Hsar019850.1
Basic Information
- Insect
- Heliconius sara
- Gene Symbol
- -
- Assembly
- GCA_917862395.2
- Location
- OU860799.1:9080152-9088989[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0036 0.27 12.2 1.0 3 23 209 230 208 230 0.96 2 22 0.035 2.6 9.1 0.6 1 22 605 626 605 626 0.95 3 22 5 3.7e+02 2.3 0.3 1 22 668 689 668 691 0.82 4 22 0.39 29 5.8 0.5 1 14 700 713 700 721 0.82 5 22 0.23 17 6.5 1.1 3 21 771 789 769 792 0.93 6 22 0.036 2.7 9.0 5.3 1 23 798 821 798 821 0.95 7 22 0.24 18 6.5 0.0 1 23 847 870 847 870 0.90 8 22 0.014 1 10.3 3.4 1 23 875 897 875 897 0.97 9 22 0.03 2.2 9.3 0.2 1 23 903 926 903 926 0.95 10 22 0.0017 0.13 13.2 1.3 1 23 938 960 938 960 0.97 11 22 0.0011 0.08 13.8 4.0 1 23 1003 1026 1003 1026 0.96 12 22 0.0038 0.28 12.1 1.7 1 23 1086 1109 1086 1109 0.96 13 22 0.00091 0.067 14.1 2.3 2 23 1132 1154 1131 1154 0.95 14 22 0.065 4.8 8.2 0.1 2 23 1160 1182 1159 1182 0.93 15 22 0.0074 0.55 11.2 0.2 1 21 1226 1246 1226 1247 0.95 16 22 0.00092 0.068 14.1 0.6 1 23 1257 1279 1257 1279 0.93 17 22 6.6e-05 0.0049 17.7 0.3 2 23 1367 1389 1367 1389 0.93 18 22 1.3e-07 9.9e-06 26.1 1.1 3 23 1396 1416 1395 1416 0.98 19 22 0.0022 0.16 12.9 0.5 1 23 1433 1456 1433 1456 0.94 20 22 0.09 6.7 7.8 0.0 1 23 1479 1501 1479 1501 0.97 21 22 0.021 1.5 9.8 0.6 1 23 1507 1530 1507 1530 0.95 22 22 0.00019 0.014 16.2 0.4 1 23 1538 1561 1538 1561 0.96
Sequence Information
- Coding Sequence
- atGAATGTGAATTATGACCGTGTTTGTAGACTGTGCTTGTCATCTCGATGCGAATTACTACCGATATTTCCTACCACCAGTTCGGATGACTCCGAACCTCCTGTCCTCGCCTCGAAAATCAAAGATTGCGTGTCAGTGCAGataagCGAAAATGACGACCTGCCAACCAATGTCTGCAGGAAATGCTTGGACAATGTTAATAACTGGCATATTTTCAAGACAATATGTGAAAGGACACAAAATAGGTTACAGTCTTTCATTAATAAGGACAGCAACCTACTAGAAGAGgtcaaaataaaaaatgaaccaATGTCAGATGAAGCCTATGATGATGGAGTGGTTATTGATGGATCATACCCTGACATTGAGaaTGCTGgaccattaaataaaatacaacctGAAGGTCCACCCATATTGGCTTCATTGGGACTCACACCGAGGAGTGATAAGGGCATGGAAAGCGAAAAAGAAGAGGATTATGAAGAGGAAGATGAACAAGAATTGCTAGAGCCTCGCTCATACACAAATGTACCAAATATGCCTGAAGTGTCGATCACAGTGATGCGCCCAACTGGAGAAACTTTGCATGCACGACAAGGTATACAACAGCTTGCGTCTAAAGACTGTCTAGTCTGTGGAAGATCCTACAGATATTCGCATAACGCAAGAAGACACGAGCTTACTGCTCATGGCTTTGATAGATACACAAATAAGGTCACAAACTTGAAATCTCGAGCTCACATGCAACCTAAGTTTAGACCTAACCCATTCAATCCGAAGGCGCGTCTCATGCCAAACCCAATTAGTCATAAAATGCAGTATCACCCCAAATCCATGCCAAACAAAATGATACCGCATAAAGTTGTCGCACAACCGAAGCCAATACCTATTCGGACCGCAAAGACTCCTCAAAATAATTTACCGTATCCTCTTAGGATAAAAGCTTTAAAAGATttgcaaataaagaaaaaagaacctCAAATTTTGAAAACTTTATTGACATCCAAACCTGAGGTGTTAGTTTCTGAACCTGAAATAATAAATTCGGGCCCAGAAAGTCCCGAAACATTGATTTCGGAACCCGAAATAGCCTCTTTCCAAGTAGAAACAATTCTGTCGGAGCCGGATACTTTTGTTAATACACATCCGGACGATGAAGATGAAAATAACCAAGGGCAGAATTATGACACTGTTGACATGGATTCAGACAACGAAATTGAAATTGCCCGCCAGGAAGAAAATGGGAGACATGCAGAAGGGGAGGAAAATTGTGTGGAAATCGAAGGCGATGATAATACCCAAGACGAGAGTAATTTACAAGAAAATCATGACGATATTGGAAAAGATGATCACAATGACAATGTTGAAAGTCAAGATGTTGATACGGAGAACAATGTTGATGGAGATGAGAATTACAACGATGCCAAAGAAAATGAATATGAGAGTAATGACAAGGAAGGTGAAGCAATAATTCACGAAGAAAACGACGACGATGACGATCTACCTCCTATGAGTATTGCGCCTGTCGttgaaataaatgaagaaaTGCAAACAAATTCCTATAATAGTGATGGAAATGAGGAAGAGTTAGACGAAACGGTTGACCCCAATGATACCGTCGACGGAGACGATATAAAAGACCTTGATCCTAATAAAGTTTATGTGACGAAAACACAACGAGATTTTATACTCAAATATAGAGATATTATAGAACAAATCAATACTAAACGTTGTTTATGTTGTAATAAAGAGCATCCCCGCAGAAAGGCGGTCATTCAGCATTTGCAAAAGAATGGTCATAAAGTTCCAAAACATACATGCTACAATTGCGTTGTCACATTCACTCATATAGGAGCCTTGTTAAGCCATATGCGATCAAACACGTGTACAGATCTATGGAAAATTATCTACAACGAAAATGGGATAACTGATGATATAGTACTGGAGGATGAACCCAAGGACTCGAAAGTTCAGTACAAGGACATCTTGAATGCGAGATCATATGCATGCAAGTTGTGTCCGgccaaatttcaattaaaacaatttattatgaaacatgTTCTCGATGTACATGAGGATGGGCAAACTCGCGTTCCTCATTCCTGCGTGCACTGCGGTTTGCGTTTCAAAGACAAAGCTATAGGAAAGAGACACATTCGTAATGGAGAATGTACTGTTTATATTTCTTGTGATTTATGTTCTGAAAAGTTTTTGAATTTACAAGATTTCAATGATCATGCCATAGCGGTGCATGCGGGTAGTTATGATCCAGAAAATCAGAGCAAGTGCGTCGACGGCCGTCCCACAGACTGTCCCATATGTGGAAAGAAGAACAATAGTTACCCTAATTTGGTGAAACATTTGAAGTGTATACACAACGAGGAGAAACCTCATCATTGTCAACATTGTGATTCCAAATTTGAGCAAACTGCTGATCTTAACAAGCACATCTATATGGAACACTCTGATAGGACGCTTGGCATGCAGACTTCCGAGCCTGATATGACTCTCGTGAAAGAAGAGGCAGAAGAGTACCACTACTCGTGTACAGAATGCAATTCTATTTTTGAAACCGTCGATGCATGGACAGACCACCAGGTCGCTGAACACAATCAAGTGGCTCACCATTGTGATCAATGCGAGAAGAAATTTTTACGCCCGTCAGAACTTGCGGAGCATAAGAACACGCATTTAAGAGTTAAATTCTATCCTTGCAGTATTTGTACTAATTCTTACAGCACACCTCTAAAGTTATCTGAACATGTACAGCAGGTCCACCCTGGAGCAGGGAAGACCCCAGGAGACACGGAATTCTTTTGTGACATTTGTATAAGATCATTTAAAAGCCGCCAAGCTTATTCCAATCATATGCGTATTCATGCGAAAGTGCCTACCACTAATAGAAAACCTGGAGAAAATAAAGGTTTTGCGCCACAAATTATAGGGAAGCCAATACGCCAGTTCTCTATGCAACCAGGTTTTAGTCCATATGTTCCAAATGCTCCTTATTGCTGTGATATTTGTGGAAAAGGATTTATGCACAAAAAGAATATATGGAAACATAAGAAGGTACTACATGCCGATCTACTCGCTGATAGAAACGACAGCGAGGAGAACACAATGCAAGCATCTACTGAAGAAGATGAATACAATATTGATGAAAATGGCGCTATTTTGTCGACTCCGcaatttaacagttttaatttCACTAATTTGTCGAATAATATGCAACAAACATCTCAAGATGCTTTACCATACTCTTGTGAATTATGTTACAAGAAGTTCCCTCTACGAACAAGTCTTTGGAAACACAAACGGGCAAAGCATGGAATTAATGCAAGTGCCGGTACATCGGAAACTCAACCACAACCTTCCAACGAAGGCACGAGATCTAGCTGtactatatgtaaaataacCTTCACAGACAAAAAATCGTACTACCGTCATAgaaaaaatgttcacaaatcATCAGTACAGATGTGCAAAATATGCGGAAAACCACTTAATTCGACATTAGAACTTTACGAACATCTGAAGGCGGCGCACGCTCGGGAACTGCTAGGGTATAATTCAAACCAGAGTTCAAATAAATCACAAGACGTAAGTCAAGACTTGGACGTGGAGGACGACGGAGATCACGACTCCGTCGATCCCAGCATCGACTACCAGGCACGATACCCCTGCGACACTTGTGGGAAACAGTTTGTGGGACTGTTAGCTTTACAGAACCATCAGTGTATCAATCAGATACAAAGCCAACCGCAAACATTTGATTGTGAAATATGTCACAAGAGCTACACTTCCATTGCGGCCCTGAAAAGTCACCGCGGCTGGCACTTGCGATCTCCCGACGGCAAGGCCGCTGCTAACAATTCGGGGCTTTGGATGCCTCAAAACAAGGTAACCAGCAAAGTCAGCAAACACGAAGTAATTGACATGCCTCAAAATACTCGCTCATCGACATCAGCAAACTTAGCCAAGAGACGGTTACCGCCCGAAGTGGAAGTGACCGTAGTGAACCCGAATAAAAAATTACGATCAGACGATTCCATAGACTTGGATCATCAAAACAATTTTTCTGGAGGGCCAGAAGATAGgtattgtaatatttgtgaCAAGGAGTTCACCAAGCGAGCCGCGTACCAGCGTCATATGGACGAGGTGCACCAACCGAATTCTGTATTCTGTCCAGTTTGCGACAAGTCGTTTACACGAAAGTCGACCTTAATTGTACATATGAAGAAACATTACGAGGGCGGAGAGGGCAGCTCCGGCACTCAAATAGACGAGGACGTCCACGCGTGTGAAGTGTGCGGCGCGCAGTTCGAAACCGCGAAGGATTTGAACACCCACCACGCGATGGAGCATGGGGACGAAGTGGACGACACGGGCGAATCTGAGGACGACGGTGGAGCTGTGGCACAGCCAGGGGAGTTCACTTGCGGCCAGTGCGGGGACGGAGTGGCGACCCCTCGCGACCTGATAGCTCACCGGACAATGCACTCGACTCCCACTAAGTTCTTCTGCAACATATGCAAGGTCTACTTCGCGAGGGCCCTCGACCTGTCCTCGCACACGCGGGCGAGGCACTCCGACAACGAAAAAGTGTTCTTCCCTTGCGCCATGTGCGACCGGTTTTATATGAACAAAAAGAGTTTACAGAGACACATCGAGATGGCCCACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRCELLPIFPTTSSDDSEPPVLASKIKDCVSVQISENDDLPTNVCRKCLDNVNNWHIFKTICERTQNRLQSFINKDSNLLEEVKIKNEPMSDEAYDDGVVIDGSYPDIENAGPLNKIQPEGPPILASLGLTPRSDKGMESEKEEDYEEEDEQELLEPRSYTNVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHGFDRYTNKVTNLKSRAHMQPKFRPNPFNPKARLMPNPISHKMQYHPKSMPNKMIPHKVVAQPKPIPIRTAKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPDTFVNTHPDDEDENNQGQNYDTVDMDSDNEIEIARQEENGRHAEGEENCVEIEGDDNTQDESNLQENHDDIGKDDHNDNVESQDVDTENNVDGDENYNDAKENEYESNDKEGEAIIHEENDDDDDLPPMSIAPVVEINEEMQTNSYNSDGNEEELDETVDPNDTVDGDDIKDLDPNKVYVTKTQRDFILKYRDIIEQINTKRCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDEPKDSKVQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQTRVPHSCVHCGLRFKDKAIGKRHIRNGECTVYISCDLCSEKFLNLQDFNDHAIAVHAGSYDPENQSKCVDGRPTDCPICGKKNNSYPNLVKHLKCIHNEEKPHHCQHCDSKFEQTADLNKHIYMEHSDRTLGMQTSEPDMTLVKEEAEEYHYSCTECNSIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICTNSYSTPLKLSEHVQQVHPGAGKTPGDTEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGENKGFAPQIIGKPIRQFSMQPGFSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLADRNDSEENTMQASTEEDEYNIDENGAILSTPQFNSFNFTNLSNNMQQTSQDALPYSCELCYKKFPLRTSLWKHKRAKHGINASAGTSETQPQPSNEGTRSSCTICKITFTDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNSNQSSNKSQDVSQDLDVEDDGDHDSVDPSIDYQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTSKVSKHEVIDMPQNTRSSTSANLAKRRLPPEVEVTVVNPNKKLRSDDSIDLDHQNNFSGGPEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSGTQIDEDVHACEVCGAQFETAKDLNTHHAMEHGDEVDDTGESEDDGGAVAQPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00897124;
- 90% Identity
- -
- 80% Identity
- -