEPPPRVHQCDVCEKAFANKQVLNRHKKSHSNEMYPCNECGLLFKTQPYVKVHYQLKHLNMTRAEINAQRKANRNKPIHTNIHKTTNWEPPISKKKSTTAVEKAEDPLLVKESEIQIKVEREDELQVPTFQTFVDISRNSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786249;
- 90% Identity
- iTF_00783833;
- 80% Identity
- -