Hzea002167.1
Basic Information
- Insect
- Helicoverpa zea
- Gene Symbol
- -
- Assembly
- GCA_002150865.1
- Location
- KZ118369.1:52061-53896[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-11 4.5e-08 32.7 0.0 3 38 16 51 14 54 0.94
Sequence Information
- Coding Sequence
- ATGTCAGCATCTCAAAAATACAAGAAGAGAAAAAGGTGGGACATGGAGGAAATGAACGCTGCTATTGTCGCTGTTAGAGAAAAGAGAATGGGATATTTAAAGGCAGCTAAACAGTTTAACGTTCCCAGGTCAACACTTTTTCGATTTGTAAATGATAAAGACTCTCCGATTGaatcaataacaaataaagttattgGTAGAAAGCCACTTTTTGGTCAAGATATTGAAAACCTGTTGGTGGAGTACGTATTAACTATGGAGAATAAGTTTAATGGGCTGACTAGAATGGATTTGCGCCGATTGGCATATCAACtcgctttaaaaaataatattaaaaaccctTTTAGGGGTGGCTTTGCTGGGAGATACTGGCTAGAAGGGTTTTTAAAACGACATCAGGAAATTTTGTCCATTAGGCAGCCAACCGGAACTTCTCAAGCACGAGCTAATGGATTTACAAAAGAAAGAATGGACGAATTTTACGACAATCTTGAAAAAGTCCAAGATGATAAGTCATTCCCTGCTACACGCATATTTAACGTTGATGGGAGTGGTCTTTCCGTAGTCCAAagtaaaataccaaaaattatAGCTCGAAAAGGCAAGAAACAAATTGGGGCAATGACGTCAGCCGAAAGAGGGTCCTTAATAACTATTGTAATTTGTATGAGCCCTGCAGGAATATTTGTTCCTCCCATGATAATATTCCCGCGTAAAAATATGTCTGATGCTTTAATGAGAGGAGCTCCAGTTGGTTCTATAGGAAAAGCACATCCATCGGGGTGGATACAAACCAACTTATTTACGCAATGGTTTCAACACTTCTTAGATTACGTGAAACCTACAGTGGCATCCCCAGTACTCTTGATTCTCGATGGACATTACAGTCATACCAAGAACATAGAATTGATAGATCTAGCAAGACAACATTATGTGACGATCCTGTCACTACCACCTCATTGTACGCATAAAGTTCAACCGCTAGACCGCACTTTCATGGGACCCTTAAAATGCTACTATAGTGAAGAAGTTCGTGTGTTTCTcagaaaaactaataaaccCATAACACCATATGATATTGTTGAGCTATTCGGAAAAGCCTACATCAAGTGCCAAACGACAGAAATTGCCTCTAATGGTTTCAGAGTTGGCGGCATATATCCATTTAATCGAAATATATTTACTCAAGCTGATTACATGGCCGCTGCTGCAGATTTTCAAGAGGAACAAAACTGTCAAACTATTTCAACGACGATCGCCTCCCCCACGGTTGCCTCTTTGCCATTGGAGAATTTTGATGACACACAGCCAGGACCGTCAGGTAGTAGAACAGAAATGCACTCCCTTGTTACTCCCTCTCATATTTCTCCCGTgcccaacaaaataaaaaagaatactatAAATAGAGACCGTAAGCCAGCAAGATCGGCAATAATCTCAAGTTCTCCTTATAAAAAAGACCTTGAAAATGCACAGTTAAAAAAGTCTGATAAAGAAAACAGattacataaagaaaataataagggaaaaagcaagaaaaaaataacaaaaaagacaaagaaaaaaaatgtgacagaCAGTGACTCATCAGATCCCGATCCTGGGGTTATATCTGGAAATAACACAGACTCTTCCGACGGTGCAGCGACAAGAGATGAGACTGCAGTCCCTACTGACGAAGATGCCGAATGTTTTTACTGTAACGGAAAATATAGCGAGGATAAAAGGGGTGAAGAATGGCTACAGTGCTTAATGTGCGAATTATGGGTTCACGGTGCTTGTGGTGATTATGAATCTGGTGTGTATATTTGTGATTACTGCAAGAATAGTAACTAA
- Protein Sequence
- MSASQKYKKRKRWDMEEMNAAIVAVREKRMGYLKAAKQFNVPRSTLFRFVNDKDSPIESITNKVIGRKPLFGQDIENLLVEYVLTMENKFNGLTRMDLRRLAYQLALKNNIKNPFRGGFAGRYWLEGFLKRHQEILSIRQPTGTSQARANGFTKERMDEFYDNLEKVQDDKSFPATRIFNVDGSGLSVVQSKIPKIIARKGKKQIGAMTSAERGSLITIVICMSPAGIFVPPMIIFPRKNMSDALMRGAPVGSIGKAHPSGWIQTNLFTQWFQHFLDYVKPTVASPVLLILDGHYSHTKNIELIDLARQHYVTILSLPPHCTHKVQPLDRTFMGPLKCYYSEEVRVFLRKTNKPITPYDIVELFGKAYIKCQTTEIASNGFRVGGIYPFNRNIFTQADYMAAAADFQEEQNCQTISTTIASPTVASLPLENFDDTQPGPSGSRTEMHSLVTPSHISPVPNKIKKNTINRDRKPARSAIISSSPYKKDLENAQLKKSDKENRLHKENNKGKSKKKITKKTKKKNVTDSDSSDPDPGVISGNNTDSSDGAATRDETAVPTDEDAECFYCNGKYSEDKRGEEWLQCLMCELWVHGACGDYESGVYICDYCKNSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932386; iTF_01221447; iTF_01221448; iTF_00924538; iTF_00924539; iTF_01020155; iTF_01020156; iTF_01020157; iTF_00794321; iTF_01075354; iTF_01075366; iTF_01075355; iTF_01152956; iTF_00667293; iTF_01534722; iTF_00071315; iTF_00710944; iTF_00785138; iTF_01084182; iTF_00121337; iTF_00121352; iTF_00124169;
- 90% Identity
- iTF_00785138; iTF_00121352; iTF_00124169; iTF_00121337;
- 80% Identity
- -