Basic Information

Insect: Heliothis peltigera
Gene Symbol: RREB1
Assembly: GCA_958496145.1
Location: OY292344.1:5005017-5020010[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.074 4.8 8.2 0.5 1 23 94 117 94 117 0.94

2 11 0.022 1.4 9.8 0.1 1 23 308 330 308 330 0.97

3 11 0.0012 0.078 13.8 0.4 1 23 339 361 339 361 0.99

4 11 0.00074 0.048 14.5 2.0 1 23 367 390 367 390 0.97

5 11 0.003 0.19 12.6 1.6 1 23 744 767 744 767 0.96

6 11 0.00025 0.016 16.0 1.3 2 23 962 983 961 983 0.97

7 11 0.11 7.2 7.6 6.5 1 23 989 1012 989 1012 0.97

8 11 0.11 7.4 7.6 1.4 1 23 1045 1069 1045 1069 0.90

9 11 0.014 0.92 10.5 0.2 1 23 1093 1116 1093 1116 0.97

10 11 0.023 1.5 9.8 0.3 2 23 1156 1177 1155 1177 0.92

11 11 0.028 1.8 9.5 5.3 1 23 1183 1205 1183 1205 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.074	4.8	8.2	0.5	1	23	94	117	94	117	0.94
2	11	0.022	1.4	9.8	0.1	1	23	308	330	308	330	0.97
3	11	0.0012	0.078	13.8	0.4	1	23	339	361	339	361	0.99
4	11	0.00074	0.048	14.5	2.0	1	23	367	390	367	390	0.97
5	11	0.003	0.19	12.6	1.6	1	23	744	767	744	767	0.96
6	11	0.00025	0.016	16.0	1.3	2	23	962	983	961	983	0.97
7	11	0.11	7.2	7.6	6.5	1	23	989	1012	989	1012	0.97
8	11	0.11	7.4	7.6	1.4	1	23	1045	1069	1045	1069	0.90
9	11	0.014	0.92	10.5	0.2	1	23	1093	1116	1093	1116	0.97
10	11	0.023	1.5	9.8	0.3	2	23	1156	1177	1155	1177	0.92
11	11	0.028	1.8	9.5	5.3	1	23	1183	1205	1183	1205	0.97

