Hzea014361.1
Basic Information
- Insect
- Helicoverpa zea
- Gene Symbol
- -
- Assembly
- GCA_002150865.1
- Location
- KZ116310.1:14020-15987[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.6e-13 5.8e-10 38.8 0.0 5 38 19 52 18 57 0.89
Sequence Information
- Coding Sequence
- ATGGTACGttcatacaagaaaaaaactaaaagaggAGAGTGGTCAACAATTTCTATGAAAACAGCTATAGATAAAGTATTAAGTAAAGAAATGGGCTACAGAAAAGCCGCTTCTGAATACGGAGTGCCTCAGACTACTTTGGAGCGATATGTTAAGAAAATGAAGGAAGATGGTGAAGTTACAATTGGTGTACCTTTGGGCCctaaaaaacctatttttacaacaaaagaAGAAGACGAGATTGTGGCATATCTAAAACATATGGAAGAACGTCTTTTTGGGCTGACAACTCTCGATCTGAGACGTCTAGCATATCAACTGGCTGTGAGAAATGGTAAGGCGCACAATTTTAATACTGACAAGCAGATGGCAGGGGTTGATTGGCTCAAAGGTTTCTTAAGGCGTCATCCAGATTTATCCATTCGTAAGCCCGAAGCTACTTCAGCAGCTAGAGCAATGGGGTTTAATAAAGTGGCCGTTAGTAAATTCTACCAGTTGCTCGGAGAGATTTATGACAAGCATAAATTAACTCctgacaaaatatataattgtgaCGAAACTGGTATCTCCGTTGTATCTAAAACCAAGAGCAAAATATTGGCCATGAAAGGACGAAAACAAGTAGGCTCGTTATCATCTGCAGATCGCGGCCAGACTATTACAgtagaaatatgttttaacgCTGCTGGAACCTACATGCCTCCACTGATGATTTTTCCGAGACAACGAATGAAACCAGAATTGTTAGATCACGCCCCACCAGGTACTGAAGGTGTTTGCAATGCTCGAGGCTGGATAACTAccgaaatatttttgacttgGTTCAATAAGTTTATCAGATTCTCCGGAGCTACTCCTACTAATCATGTGTTGCTGCTTCTAGATGGGCATGTAAGTCACACTCAAAATTTGGAAGTAATTGATCTGGCACGTAAAAATGGAGTTATTATACTTTGCTTTCCACCTCACTGCACACATAAAATGCAGCCAGCAGATGTTGCATTTATGAGGCCACTCAGTACATATTATGACCATGCTGTTTCGGCCTGGTTGAGATCACACCCAGGGCGTGTGGTAACTGTATTTCAGATAAGTGAAATATTTGGAAATGCATATATTCAGGCAGCTACAATGTCGACAGCAATCAACGCATTCAGAAAGTGTGGCATATGGCcgtttaatgaaaataattttacggaTGCCGATTTCATATCTGCTGCAACTACtgatatacaaaatattgaaaactcgTCGAGTGTAGAGCAACACAGAGTTACAGAAGCCGAAGGGCCTCAATATGAGGTAGTTCCATCTGTGCCTTCAACCACAGTAGTCACGACTGTATCTTCAACGACCACAACATCCCATCCTGGAGCAGTTACAACAAGACCTGAACTTACAACAGAATCATGCACTTCAGTTAGAATAGATTTTATCACCGAATGTACAGAGCAAGTCACACCTGATGTGACTAAAAAATCTGCTCCCGAACCTGAACCTGGATGTTCTTTTGCTTCTAAATCTCCCATCCGTGCGGTATGCCGCGATCTTACATCTAGCTTTGAAAATGCATCCCCTAGTGATATTTTGCCAATCCCTTTGGTCCAACAAACTGAAAAGAGGAAGCAATACCGGAGAGGAAAAACAGCTGTCATTACTTCAACTCCTTATAAAAATGAGCTGgagaatttgaaaaaactgaGGAAAGTATCCAATCCTAATGATCCTCGGCTCAAAAAAAATGCtaagaagaaacaaaagactacaGTTGCAGCCAAGACGAAaaatgacgatgatgaagaTACAATTTGTCTCTATTGTAATGATGAAAATCATAGTTTTCTGAAATCATCCGAAGGTTGGGTAGGCTGCCAGCTTTGTGGACGTTGGGCTCACAATGGTTGTGCTGGTGTGGATGATGAAAACACCGAAGAAattcatatttgtatttattgtgataataattaG
- Protein Sequence
- MVRSYKKKTKRGEWSTISMKTAIDKVLSKEMGYRKAASEYGVPQTTLERYVKKMKEDGEVTIGVPLGPKKPIFTTKEEDEIVAYLKHMEERLFGLTTLDLRRLAYQLAVRNGKAHNFNTDKQMAGVDWLKGFLRRHPDLSIRKPEATSAARAMGFNKVAVSKFYQLLGEIYDKHKLTPDKIYNCDETGISVVSKTKSKILAMKGRKQVGSLSSADRGQTITVEICFNAAGTYMPPLMIFPRQRMKPELLDHAPPGTEGVCNARGWITTEIFLTWFNKFIRFSGATPTNHVLLLLDGHVSHTQNLEVIDLARKNGVIILCFPPHCTHKMQPADVAFMRPLSTYYDHAVSAWLRSHPGRVVTVFQISEIFGNAYIQAATMSTAINAFRKCGIWPFNENNFTDADFISAATTDIQNIENSSSVEQHRVTEAEGPQYEVVPSVPSTTVVTTVSSTTTTSHPGAVTTRPELTTESCTSVRIDFITECTEQVTPDVTKKSAPEPEPGCSFASKSPIRAVCRDLTSSFENASPSDILPIPLVQQTEKRKQYRRGKTAVITSTPYKNELENLKKLRKVSNPNDPRLKKNAKKKQKTTVAAKTKNDDDEDTICLYCNDENHSFLKSSEGWVGCQLCGRWAHNGCAGVDDENTEEIHICIYCDNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00822852;
- 90% Identity
- iTF_00822852;
- 80% Identity
- -