Hass025368.1
Basic Information
- Insect
- Helicoverpa assulta
- Gene Symbol
- jarid2b
- Assembly
- GCA_029618815.1
- Location
- CAWLCW010000029.1:2064592-2073462[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 4.3e+03 -1.0 0.0 40 67 433 460 430 471 0.77 2 2 1.4e-16 4.7e-13 50.2 0.1 15 89 813 884 801 884 0.85
Sequence Information
- Coding Sequence
- ATGGCGCGCCATCATAAAGATAAGGCACGTTCGCGTCGGGTACAGGCGCAGCGAAAATTTGCGCAGGGGGCTTATATGCCACCTGCTGCGGTCGCCGTTGTCACAACCGACACTCGGCAAAATACAGTTCAGGATCCCAACGTGACCATAAATCACGTATCCGCGACAAGCTTGCTAGACACCGTAGCTATGGAAGGTCTCCATACACATTTACAACCTGTAGTGCTGTTGGAGAGGCTTCGTGGTAGAAAACCGAGCAGCGACGCGCCGCCGAGCCTCGCGCCCCCTATTTGCGCACCGCCCACCCCTGCTCCTCCTGTTCTCCCCGCGCTACCGCGCTCCAAATCCAATATAGCGAATACTGATCAAATAATTAAACCCAGAATGCCCAGAATAAAACGTTTTCACACCATGTCACTGCGCACACGACGTAAACCGACGAACAAGTATGGAGACTCCGAAAAGTTTGCTCACAATTACTCTGCAAAAAGATATACAATGAAACGGAGATTGGAGGATCAAACCAGTAAGAGTTTGCATCCTAAAAAGAATCGTCTAGAGCCTTCAGAATTTTCCATGGAAGACAATCAACCcttaacaatatattttgcCAAGTGCAGTAGCAAGCCAAAGGCACAGGCGCCGGTGCAGGACTTGGCGCAGAAGCCGGCTCAGGACCCGAAGCAGGTGCCGGCTCAGGACCCGAAACAGGAGCCGGCGCAGCAGTCTGCTCAGTCGATGCCGGAGCCGGTGCAGGAGCAGATGCTGCACGCAGCTCAGGAGCCGATGCAGGGGCCGGTGCAGGAGCCGATGCTGGAGGCTGCTCAGGAGCCGGCACAGGACCCGATGCAGGAGTCGATGCAGCGGCCGGCTCAGGAGCTGGCGCAGCAGTTGATGCAGGAGCCGATGCGCGATTTGATGCAGGAGCCGATGCAGGAGCCGGCGCAGGATCTCATGCAGGAGGCGCTGCAGCAGCCAGTTCAGGAGCTAGTGCAGCAGCCGGCTCAGGAACCGGTGCAGCAGCCGGCACAGGCTCCGGTGCGAGCGCTGCCACAGTCACCAGTGAAAACGTCGCTGGCCGAGTCCATTGTCTCGCCAGCAAGGCCCATCCAGATGGTGACTCCTCGTCACACCTCGCCAGAACCTGTTGCTGGACCTAGCGGGATGCAGAACTCAGGATTGCCACAGTTTAGCTCACAGCTGCAAGATAAAATACAGAGTTGGATGTTGAGCGCCGCACTTGATGATATCAATCGCCAGAACAGAAGTGATAATGTCCTGGAAGGAGCTGTCCCGGTTCAGTCGGAGGGCGGAGTGCCGGTGCCGTGTATTGCGCAGAAGTGGAGCTCCGTGCAGGACGTCATCAATGCAACTAAGGAAGAGCTGGACTCTCGCTGCCAACAATGCCGACCCTGTGTACGCATTAACAAATTGATGAAATTATCGGCACTCCTCAATACTCAGGTTGACTTGCCGAACGGCAGTCATACTAATGCTAACGACGATACCAAAAATGACGAGGCCATGGTATCACCGGACGCAGACCAAGGCCATCTCTATCTGGACCTGCTCCCGAAACACCCCAATGTCGTGATGAAGCTCAACACTCATATTGTGCATGGAAAAGAACTGATGTCTGCTTGTTTGGTACCCAGAAATGAATCTAAGAAGAACAAGCAAGAGTTTGTGCTGCAAGAACAAGAACATCTCCTAGATCAATTAATCGAGACTCTAACGATTAGTCTCAACAACAAAACCGATAACCGAGTAACCCGCAGAGCAAGCGTTTCTTCCATCGTTAGCATAACCGATGACAGTGATGATGCCGTATCTCTAAGCAGAGAGAACGAGGACCAACTGAAAGTACAGAGGAAGAAGAAGCGTCAACAGAGGCCGGCTAAGAAACGCAATAACAACTTGCGTGCGCGCGTGCAACAACAGAAACTCAAGGATTTGTTGCGCATTGAGGCTAAAGGCACTTCTCTCGCAAGGGGAAAGAACCGCATTCAGGAACAGGTTGATGACTCCGACTCCGACGATGACGAAGCTACTTTAGAAGGGCTTACGCCTGAAGTGCCAGAAAGCGTGATGCCTGAAAAGGAGAAGGAGGGTTTGGAGGTGGGAACGAGCTCCGACGCCAACGCGACTGGAACCGGCACTTGCCCACAGACTCCTGAAGGTGGCGGCATCGTGGACGCGCCCATATTCCGCCCTACCAAAGAGGAATTTAATgaccctattgaatattttgaaaaaatttgGCCAGAAGCGGCTAAATTTGGTATTTGTAAAGTAGTCCCTCCTGAAGGGTGGAACCCTACGTGTCGAATCACTGATGACCTGAGATTTGATGTGTCAAATCAATATATTCCGCGGTTATTAAATCGCTGGGGACCGGCTGCGAGGGAACTTAGTGCTATTAAGCTTTGCCTTTACCAACAGAGAATCAAATCTGTGCGTCCGGCTGTGCTGGATGGTGTGGAAGTGAATTTGCCCAAGCTGTACCACACTATTCAAAAACACGGTGGCCTTGAGAACGTCATGAATAAGAAGCGATGGATTAAAGTCTCAGATGAAATGAGATTACCCAAGCATCCAATCCTTGACAAGAAACTAGACAATATGTATGTGAAGTACCTCCTGCCATACGACACTCTTACAAGTCAGGAACGACAAGAAATAATGGGTAAGGTTGAAAGGGGGTGGAACAAAAAGAATCAAAAGCTTTTGGAGCGCGCGATGAACCCACTGCATCGCCAGAAGCGTATGCTCGGCTTGTCTGACAGTTCCGACGATGATTCTGAGGACGAGGAAACAGCCCTGGCTATCAGCGAAGCTGAAGACTGCATCATGAAAGGAGCTGTCATGAACCCTCCCAGATTTAAAaggGTCGCTAGACACATGTATGAAAATATCTTAGGTCTGGGCGCGGAAGCAAATGGGCCGCCGTCTTTAGAAGAAATAGAGGAAAAATACTGGCGTTACGTGACGCAGGGCACTGAGCACCTTTGTGTTTATACCGCGGCTATCGACACGGGTGAACAGGGACACGGCTTTACCAAGAATAAGAACGAGCCTTTTGGCAAACACCCCTGGAATTTAAagATGATAAGCCAAAACCCCAAGAACATTCTTCGCTATCTGGGCCCAGTACTGGGTGTCACTGTACCCACATTGCACTTGAGTATGCTCTTCTCAACCAGTTGCTGGCACAAGGACCCTCACACTCTACCTTGGCAGGAGTACCAGCACAGTGGACCCACTAGAATCTGGTACGGAATCGCAAACGAGCAAACAGATCGGTTCAGGATGGCAGTAGAGACTGTGTGCCCAACCTATGCTCAGAACAAGGGTCTATGGCTATCTACAGACATCACAATGATCCCTCCCAATGTGCTGCGCGAACAAAACGTATGTTTGTCGCGAGTCACTCAGGCAGCCGGAGAGTTTATAGTTGCCTTCCCAAGGGCGTACACTTGTTGCATCAGTACGGGCTATACTGAGTCTGAGAGTGTGTACTTCGCTCCTGTTAGCTGGCTGGCTAATATTCACGAGGCTTTCCAGGAAGCTCGCGAGAGTTGTGAACCAACGATGTTCTCTATGGAGCAGCTACTGTACCAGATCGGTAAAGACCCGCGCACCGAGAGGGACGTACTGGCCATACTACAACCCATCTATGACAAGATGCTCCGCGATGAAGTCACCAACAGGCAAATGCTGCAGGAACGAGGAATTGCTTTCGTCAATCagAACTCGACGGGcagcaagcgcaagcgatccgGCCTCGCGTTCAACTCACGCGAGCACGACGAGTGCGACTACTGCCGCGCCACACTCTTCCTCTCCAAGgtgAAGGGGCTGACAGGTAGGAATGTGTCGCTGTGCCTTGAGCACGCCTTAAAGCTGATGGACGTCGGCCGCTACAGCCTCAGAGACATCAGTCAGTCTGAAGTCCACGTGCTCGTCACTGTGAAGGAACTCAACACAGTCGGCGATGACATTAAGCGCCGCCTCCAGAACACCAAAAGGCTGTAA
- Protein Sequence
- MARHHKDKARSRRVQAQRKFAQGAYMPPAAVAVVTTDTRQNTVQDPNVTINHVSATSLLDTVAMEGLHTHLQPVVLLERLRGRKPSSDAPPSLAPPICAPPTPAPPVLPALPRSKSNIANTDQIIKPRMPRIKRFHTMSLRTRRKPTNKYGDSEKFAHNYSAKRYTMKRRLEDQTSKSLHPKKNRLEPSEFSMEDNQPLTIYFAKCSSKPKAQAPVQDLAQKPAQDPKQVPAQDPKQEPAQQSAQSMPEPVQEQMLHAAQEPMQGPVQEPMLEAAQEPAQDPMQESMQRPAQELAQQLMQEPMRDLMQEPMQEPAQDLMQEALQQPVQELVQQPAQEPVQQPAQAPVRALPQSPVKTSLAESIVSPARPIQMVTPRHTSPEPVAGPSGMQNSGLPQFSSQLQDKIQSWMLSAALDDINRQNRSDNVLEGAVPVQSEGGVPVPCIAQKWSSVQDVINATKEELDSRCQQCRPCVRINKLMKLSALLNTQVDLPNGSHTNANDDTKNDEAMVSPDADQGHLYLDLLPKHPNVVMKLNTHIVHGKELMSACLVPRNESKKNKQEFVLQEQEHLLDQLIETLTISLNNKTDNRVTRRASVSSIVSITDDSDDAVSLSRENEDQLKVQRKKKRQQRPAKKRNNNLRARVQQQKLKDLLRIEAKGTSLARGKNRIQEQVDDSDSDDDEATLEGLTPEVPESVMPEKEKEGLEVGTSSDANATGTGTCPQTPEGGGIVDAPIFRPTKEEFNDPIEYFEKIWPEAAKFGICKVVPPEGWNPTCRITDDLRFDVSNQYIPRLLNRWGPAARELSAIKLCLYQQRIKSVRPAVLDGVEVNLPKLYHTIQKHGGLENVMNKKRWIKVSDEMRLPKHPILDKKLDNMYVKYLLPYDTLTSQERQEIMGKVERGWNKKNQKLLERAMNPLHRQKRMLGLSDSSDDDSEDEETALAISEAEDCIMKGAVMNPPRFKRVARHMYENILGLGAEANGPPSLEEIEEKYWRYVTQGTEHLCVYTAAIDTGEQGHGFTKNKNEPFGKHPWNLKMISQNPKNILRYLGPVLGVTVPTLHLSMLFSTSCWHKDPHTLPWQEYQHSGPTRIWYGIANEQTDRFRMAVETVCPTYAQNKGLWLSTDITMIPPNVLREQNVCLSRVTQAAGEFIVAFPRAYTCCISTGYTESESVYFAPVSWLANIHEAFQEARESCEPTMFSMEQLLYQIGKDPRTERDVLAILQPIYDKMLRDEVTNRQMLQERGIAFVNQNSTGSKRKRSGLAFNSREHDECDYCRATLFLSKVKGLTGRNVSLCLEHALKLMDVGRYSLRDISQSEVHVLVTVKELNTVGDDIKRRLQNTKRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00784180;
- 90% Identity
- -
- 80% Identity
- -