Hvir012905.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliothis virescens
Gene Symbol
bab2
Assembly
GCA_002382865.1
Location
NWSH01006130.1:20820-25164[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-29 9.3e-27 93.1 0.1 1 103 37 135 37 141 0.94

Sequence Information

Coding Sequence
ATGCCGGCCGAGGAGGACCCCGCGGCGATGGAGTGTCGGGAGCCGGTCGACTCACCGCAGCAGTTCTGCTTGCGGTGGAACAACTACCAGAGCAACTTGACCAGCAGCTTTGACCAACTTTTGCAAACTCAATCTTTCGTGGATGTGACTCTATCTTGCGATGGACAAAGTTTGAAAGCACACAAAGTGGTTCTGTCGGCGTGCAGCCCGTACTTTCAGTCATTGTTTATGGACAATCCCTGCCAGCATCCGATCATAATAATGCGTGACACAAAATATTGCGACCTGAAAGCTGCCGTGGATTTTATGTACCGGGGCGAGATCAACGTGTCCCAGGAGCAGATACCGGCGCTGCTGAAAGTGGCGGAGTCGCTTAAGATCCGCGGGCTGACGGACGTGAGCGGCGACCACGCCGTGGTGCAGCCGGGCACGCGCAGCACCAAGCGGCCGGACCGGAGCCGGGAGGCCGACTCGCCGCCCAAGGCGCGGCGCCGCATGTCGGAGGACCGCGCCAGCGGGGGCTCGAGCCGGGCACCGCCACCGACCCCCAGCCCCACGCCCGCCGCCGACCTGCTGCCGCCGGCCGAGCccgccagcgccgcgcccgTGCTGCCGCCGCTGCACCCCGACGACGTGGACATCCGGCCCGGCATCGCCGAGATGATCCGCGAGGAGGAGCGGGTGAGTCCTGGCCGCGCCGCACCGCGCTGCTCTTAA
Protein Sequence
MPAEEDPAAMECREPVDSPQQFCLRWNNYQSNLTSSFDQLLQTQSFVDVTLSCDGQSLKAHKVVLSACSPYFQSLFMDNPCQHPIIIMRDTKYCDLKAAVDFMYRGEINVSQEQIPALLKVAESLKIRGLTDVSGDHAVVQPGTRSTKRPDRSREADSPPKARRRMSEDRASGGSSRAPPPTPSPTPAADLLPPAEPASAAPVLPPLHPDDVDIRPGIAEMIREEERVSPGRAAPRCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00709378; iTF_01230757; iTF_00888399; iTF_00783654; iTF_00173200; iTF_00794790; iTF_00932774; iTF_00889367; iTF_00931582; iTF_00785320; iTF_01332938; iTF_01426028; iTF_01075629; iTF_01264814; iTF_01361774; iTF_01425228; iTF_01362511; iTF_01360817; iTF_00823155; iTF_00345938; iTF_01029394; iTF_01027472; iTF_01026454; iTF_01031254; iTF_00850905; iTF_01117476; iTF_01119501; iTF_00111791; iTF_00772144; iTF_00300374; iTF_01118455; iTF_01538899; iTF_00273738; iTF_00171966; iTF_01076660; iTF_00282549; iTF_00869787; iTF_00281504; iTF_01152299; iTF_01197909; iTF_00712055; iTF_00928833; iTF_01063877; iTF_00809294; iTF_00274543; iTF_01084400; iTF_00685587; iTF_01062003; iTF_01085523; iTF_01064791; iTF_00810236; iTF_01527463; iTF_00147649; iTF_00745922; iTF_01094179; iTF_00374340; iTF_00364168; iTF_01441224; iTF_01093258; iTF_00425579; iTF_00924907; iTF_00122543; iTF_00908047; iTF_00018288; iTF_00121585; iTF_01285682; iTF_00123507; iTF_01339059; iTF_00050068; iTF_00375445; iTF_00622966; iTF_01440214; iTF_00449303; iTF_01526199; iTF_00037947; iTF_00124412; iTF_00758396; iTF_00906300; iTF_00038973; iTF_00907165; iTF_01340349; iTF_00036958; iTF_01342334; iTF_00237888; iTF_00001290; iTF_00000451; iTF_01533198; iTF_01535054; iTF_00120656; iTF_01247243; iTF_00383827; iTF_00445337; iTF_00446353; iTF_00447382; iTF_00041023; iTF_00042786; iTF_00041925; iTF_00043696; iTF_00040017; iTF_01073720; iTF_00622102; iTF_01532237; iTF_00177306; iTF_00908986; iTF_00405128; iTF_00636626; iTF_00441653; iTF_00637814; iTF_01166846; iTF_00951962; iTF_00851947; iTF_00973908; iTF_01173402; iTF_01028443; iTF_01180414; iTF_01179593; iTF_00823999; iTF_00822095; iTF_00302265; iTF_00831362; iTF_00301326; iTF_00185440; iTF_01487827; iTF_00327188; iTF_01221722; iTF_00186400; iTF_00450290;
90% Identity
iTF_00273738;
80% Identity
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