Hpel004005.2
Basic Information
- Insect
- Heliothis peltigera
- Gene Symbol
- clz9
- Assembly
- GCA_958496145.1
- Location
- OY292325.1:3461281-3463716[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-09 1.6e-06 28.1 0.0 4 42 17 55 14 58 0.92 2 2 0.65 7.1e+02 0.4 0.0 26 37 716 727 714 732 0.81
Sequence Information
- Coding Sequence
- ATGCCTcgtacttatataaaaaagaaaaataaaacatacactTCTCAAGATTTAGCCACTGCCATACATAAAGTAAGAAATGGGGAGCTTACCGCATATGCTGCAGCACAAAAGTACAAGATTCCAATGACCACTCTTCATGACCATGTCAAAACTAAAGATACTCTTAGACAGAATGCAGGTAGACCAACTGTTCTACCTGTAGAAGACGAAAAAAAGTTAGCAAGCACCATCATAGTCATGGAGAAATGGGGATTTGGGCTCTCAAGATCAGAAATATTGGAGATTGTGGCTGAATATGTGCGCGTAAACAATATTCAGACACCATTTAAGAATAACACTCCTGGACCAGATTGGTTTATCAACTTCCGAAAACGTCACGGTTTGTCCATCAAAAAAGCACAACCCGTAGAATATGTGCGAAGAAAAATGACGGATCCATTCGTCATCGCTGAATATTTTGATTTGCTGATCTTACAAGATTTAAATCTTTTAGAAAATCCAGAATCGATTTGGAACTTGGACGAAACATCATTGTGTCTGGATCCGACCAAAACAAAAGTGgtcggaaaaaaaaataaaccatgtGCAAGGACCACCTATGGAAGTGGAAAGGAAAACATCACTGTGTTAGCAGGAGCGAGTGCCAGTGGTAAAAAGTTGCCGCCTTTGATTATTTTCAAAGGAAAATTTGTTTGGGACCAATGGATGGCTGATCTTAATAAGGATGATTACGATTTCGAATTAACATATGCTGCAAGTACTAAAGGTTGGATGGAAACAGAAATTTttcacaattattttgaaaaagtacTCATCCCAAGTCTCGGCGAAAAGCGACCAGCCCTTGTTATTTATGATGGACATTCAACGCACGTCGATGCCAGGGTTGTGGAGCTTGCGGTCCGAAACAATGTTACTATCCTCAAATTACCCCCACATACATCACATTTGTTGCAACCGCTTGATATATCAGTATTTAAATCTTTCAAAGCAATTTGGGATGCAAAACTGGTCGAGTGGCAGAGAAGAAACGTTGGTACGAAAATGCCAAAAAACGTTTTCGCAAAAACTATGGCAGACACTTGGCAACAAACGAACCCCGAAGTTATAAAGAGTGGATTTAAAAAGGCAGGAATATATCCTTTCAATGCACATGTCATACCTATTGATAAATACGATCCAGACGCTTATCAAAGATATAAGAAAACTTTACTTGCCCACTCGCTCAACCAGCCAAAGACACTAAAAGAAATATGCATTGAATCATTCAACAATCAGTTTGCAACAGCTAATGAAACGATAGAAATAACAGACAATAATTACGTTGCCCTGCTATCAGAACAAACAAGAAATAATGCCCAAATGTTGCCCTTTGAAGCCAGACACCCGAGCCAAGTACCAGCATGTTTGCAGAATCCGAATCCaacaaaatctaaaataaatataatttcaaacataataataaagaaagcATCGCAAGTATCATTTGAAGAATTATTGCTGCGAAAAATTCAGCAGGAAAAAAAGGATTctgttcaaacaaaaaaaaaacgtgtcaCAAAAGGTGCGGAAGTAATAACTGCAGATTTAggaaagaaaattttagaaGAAGTGAAAGAAACgaaaagtaagaaaattgcAACTAAAACCGGTAAAGCTAATGATAAACGAAAACGTAAACGGGAACCTTCCTCTGATACCACAAGTATATCCGATATCATCAGTAATCAAAGCGATTCTGACATTATTGATTGTATCGATTTTGAAGACTTGGACGATTGcgaagataattttaatttataccaGGAGGAGACAAGTTCACAGAAATCAAGAAAAGATAGGAAGTGTATTATAAACATGAAcaacgataaaaatataaccaatGAAAAGGCACTCGCTgataaaactacaaattatgtatgttcTAAGAAAGGCAAAGGTATTGGCAAAAAAAGCAAAGGTAAAGAAAATCAAGTAGACAAGAAAAACGAAAAGGAAGTATTGAGTTATTTTGCAAAAGGTGAGGAAAACATAAATCAGCAGATTGCAGAATATTCTAATGAAGAACCAATCTATAAATTACAGCTACAAGGAATTAAGAATAAAGAATTAGCAGAAAAGTATCCCGTTCTAAAGGAATGTTATGATATAAATGATACGGTCCTTGTCAGGTATTTCATAAGAAACAAATGGAAATATTATGTTGGGTTCATAGgaaaaataactaaacatGGAGAACATTTTTACTACcttattaactttttgaaaACCACGAGACGCCAGCAGCatcttacttttattgaacctaaaaaaaaagatactgACGAAATTCCTGAGTCGTTACTGGTAAAGAAGatagaattacaaaagaaaagagaTCAAGACAAAGAATATTACTTGACCCATGACGAAGACACTATTTATTTCgactga
- Protein Sequence
- MPRTYIKKKNKTYTSQDLATAIHKVRNGELTAYAAAQKYKIPMTTLHDHVKTKDTLRQNAGRPTVLPVEDEKKLASTIIVMEKWGFGLSRSEILEIVAEYVRVNNIQTPFKNNTPGPDWFINFRKRHGLSIKKAQPVEYVRRKMTDPFVIAEYFDLLILQDLNLLENPESIWNLDETSLCLDPTKTKVVGKKNKPCARTTYGSGKENITVLAGASASGKKLPPLIIFKGKFVWDQWMADLNKDDYDFELTYAASTKGWMETEIFHNYFEKVLIPSLGEKRPALVIYDGHSTHVDARVVELAVRNNVTILKLPPHTSHLLQPLDISVFKSFKAIWDAKLVEWQRRNVGTKMPKNVFAKTMADTWQQTNPEVIKSGFKKAGIYPFNAHVIPIDKYDPDAYQRYKKTLLAHSLNQPKTLKEICIESFNNQFATANETIEITDNNYVALLSEQTRNNAQMLPFEARHPSQVPACLQNPNPTKSKINIISNIIIKKASQVSFEELLLRKIQQEKKDSVQTKKKRVTKGAEVITADLGKKILEEVKETKSKKIATKTGKANDKRKRKREPSSDTTSISDIISNQSDSDIIDCIDFEDLDDCEDNFNLYQEETSSQKSRKDRKCIINMNNDKNITNEKALADKTTNYVCSKKGKGIGKKSKGKENQVDKKNEKEVLSYFAKGEENINQQIAEYSNEEPIYKLQLQGIKNKELAEKYPVLKECYDINDTVLVRYFIRNKWKYYVGFIGKITKHGEHFYYLINFLKTTRRQQHLTFIEPKKKDTDEIPESLLVKKIELQKKRDQDKEYYLTHDEDTIYFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01363042;
- 90% Identity
- iTF_00186102;
- 80% Identity
- -