Hsar014740.1
Basic Information
- Insect
- Heliconius sara
- Gene Symbol
- -
- Assembly
- GCA_917862395.2
- Location
- OU860794.2:8670736-8675907[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0037 7.4 7.1 0.4 14 32 7 26 2 32 0.76 2 14 0.007 14 6.2 2.8 6 33 24 55 22 61 0.71 3 14 0.0063 13 6.4 3.4 5 38 55 88 51 89 0.78 4 14 0.0005 1 9.9 0.9 6 38 84 116 83 123 0.83 5 14 0.017 34 5.0 5.0 8 38 114 144 109 150 0.81 6 14 0.0073 15 6.1 5.8 13 38 146 172 139 178 0.81 7 14 0.012 24 5.5 0.7 17 30 178 192 171 201 0.72 8 14 0.013 26 5.3 1.8 17 33 206 223 191 227 0.74 9 14 0.0018 3.6 8.1 2.1 14 33 243 263 236 268 0.79 10 14 0.0017 3.4 8.2 2.1 6 33 264 291 261 297 0.78 11 14 5.5e-05 0.11 12.9 4.7 6 38 292 324 289 325 0.87 12 14 0.0011 2.1 8.8 0.8 19 38 332 352 326 353 0.93 13 14 8.8 1.8e+04 -3.7 0.1 19 25 361 367 360 369 0.80 14 14 0.77 1.5e+03 -0.3 2.6 14 38 389 410 378 415 0.80
Sequence Information
- Coding Sequence
- ATGAGGTCGCACACAAACGACACCCCGTTCAGGTGCGACCTGTGCGGCAAGTCCTTCACCAGGAAGGAACATTTCACCAATCACATATTGTGGCACACCGGTGAAACTCCACATCGATGCGACTTCTGCTCTAAAACCTTCACACGTAAAGAGCACCTGCTAAATCATGTGCGTCAGCATACAGGGGAATCGCCGCATCGATGCAATTTCTGTGCGAAGTCCTTCACAAGACGAGAACACTTGGTCAACCATGTGCGACAACACACCGGCGAAACGCCTTTCCAGTGCGGATACTGTCCTAAAGCTTTTACTAGGAAAGATcatttagTGAATCATGTTCGTCAACACACGGGAGAGTCCCCACATAAATGTACATTCTGTACGAAATCATTTACACGCAAAGAGCATTTAACAAATCATGTGCGACAACACACGGGGGAATCCCCTCATCGATGTACATACTGCGCCAAGTCTTTCACTAGAAAGGAACATCTTACAAATCATATAAGACAGCATACGGGCGAGACTCCCCACAAGTGCACGTACTGCCCGCGCGAGTTCTCGCGCAAGGACCACCTGCAGCAGCACGTGCGCCAGCACACGGGCGACGCGCCGCACACCTGCAGCTACTGCAGCAAGAGCTTCACCAGGAAAGAGCACCTCGTTACGCACGCCAGGTACTGGGATTGGGGAGACGATGGAAAAGTTCATTTACAACATACTGGCGAAACTCCATTCAAATGCACGTACTGCTCGAAGTCGTTCTCACGTAAGGAGCACCTCACGAACCACGTGCACCTTCACACTGGTGAAACACCGCACAAATGTCCGTTCTGTACTAAGACCTTCTCTAGGAAGGAACATTTAACTAACCATGTCagaATACACACAGGCGAATCCCCTCACAGATGCGAGTTCTGTAACAAAACGTTCACAAGAAAGGAGCATTTGACAAATCATTTAAAGCAGCACACGGGTGATACGCCGCACGCGTGCAAGATATGCTCCAAACCGTTCACCAGGAAAGAACATTTAGTGACACATATGAGATCCCACAGTTGTGGAGAGAGACCACACATTTGCGGCGAATGCGGAAAATCCTTCCCCCTCAAGGGTAATCTGCTGTTCCACGAGCGGTCACACAATAAAGGCGCTAATGCGTCAAACAAAACGTTCCGATGTGACGTGTGTTCCAAGGAGTTTATGTGCAAAAGTAATTTAGCATCTCATCGAAGAACCCACACAGAGACGGGCGAGGGCACTACAACTACAGAGCCCACACCTGAAAATGAAGATTGTGGAGATAAAGAGTCACCAGAAAGACCTGAGAGAAAACACGATACAAGagcGTCATCAGAAAGCAGAGCTACAGAAGCCACTGCTACACAAAATCCATCGCCAAATCCAAACCCAACTGTCATGCAAATTAATAGCCAGCAAGTCCGAACGGGCCCTACGACCACCACCAGCGTGGCAACAGGCACGTTCACCCACACTGCCACCACACAGCACCACGCCTCTACCAGTATAGCCCACCATCCTGTTACTGTGAATTACTAG
- Protein Sequence
- MRSHTNDTPFRCDLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPREFSRKDHLQQHVRQHTGDAPHTCSYCSKSFTRKEHLVTHARYWDWGDDGKVHLQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCNKTFTRKEHLTNHLKQHTGDTPHACKICSKPFTRKEHLVTHMRSHSCGERPHICGECGKSFPLKGNLLFHERSHNKGANASNKTFRCDVCSKEFMCKSNLASHRRTHTETGEGTTTTEPTPENEDCGDKESPERPERKHDTRASSESRATEATATQNPSPNPNPTVMQINSQQVRTGPTTTTSVATGTFTHTATTQHHASTSIAHHPVTVNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00778898;
- 90% Identity
- iTF_00778898;
- 80% Identity
- iTF_00782804;