Hzea017849.1
Basic Information
- Insect
- Helicoverpa zea
- Gene Symbol
- jarid2b
- Assembly
- GCA_002150865.1
- Location
- KZ118116.1:234965-250330[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.65 1.5e+03 -0.3 0.0 40 67 342 369 340 380 0.77 2 2 2.2e-17 5.3e-14 52.5 0.1 13 89 717 790 707 790 0.87
Sequence Information
- Coding Sequence
- ATGAGACCGGCACGTTCGCGTCGGGTACAGGCGCAGCGAAAATTTGCGCAGGGGGCTTATATGCCACCTGCTGCGGTCGCCGTTGTCACAACCGACACTCGGCAAAATACAGTCCAGGATCCCAACGTGACCATAAATCACGTATCCGCGACAAGCTTGCTAGACACCGTAGCTATGGAAGGTCTCCACACACATTTACAACCTGTAGTGCTGCTGGAGAGGCTTCGTGGTAGGAAACCGAGCAGCGACGCGCCGCCGAGTCCCGCGCCCCCTAGCCCCGCGCCCCCTATTTGTGCACCGCCCCCTCCTGCTTCTCCTGTTCTCCCAGCGCTACCGCGctccaaattaaatataatggcCAGAATAAAACACACGATGTCACTGCGCACTCGACGTAAACCGACGAACAAGTATAGAGACTCCGAAAAGTTTGTCGTAGCTCACAACTCTGGGAAAAGACGTACAACGAAACGGAGATTGACGAATCCAACCAGTAAGAGTTCGCATTCAAAAAAAAGTCGTGTGGAGCCTTCAGAATTTTCCTTGGAAGACAATCAGCCGTTGACAATATATTTTGGCAAGTGCAATAGCAAGCCAAAGGCAGAGGCGCCGGTGCAGGAATCGGCGCAGCAGCCGGCTCAGGAGCAGATGCTGCAGGCTGCTCAGGAGCCGATGCAGGCGCCGATGCTGGAGGCTGCTCAGGAGCCGGCACCGAACCCGATGGAGGAGTCGATGCAGCAGCCGGTGCAGGATCCGGAGCAGGATCTGATGCAGGAGGCGCTGCAGCAGCCGGTTCATGAGCTGGTGCAGCAGCCGGTTGAGGAGCCGGTGCAGCAACTGGCTCTGGAACCGGTGCAGCAACTGGCTCCAGAACCGGTGCAGCAGCCGGCTCAGGAACTGGTGCAGCAGCCGGCTCAGGAACTGGTGCAGCAGCCGGCACAGGCTCCGGTGTGGGCACTCGATGATATCAATCGCCAGAACAGAAGTGATAACGTCCTGGAAGGAGCTGTCCCGGAGGGAGGAGTTCAGTCGGAGGGAGGAGTGCCGGTGCCGTGTATTGCGCAGAAGTGGAGATCTGTGCAGGACGTCATCAATGCAACTAAGGAAGAGCTGGACTCTCGCTGCCAACAATGCGCACCCTGTGTACGCATTGACAAATTGATGAAATTGTCGGAACTGCTCAATACTCAGCTTGACTTGCCGAACGGCAGTCATACTAATGCTGACGACGACAAAAATGACGAGGCCATGGTATCACCGGACGCAGACCAAGGCCATCTCTATCTGGACCTGCTCCCGAAACACCCCAATGTCGTGATGAAGATCAACACTCACATTGTACATGGGAAAGAACTAATGTCTGCATGTTTGATACCCAGAAATGAATCTAAGACTAACAAGCAAGAGTTTGTGCTGCAAGAACAAGAACATCTCCTTGATCAATTAATCGAGACTCTAAGTCTCAACAACAAAACCGATAACCGAGTAACCCGCAGAGCGAGCGTTTCTTCCATTGTTAGCATAACCGACGACAGTGATGATGCCGAATCTCTAAGCAGAGAGACCGAAGACCAACTGACAGTGCAGAGGAAGAAGAAGCGTCAACAGAGGCCGGCTAAGAAACGCAATAACAATTTGCGTGCGCGCGTTCAACAACAGAAACTCAAAGATTTGTTGCGCATTGAGGCTAAAGGCACTTCTCTCGCAAGGGGAAAAACCCGCGTGCAGGAACAGGTTGATGAGTCCGACTCCGACTCCGACGACGACGAAGCTACGTTAGAAGAGCTTACGCCTGAAGTGCCAGAAAGCGTGACGCCTCAAAAGGAGGGTTCGGAGGTGGGAACGAGCTCCGACGCAAACGCCACTGGAACCGGCGCCTCCCCACAGACTCCTGAAGGTGGCGGCATCGTGGACGCGCCCATATTCCGCCCTACCAAAGAGGAATTTAATgaccctattgaatattttgaaaaaatttgGCCAGAAGCGGCTAAATTTGGTATTTGTAAAGTAGTACCTCCTGAAGGGTGGAACCCTACGTGTCGAATCACTGATGATCTGAGATTTGATGTATCAAATCAATATATTCCGCGGTTATTAAATCGCTGGGGACCGGCTGCGAGGGAACTTAGTGCTATTAAGCTTTGCCTTTACCAACAGAGAATCAAATTGGTGCGTCCGGCTGTGCTGGATGGTGTGGAAGTGAATTTGCCCAAGCTGTACCACACTATCCAAAAACATGGTGGCCTTGAGAACGTTATGAATAAGAAGCGATGGACTAAAGTCTCAGATGAAATGAGATTACCCAAGCATCCAATCCTTGACAAGAAACTAGACAATATGTATGTGAAGTATCTCCTGCCTTACGACACTCTAACAAGTCAGGAACGACAAGAAATATTAGGCAAGGTTGAAAAGGGGTGGAATAAAAAGAATCAAAAGCTTTTGGAGCGCGCTATGAACCCACTGCATCGCCAGAAGCGTATGCTCGGCTTGTCTGACAGTTCCGACGATGATTCTGAGGACGAGGAAACAGCCCTGGCTATCAGCGAAGCTGAAGACTGCATCATGAAAGGAGCTGTCATGAACCCTCCCAGATTTAAaaggGTCGCTAGACacatgtatgaaaatattttgggtCCGGGCGCGGAAGCAAATGGGCCGCCGTCTTTAGAAGAAATAGAGGAAAAATACTGGCGTTACGTGACGCAGGGCACTGAGCACCTTTGTGTTTATACCGCGGCTATCGACACGGGTGAACAGGGACACGGCTTCACCAAGAACAAGAACGAGCCTTTTGGCAAACACCCCTGGAATTTAAAGATGATAAGCCAAAACCCCAAGAACATTCTTCGCTATCTGGGCCCTGTACTGGGTGTCACTGTACCCACCTTGCACTTGAGTATGCTCTTTTCAACCAGCTGCTGGCACAAGGACCCTCACACTCTACCTTGGCAGGAGTACCAACACAGTGGACCCACTAGAATCTGGTATGGAATTGCAAACGAGCAGACAGATCGGTTCAGGATGGCAGTAGAGACTGTGTGCCCAACCTATGCCCAGAACAAGGGTCTTTGGCTATCTACAGACATCACAATGATCCCTCCCAATGTGCTGCGCGAACAAAACGTATGTTTGTCGCGAGTCACTCAGGCAGCTGGAGAGTTTATACTTGCCTTCCCGAGGGCGTACACTTGTTGCATCAGTACGGGGTATACTGAGTCTGAGAGCGTGTACTTCGCTCCTGTTAGCTGGCTGGCTAATATTCACGAGGCTTTCCAGGAAGCGCGCGAGAGTTGTGAACCAACGATGTTCTCTATGGAGCAGCTACTGTACCAGATCGGCAAGGACCCGCGCACCGAAAGGGATGTATTGGCCATACTACAACCCATTTATGACAAGATGCTCCGCGATGAAGTCACCAACAGGCAGATGCTGCAGGAACGAGGAATTGCATTCGTCAACCAGAACTCGACGAGTAGCAAGCGCAAGCGATCCGGCCTCGCCTTCAACTCACGCGAGCACGACGAGTGCGATTACTGCCGCGCCACACTCTTCCTCTCCAAGgtgaAGGGGCTGACAGGTAGGAATGAGTCGCTGTGCCTTGAGCACGCCTTAAAGCTGATGGACGTCGGCCGCTACAGCCTCAGAGACATCAGTCAGTCCGAAGTCCACGTGCTCGTCACTGTAAAGGAACTCAACACGGTCGGCGATGACATCAAACGCCGCCTCCAGAACACCAAAAGGCCGTAA
- Protein Sequence
- MRPARSRRVQAQRKFAQGAYMPPAAVAVVTTDTRQNTVQDPNVTINHVSATSLLDTVAMEGLHTHLQPVVLLERLRGRKPSSDAPPSPAPPSPAPPICAPPPPASPVLPALPRSKLNIMARIKHTMSLRTRRKPTNKYRDSEKFVVAHNSGKRRTTKRRLTNPTSKSSHSKKSRVEPSEFSLEDNQPLTIYFGKCNSKPKAEAPVQESAQQPAQEQMLQAAQEPMQAPMLEAAQEPAPNPMEESMQQPVQDPEQDLMQEALQQPVHELVQQPVEEPVQQLALEPVQQLAPEPVQQPAQELVQQPAQELVQQPAQAPVWALDDINRQNRSDNVLEGAVPEGGVQSEGGVPVPCIAQKWRSVQDVINATKEELDSRCQQCAPCVRIDKLMKLSELLNTQLDLPNGSHTNADDDKNDEAMVSPDADQGHLYLDLLPKHPNVVMKINTHIVHGKELMSACLIPRNESKTNKQEFVLQEQEHLLDQLIETLSLNNKTDNRVTRRASVSSIVSITDDSDDAESLSRETEDQLTVQRKKKRQQRPAKKRNNNLRARVQQQKLKDLLRIEAKGTSLARGKTRVQEQVDESDSDSDDDEATLEELTPEVPESVTPQKEGSEVGTSSDANATGTGASPQTPEGGGIVDAPIFRPTKEEFNDPIEYFEKIWPEAAKFGICKVVPPEGWNPTCRITDDLRFDVSNQYIPRLLNRWGPAARELSAIKLCLYQQRIKLVRPAVLDGVEVNLPKLYHTIQKHGGLENVMNKKRWTKVSDEMRLPKHPILDKKLDNMYVKYLLPYDTLTSQERQEILGKVEKGWNKKNQKLLERAMNPLHRQKRMLGLSDSSDDDSEDEETALAISEAEDCIMKGAVMNPPRFKRVARHMYENILGPGAEANGPPSLEEIEEKYWRYVTQGTEHLCVYTAAIDTGEQGHGFTKNKNEPFGKHPWNLKMISQNPKNILRYLGPVLGVTVPTLHLSMLFSTSCWHKDPHTLPWQEYQHSGPTRIWYGIANEQTDRFRMAVETVCPTYAQNKGLWLSTDITMIPPNVLREQNVCLSRVTQAAGEFILAFPRAYTCCISTGYTESESVYFAPVSWLANIHEAFQEARESCEPTMFSMEQLLYQIGKDPRTERDVLAILQPIYDKMLRDEVTNRQMLQERGIAFVNQNSTSSKRKRSGLAFNSREHDECDYCRATLFLSKVKGLTGRNESLCLEHALKLMDVGRYSLRDISQSEVHVLVTVKELNTVGDDIKRRLQNTKRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00783210;
- 90% Identity
- -
- 80% Identity
- -