Hass003829.1
Basic Information
- Insect
- Helicoverpa assulta
- Gene Symbol
- RHOBTB1
- Assembly
- GCA_029618815.1
- Location
- CAWLCW010000002.1:9260057-9266876[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-07 6.2e-05 24.0 0.2 4 44 257 296 254 317 0.83 2 3 0.00011 0.046 14.7 0.2 47 109 394 463 385 464 0.76 3 3 2.7e-06 0.0012 19.9 0.1 6 53 488 533 484 543 0.84
Sequence Information
- Coding Sequence
- ATGGACAACGAGCAGCCCCACCAGGAGCTGGTAAAATGTGTTGTTGTCGGAGACACAGCGGTCGGCAAGACTCGCCTGATATGTGCTCGGGCTTGCAACAAACACGTGTCACTCTCGCAGCTGATGACAACACATGTGCCGACTGTGTGGGCTATTGATCAGTACCGGATTTATAAGGATGTGCTAGAAAGATCTTGGGAAGTTGTAGACGGTGTGAATGTGTCTCTTCGTCTTTGGGACACATTTGGTGATCATGAAAAGGATAGGAGATTTGCCTACGGAAGGTCTGATGTGGTTCTTTTATGTTTTTCCATAACAAATCCTATATCTTTGAGGAATTGTGGAGCTATGTGGTATCCTGAAATTAGACGGTTTTGTCCAAATACACCAATATTATTAGTGGGATGTAAGAATGATCTGCGCTACATGTATAGAGATGAGACCTATCTAAATTACTGCAAGGACCGCAGCCCTTTCATCAGGGCTCCAAGAAAAAGTGACCTAGTAATGCCAGACCAAGGCCGGGCCCTAGCTCATGAGTTCGGCATATACTACTACGAAACATCAGTGTTCACCTACTATGGAGTTAATGAGGTGTTCGAGAATGCTATCAGAGCTGCCCTCATAGCTAGGAGACAACAGCGGTTCTGGATGACCAACCTTAAGAGGGTTCAACGGCCTTTGTTACAGGCACCATTTAGACCCCCGAGACCAATGGAGCCTGAAGTAGTGGTCGTCAACAGCACTTATCTAGAGAACATGACCACCTTATTGCGACAACAGTATTTCTCAGACATGGTAATAATCTGCGGCGCGAAAGGTTTCCCGGTGCACCGGTTCATGATGGCAGCCGCCTGCGAAGCCTTCCACCGCCTGCTGACCAGCGACTGCGTCAGCCTGTCTGCTGAACTGGCCAGGAGTTCTAGCGAGAGCAGCATGGTAAGCAGCATGGGAGAAGCGACGACGGGCGAGTTCAATGAGGACACCGAGTATTTAATACGACAGGACCAAGCGAAGCAGATGAGAGTATGGGATCAGATAAAGCGGAGGTCATCATGTCAGATCCTGCCTCTGAGTGACAGCTGTAAAAAGCCGCCAGACTTATACCGGGAGGTCAACCACCCGGCTATCAACTCTATCAGAGTTGTTAAGTGCGACAAGATCCAACACGCCACTTCCCAAACTCAAACCATAGTGACGATGAGTAAACTTATTTCTCAAAATGTGATGCAAGAAATTATCAACTTTATCTACACGGGGGCTCTAGACAGCAGCGCTTTCAAACAGCAGTCAGCTGCTATCGGATTATTACTGGAGATCAGACAGGCGGCCGAGTTGCTGGGCTTCCACGAGCTCACCAAGCTCAGTCAGTTCATATTGGATCAACATCTGTTGTTCGACAAGGGGTTTATGCTGCAGTTTCATACGCCTCTGGGCGGTCGTCTCCGCGACATGTACGTGGAGCGAGCACAGTTCGCGGACGTGACGTTTGACCTGGACGACGGCATCCACCtcgcgcaccgcgccgcgctcaTGGCGCGATGTGACCCCATGAAGGCGATGTTCCAGGGACACTTCCGGGAGAGCACTTCTAGAGTGGTGAGTGCTATTTGTTGTGACATGTATGCTTTTTGA
- Protein Sequence
- MDNEQPHQELVKCVVVGDTAVGKTRLICARACNKHVSLSQLMTTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVSLRLWDTFGDHEKDRRFAYGRSDVVLLCFSITNPISLRNCGAMWYPEIRRFCPNTPILLVGCKNDLRYMYRDETYLNYCKDRSPFIRAPRKSDLVMPDQGRALAHEFGIYYYETSVFTYYGVNEVFENAIRAALIARRQQRFWMTNLKRVQRPLLQAPFRPPRPMEPEVVVVNSTYLENMTTLLRQQYFSDMVIICGAKGFPVHRFMMAAACEAFHRLLTSDCVSLSAELARSSSESSMVSSMGEATTGEFNEDTEYLIRQDQAKQMRVWDQIKRRSSCQILPLSDSCKKPPDLYREVNHPAINSIRVVKCDKIQHATSQTQTIVTMSKLISQNVMQEIINFIYTGALDSSAFKQQSAAIGLLLEIRQAAELLGFHELTKLSQFILDQHLLFDKGFMLQFHTPLGGRLRDMYVERAQFADVTFDLDDGIHLAHRAALMARCDPMKAMFQGHFRESTSRVVSAICCDMYAF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01148965;
- 90% Identity
- iTF_01173447; iTF_00403976; iTF_01153163; iTF_01029389; iTF_01280560; iTF_00180631; iTF_00827168;
- 80% Identity
- -