Hpel002108.1
Basic Information
- Insect
- Heliothis peltigera
- Gene Symbol
- E2f2_1
- Assembly
- GCA_958496145.1
- Location
- OY292323.1:3996811-4011297[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-30 1.2e-26 92.6 0.1 2 64 125 187 124 188 0.98
Sequence Information
- Coding Sequence
- ATGCCGAGAGGGGTGAAGCGAGGGCCGGCGGAGGGCGAGGCCGAGGTGGTGGTACGCGCTACATCGTCTCCTTCGCATACCACGCTACTGGACGACAGCCCTAGCCAGCCCATCAGCTATCATCTGCTAGATCATGGCTATGGCGCCACGCCACAGCACCAGATCAGGCGCGAGGCGCCTACGGCACCGCCGAAGACGTCTGAAGCGGTGAAAAGAAGACTGAACCTAAGTGAGAGCAGTTCCGGCAGCCAAGGTCACGTGGTGCCCATGAAAGCCGACTTCAAGACGCCCAAACAGAAACGCGTCAAGGTTCTCACACCGTACAGTCGACCGTCCAGTTCTATGAAAAAGTACACCGAACGTTCCAGGTTTGACACATCATTAGGTTTACTCACAAAAAAGTTCGTTGCGTTGCTGAAGTCTTCGCCCAACGGCGTTCTAGACTTGAACATAGCAGCTGAACACTTATCGGTCCAAAAACGTCGTATCTACGACATCACAAACGTACTAGAGGGTATAGGAATATTAGAGAAgagatctaaaaataatatacaatggAAATATGGCGCGgaggcggcgggcggcggggcgcgcgcgcggcggctGCGGCGCGAGGTGCGCGCGCTGGCGGCGCGCGGGGCGCGCGTGGGGCGCGCGGTGGGCGTGGCGGAGCAGGCGCTGAGCGCGCTGTCGGCGGACCACGGCGCGCGCGCCTACATCACCTACGCCGACCTGCGCTCCATCCGCGACTTCCGCAACCAGACCGTCATACCTATCAAGGCGCCGCCCGACACACGCCTCAGCGTACCTCATCCTGACGAGAAAGGTTACATGATACATTTGAAATCTATGTCAGGTGAAATCGAAGTCTACCTCTGTCCAAAAGAACGTCCTCCTTCGCCCGCATCAACGTCGGGTGCGTTGCCTTCGGACCCGCTGCTGGAAGACAACAAGGCATTGCTGGCGCCGCTCATAGCGCTGCTGCAGTCCAAACCTTCTAGCTCAATCGCCGCTGACTTCACGACGCCAATAAAGCGCGAGCCGGTGAGGTCGAGGCCAGCGTCGCCGCAGGTGGCGGCGCCGCGCGTGACGGACCCCACCATGCCGCTGCCGcacgccgcgcccgccgcgcaCCCCGCGCCGCACACGCCGCACGACCACCACACCGCACACCACGACGCGCTGCACACCCCTGATAGCGCCGGCGCACGGGGTCGGCTGCGCAACGCTCTCATAGCAGACAGCGACGACTTCGCCCCCATCATGGGTGGCGGCCGCTTTCAGCTGCAGACGGAGGACCAGGAGTCAGAACCGCTGGAGTTGGAGCCGTTCCTGGCGCTGGAGCCGCCGATGTCGGCGACGGACTACGGCTTCTGCCTCGACCACGACGAGGGGCTCTCGGAACTGTTCGACTTCGAGTTCTAG
- Protein Sequence
- MPRGVKRGPAEGEAEVVVRATSSPSHTTLLDDSPSQPISYHLLDHGYGATPQHQIRREAPTAPPKTSEAVKRRLNLSESSSGSQGHVVPMKADFKTPKQKRVKVLTPYSRPSSSMKKYTERSRFDTSLGLLTKKFVALLKSSPNGVLDLNIAAEHLSVQKRRIYDITNVLEGIGILEKRSKNNIQWKYGAEAAGGGARARRLRREVRALAARGARVGRAVGVAEQALSALSADHGARAYITYADLRSIRDFRNQTVIPIKAPPDTRLSVPHPDEKGYMIHLKSMSGEIEVYLCPKERPPSPASTSGALPSDPLLEDNKALLAPLIALLQSKPSSSIAADFTTPIKREPVRSRPASPQVAAPRVTDPTMPLPHAAPAAHPAPHTPHDHHTAHHDALHTPDSAGARGRLRNALIADSDDFAPIMGGGRFQLQTEDQESEPLELEPFLALEPPMSATDYGFCLDHDEGLSELFDFEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00783217; iTF_01569057; iTF_00782434; iTF_00780833; iTF_00779312; iTF_00781617; iTF_00775058; iTF_00777235; iTF_00780059; iTF_01181698; iTF_01438690; iTF_01221285; iTF_01079687; iTF_01173065; iTF_00185930; iTF_00185101; iTF_00326875; iTF_00345610; iTF_01197514; iTF_00823717; iTF_00908604; iTF_00156992; iTF_00947693; iTF_00457806; iTF_00457039; iTF_00277168; iTF_00722832; iTF_01360400; iTF_01166386; iTF_01487506; iTF_00383411; iTF_00621812; iTF_01082229; iTF_00795491; iTF_01178197; iTF_00744399; iTF_01359509; iTF_00673286; iTF_00287853; iTF_01437760; iTF_01501878; iTF_00621015; iTF_00888983; iTF_01285336; iTF_00236441; iTF_00235665; iTF_00449913; iTF_00212219; iTF_00213210; iTF_00247835; iTF_00441275; iTF_00171549; iTF_01171256; iTF_01075165; iTF_01564351; iTF_00246976; iTF_00276064;
- 90% Identity
- iTF_01285336;
- 80% Identity
- -