Sequence Information

Coding Sequence: ATGCAGGGTGCTGCCACTGCGCCCGCGCCTCCCGCGGCTGAGCCGCCTTCCACGCAACAAATCAAAACAGAGGAGGTCATCAGTGAAGCTAAAATCGAGGCCGACGAAGAAATGGACAGCGTTCAAATTGAAAAGCAAGAACTCCGCGTCACTAGGACGACGAGCATCGACAGTGACAACCGATCTGACAGAAGCGAGGAGGAAGACTTACGAAGAGCGCGCAAACGAGCTGCCTCTACCTCACCGTCACCCATCCCCATGGACAAGAGAACTGCAAGATTCGAGTGTCCCAAGTGCCGACAGCGGTTTGACTCTGTCAACGCTTTCGACATCCACCGATTCACGGCGCACAGTGACAATACCAAAACCGGCTTTGACGATCTAACATTCGTTGATTTCTCCAGCAAGAAGTTCCCCGAAATTGCCAGAGGAGTCTGCGAGAGGAACCCGCACGTGTCAGTGACGGAACAGCGTTACAGATGCGACATGTGCTGCAGAGACTTCCCATGCGGACAAGCTTTGGAAATGCACAGGAAGTCATGCGCCTCGACCACGCGGATTCCTACCCCTGAAAGGGACCGCACGAGGGAAGACTTCTTTGCCAAATTAGATCTAAAGAACAGATCTTTTGGTATACCTGGCACGTTAACCCCACCAATGGAAAGATTCACACCTAAATTCGATGATGGTCATCTTACCAACGGCATCAGGCACATCGATGCCGCTCGCGATTTGGCAGATATTCAATCGATATTAAGTGTCACGTCAGCTGGCGGCCTTTTAGAAAGGCTTACTGGCACAAGAGTGGCTTTAGAAAGCTCAGTTCTAACCCCGCCTGATACCATTACTAAGGATAGAGATCAAGAGGAAACTCAAGACAATTTCGCAGCAGAGTTCAGGCGAATGAAGCTACGTGGAGAGTTCCCTTGCAGGCTGTGCCCCGCTAAGTTCCCCAATCTTAGAGCTTTGAAGGGGCACAACAGGGTGCACTTGAGTGGAACGGGCCCGGGACCTTATCAATGCAACATGTGTCCTCATGCCTCTTTAGACAAAGCAGCGTTAGTACGTCACATGCGCACACATAACGGAGACAGGCCGTACGAATGCGCCGTCTGTAACTATGCTTTTACAACCAAAGCTAACTGTGAGCGTCATTTGAGAAACAGACACGCCAAAGTTACAAGAGAAGATGTTAAACGATCAATAATTTACCATCCATCTGAAGATCCCAACAATGACGAAGTGAACTCAAAACTCGCAAGAGATGAAGTGAAGAGATCACTTGCCTTCCACACTCCTGATATCGATAGGCGAAATGAAATTACCGGACGTGATACGCCTTTGACACACTTTACCCCAAGTTTTATTACTGACAGACATCCTGTCACTAACTTAGCGACCAAACCGTTACCATTGCCATTACCAGAGTCTCCTTTACCTTTACCTATTACAAGAGACTCAGAACAGCCCGCTCCTCGAATTAAAGTGAAGGGAATCGGTCAGTTAACCCAAATACCTGAGTTCAGGCCACCAGAAATCACTTACAAACAGAATGATATTTCACACGATTCGTACGATGAAGAAGCTCCGGTAGACTTGAGCACGAGTGACAACAATAGTTGTGATGTTCTTGATCTTAGTAAGAAGAAACGTGACGCTGATGCTGAGGAGCCGAAATCTACACCACGTCCTTCTTTCGAGCCAGACCCGGCAAGCGTAGCCGCAACAGCACTGGAGAAGACTAGATTCCTCTTAGCTTCACAAAGACTTTTTGAAAACTCACTTCCTAAAATCGATCCCGCTTACTATGCCAGCCAGTTATCCCAGCTCTACGCTGGAACTGTACCAGGAATTCCTGGCTTACCTCTGCCCCCGTCCTTTCCTATCGCCCCATACTTACTTCAACCTTCGTTTTTTCATCACCCAACTGATTCTCGGGAACTTGCCGAAATAAAAGAACATATTCAAAAAGAAATCATTCGAGGCCTAAGTATGTCTGGCGGCAGACTTGTTCCTAATGATCCAGAAAGCCAGCCGAAACTTGAGCCTGAAGAAGATGAACCGAAGCCCCCGCCATCAGTTTCCCCGGTACCATCATCACACTCGGAATCTCCACGCCCACAAATGAATAACACTCTCGTCCCACAAACGGACTCAGTGAAGATGGTTATAAAGAACGGAGTTTTGATGCCCAAGCAAAAACAAAGAAGGTACAGAACTGAAAGACCTTTCTCATGCTCTCAATGTTCAGCGCGGTTTACGCTACGGTCCAACATGGAACGTCATGTGAAGCAGCAGCACCCCCAGCACTGGAGCGTCAGGAGACCGGCACCGAGGGCGCCACCACCGTACCCGACCCCTGACTCACTGAGTGACCGTATGAAGTTCGCTTTATTAGCTCGTCATCTTGAGAGGCCTTTACAACAATCCGAACATTCGCCCGTACGAAGAGATTCTGATGAAGTAGCCGACAACGAGGAAGATGAAGAGGATACCCTAGTAATAGACGAAGAACCCGAGACGGACAACAAAGCGGAAGATCATACTGCGGCGCGCCGTGCAGCCGCCGAAATCCTCATGGCTACGTGCCAACAGGAAATGACTAAAGACTTCGACCTTAAAATAGCTGGGAACTTGATCAACAAGCCTGTTCCTATTACCAATGACAAGACCGAGTCTGGAACTAATTCGGTTTCGCCGACTCAAGAACCTCTACCAGTACCTGTAGTGCCCACTCGTAGTGACGAGGAGGAAGATGAAGAGGGCTTAGTTGCCTCCACAAGCGAGGGAAACAACTCTGGGAGCGATGAAAACAAatcaGAGACAGACACTTCACTGCCACCAAAAAAGAAGTCGGCCTACAGCCTCGCACCTAACCGAGTGTCGTGTCCCTACTGCCACCGCAAGTTCCCGTGGTCATCCTCCCTCCGGCGCCATGTCCTCACGCACACAGGCCAGAAACCATTCAAGTGCCCACACTGTACACTTCTGTTCACCACTAAGTCAAACTGCGACCGTCACTTGCTGAGGAAGCATGGAGGTTCAGCAAGAGCGATACTAGCCGAACCGATCCCCGAGAGCGTGTCCCCACCTCAACCAGTAAACGACACCAGAGCGGTACCCGAGAGACCCTTCAAGTGTGTTTCTTGTCCCACCAGTACCTTTTCCTCGCTAGAAACGTTGAAGAAGCACATGTCTTCGAGGCACGGAGCAGATTCTCAACCGGGCTCTCCAAACCCTGAAATAGTtgaagaaacaaatgaaggtgGTCTTGTCTTCAAATGCCATTTATGCGAAGCGTCTTTCGGTGATAGAAGTGGAGCCCTATCTCATTTGGCGACGGGACATACTGCCGAATATGAGCAATTAGTCAGCAAAGGAGCCCTGGATGCTGCTAGTGACCGAAGTGAGAgcgctgatgatgatgaaagggGAAAGTTTCCTGACCATGCTAATAGAAAGGTGGTCTGCGCATTCTGTATCCGCCGATTCTGGTCAGCGGAGGATCTTCGGCGCCACATGAGAACTCATTCGGGCGAAAGGCCTTTCGCATGCGACCTGTGCAGACGTCGGTTCACGTTGAAGCACAGCATGCTGCGACATCGCAAGAAGCACAGGGAAGAAATCACGGATGATGAAGAGGGCTCACCCCCGAACACGCCGCTTGAAGATCCCGTGACTAATGGATTCCGCTACCAGGACGACGACGGCTCAGGCAGCGAAATCCCAAGCAACGTCAACAACAACAACTCTCCCCCCTCCGCTCCATACGAAAAGAAGCTCAAACTGGACATGACATCGCGCAAGTACTCCTCAGAGGCCGAAAATGACCCAGAAAACAGCGACCTCATTGGTAAACTGCTCGGAATACCAGACAAAACCATCAACAAACTACTCTCCTCCGCAGACGAAGCCGCCAAAATCCTTGGCGTGAATAAATGA
Protein Sequence: MQGAATAPAPPAAEPPSTQQIKTEEVISEAKIEADEEMDSVQIEKQELRVTRTTSIDSDNRSDRSEEEDLRRARKRAASTSPSPIPMDKRTARFECPKCRQRFDSVNAFDIHRFTAHSDNTKTGFDDLTFVDFSSKKFPEIARGVCERNPHVSVTEQRYRCDMCCRDFPCGQALEMHRKSCASTTRIPTPERDRTREDFFAKLDLKNRSFGIPGTLTPPMERFTPKFDDGHLTNGIRHIDAARDLADIQSILSVTSAGGLLERLTGTRVALESSVLTPPDTITKDRDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLAFHTPDIDRRNEITGRDTPLTHFTPSFITDRHPVTNLATKPLPLPLPESPLPLPITRDSEQPAPRIKVKGIGQLTQIPEFRPPEITYKQNDISHDSYDEEAPVDLSTSDNNSCDVLDLSKKKRDADAEEPKSTPRPSFEPDPASVAATALEKTRFLLASQRLFENSLPKIDPAYYASQLSQLYAGTVPGIPGLPLPPSFPIAPYLLQPSFFHHPTDSRELAEIKEHIQKEIIRGLSMSGGRLVPNDPESQPKLEPEEDEPKPPPSVSPVPSSHSESPRPQMNNTLVPQTDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPTPDSLSDRMKFALLARHLERPLQQSEHSPVRRDSDEVADNEEDEEDTLVIDEEPETDNKAEDHTAARRAAAEILMATCQQEMTKDFDLKIAGNLINKPVPITNDKTESGTNSVSPTQEPLPVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSETDTSLPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCTLLFTTKSNCDRHLLRKHGGSARAILAEPIPESVSPPQPVNDTRAVPERPFKCVSCPTSTFSSLETLKKHMSSRHGADSQPGSPNPEIVEETNEGGLVFKCHLCEASFGDRSGALSHLATGHTAEYEQLVSKGALDAASDRSESADDDERGKFPDHANRKVVCAFCIRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEITDDEEGSPPNTPLEDPVTNGFRYQDDDGSGSEIPSNVNNNNSPPSAPYEKKLKLDMTSRKYSSEAENDPENSDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_01533483;
80% Identity: -