Hvir000520.1
Basic Information
- Insect
- Heliothis virescens
- Gene Symbol
- -
- Assembly
- GCA_002382865.1
- Location
- NWSH01000996.1:6501-10650[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0056 6.4 6.6 2.6 18 43 9 31 6 32 0.94 2 21 0.018 21 5.0 0.1 16 44 35 60 32 60 0.85 3 21 0.0011 1.2 8.9 0.0 18 43 68 90 63 91 0.90 4 21 5.4e-05 0.062 13.1 1.3 17 44 98 122 95 122 0.91 5 21 0.001 1.1 9.0 1.0 18 43 129 151 127 152 0.94 6 21 1.6e-05 0.018 14.8 1.3 14 43 156 182 153 183 0.90 7 21 0.0014 1.6 8.5 0.3 17 44 188 212 184 212 0.89 8 21 0.0084 9.6 6.1 2.0 18 29 220 231 214 243 0.75 9 21 0.17 2e+02 1.9 0.4 12 43 248 276 236 277 0.76 10 21 0.62 7.1e+02 0.1 0.8 14 43 298 324 288 325 0.72 11 21 2.3 2.7e+03 -1.8 2.0 18 32 332 351 315 356 0.66 12 21 0.15 1.8e+02 2.0 1.2 15 27 358 370 352 384 0.81 13 21 0.018 21 5.0 4.7 16 43 404 428 396 429 0.86 14 21 1.2 1.4e+03 -0.8 8.9 12 29 429 446 421 458 0.70 15 21 0.0009 1 9.2 4.0 13 43 459 486 451 487 0.78 16 21 0.034 39 4.1 0.8 17 44 492 516 488 516 0.85 17 21 0.27 3.1e+02 1.2 0.8 18 28 523 533 519 545 0.84 18 21 3.1 3.6e+03 -2.2 0.4 35 43 567 575 554 576 0.81 19 21 9.9 1.1e+04 -3.8 0.1 16 28 581 593 577 595 0.76 20 21 7.9e-05 0.091 12.5 2.5 6 43 605 641 604 642 0.79 21 21 0.019 22 4.9 0.0 15 40 659 686 649 689 0.86
Sequence Information
- Coding Sequence
- atgtACGCAAACACACTAGACTTCGTTTGCGATTATTGCTCGCGAACTTTCACCAGAAAATACAACTTACAGACACATATAGAAAACTGTCATATAAATTCTTCATGTCAATGTGATATTTGCGGCCAAAATTTCGGCAGCCCAGCCGGCTTGCTGCAACATCTAGCTCGCGGCCATAACAGTTACAGTCAACCATTTCCCGAGTGCGAATTATGTGGTCGAATTTTCACTAGAAAACAGAACATCGTCTCTCATATGATCACTGTACATCTACAAGGGCTAGGATACGAAATAAAGTGTAGATTATGCGATAAGACATTCACGACTGAGCGGAATTTGAAGCGACATATGAATCAGTTACATAACCCCGATATAGAGTACCCTACGTGCAATGATTGTCATAAGGTGTTTAGAGGCAAGCATTCCTTGATTGCTCATATACAATCAGTGCATACGGTGACGGAAAAAGATGTGATAAAATGCCATCTTTGTGAGAAAGTTTACACCAATAATCGCAACTTGAAGAGACATATCGAGATGTTCCATGGCGAAAAGGGTGAGTTCAAATGTGATATTTGTCCGAAAGTCTATACCTCTAACCAGAGTTTGCGACGCCATGCTAGAACTAGACACAGCACAGACAACCAAGATCAATTCACTTGTAATTACTGTATGAAAGTGATAATTGGTAGAGAGAATTATGAAAGCCATATACAATTCCACCACCAAGAACcggaaattgaaataaaaactgaatttgTTTGCGAGACATGCGGAGAAAGCTTTGCAGAAGAACCTTATTTAAGACAGCATGTAAAAAGCGAGCATTCGTTCAAAACGTTCTATAAATACTGTAAGAAGTCCTTATTAAAACAGTATAAGGTAGATAATCATACGGTATATAATTGCGAATTCTGTCAGAGTTCATTTTTGACGGTCTACGAACTTAAAGACCATATGCGCTTAAACCATGATACGGAATACTCTCTGTCAACTTGCAATGTGTGCTTCAATAAGTTTTTTAGCAAAGAATCTATGTCTGCACATAAAACTGTATGCTTACCTCCTGCCAACGTTAATAAGTGCAGCCATTGTGATAAATTATTCACTGATATATCCAGCTTAGAGTTTCATACTCGAATCTTTCATCCACAAGCCCAAATCGCTGATTCTAATATATCTTCGACTAATATTGAAGATGAATCAGTATCTTTCAAATGTAAGCATTGCGACCGTATATATTACAGCGACAGATCTCTTAAACATCATATAAAACTCAAACACACAACTGACGAGGAGGTAGAATGCGAATTATGCGGTAAAATATGCAGCAACAAGTATTATTTAGCGTCTCATATCAAAATCGTTCATAACAACGATTCGTGGTCTCGTTGCGAGTACTGTGAGAAGCAATTCAAATCTAAGAGGAATATACGGCGTCATATTGAGTATACTCATTTAGGAATGCAAAGGTACAAGTGTATCGAATGCGAAACTCTTTTTAAGGAGAAAAGGAGTCTCAGAAAGCATGTTAGGACGAAGCACCCTAACTCCACAGCGTTTCCACAATGCCATATCTGTCATAAGCGCTTCGAATCGGCAAAATCTTGCAAAATCCATCTCAAATTGCTACACTCTTTTAATATGAACACCTATCCTTGCCATTTGTGCTCCGTTTCTTTCGGTTCAAACGAAGCTTTGACTATTCACCTCGAAACGAAACACTTGGCCGAAGATGAGATATATAAATGCGAGGAATGCAACTTAGTTTTTAAGGGACACGAGAAATTTGACGCACACAACGATGTCTGCCACGTTAATTTAGTTCCTAACATAAAGCAGAAGGTCTTGCCTCGCTGTATTCTCTGTATGAAAGATTTTAGCACCAGAAAGACTTTAAAACGACATATAAAGAAGTTTCATGAAGATTTTGATGTGGACGAATTAGCTACATTTGGGTCTAGGCGCCGCACATTCACAGTGGACTGCGAGAACTGTATGAAAAATTTCAATGATGATTTCTATCTTAATGTGTACAACAAATTGAAACATTTAAGAGATTCTGTTGTATTTAAATGTGAGTCCTGTTTCGTGTCGTATAGCTCGCTAGAATTTGCGATTCAGAGGTATAAAGTGTCCAATTCAGATGGGTGTAAAAGCAAAATGATTCTTAGTGAGCTTTGTACGGCAGAAATGAGCGAAGAAGAGAATGATTTTTCTCATTTTGGGGCGTTACATGATATGTTGCCTGAGAGTACGACGGCTGATATAAAATTGGAGCCTGTTGAAGAGCTCAATGAGATACAAATTAAGTTGGAACCAGCGTCTCCATGA
- Protein Sequence
- MYANTLDFVCDYCSRTFTRKYNLQTHIENCHINSSCQCDICGQNFGSPAGLLQHLARGHNSYSQPFPECELCGRIFTRKQNIVSHMITVHLQGLGYEIKCRLCDKTFTTERNLKRHMNQLHNPDIEYPTCNDCHKVFRGKHSLIAHIQSVHTVTEKDVIKCHLCEKVYTNNRNLKRHIEMFHGEKGEFKCDICPKVYTSNQSLRRHARTRHSTDNQDQFTCNYCMKVIIGRENYESHIQFHHQEPEIEIKTEFVCETCGESFAEEPYLRQHVKSEHSFKTFYKYCKKSLLKQYKVDNHTVYNCEFCQSSFLTVYELKDHMRLNHDTEYSLSTCNVCFNKFFSKESMSAHKTVCLPPANVNKCSHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNIEDESVSFKCKHCDRIYYSDRSLKHHIKLKHTTDEEVECELCGKICSNKYYLASHIKIVHNNDSWSRCEYCEKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSTAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFGSNEALTIHLETKHLAEDEIYKCEECNLVFKGHEKFDAHNDVCHVNLVPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHEDFDVDELATFGSRRRTFTVDCENCMKNFNDDFYLNVYNKLKHLRDSVVFKCESCFVSYSSLEFAIQRYKVSNSDGCKSKMILSELCTAEMSEEENDFSHFGALHDMLPESTTADIKLEPVEELNEIQIKLEPASP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00447464;
- 90% Identity
- iTF_00785380; iTF_00786176; iTF_00783735; iTF_00784586; iTF_00783726;
- 80% Identity
- iTF_00786176;