Hsar018336.2
Basic Information
- Insect
- Heliconius sara
- Gene Symbol
- -
- Assembly
- GCA_917862395.2
- Location
- OU860798.1:4515691-4518103[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-07 0.00013 22.0 0.0 1 42 19 60 19 63 0.93 2 2 5.9 5.7e+03 -2.4 0.0 14 22 143 150 138 150 0.76
Sequence Information
- Coding Sequence
- ATGCCTCGCAAGTATAAACGAAAGCCAGGCGTTGTGCCACGCCACATCAACTGGACTGAAGATAGCTTAGCACTTGCGTTCGaagatctaaataaaaaacagaaaagtaTCAACGAAATATCCCGAATTTATGGCATATCGTCTCGAACTTTAAGAAGGCGGTTTGAACAGAGAAATAAACTACTGCTGACACAAGGAAAATACCCTGTCCTTGGCTTCGAAAATGAAAAAAGACTAGTATCTCATATACTAAAACTTGGAGACGCAGGATTTCCTCCTGAAAGGAGTTTAATTCGCCAATTAGCCTATCAGTTTGCCGAGAAACTAGGATTAAAGCACAATTTTAACAACGACATTAAAATGGCTGGACCGCAATGGTTGAAAAGCTTCCTTGAAAGAAATCCCGAAATAGTCGTGAGGCAAGCTGAGGGCTTGTCAATTCAAAGAGCGAAGGGTCTAAGCAGGGCCGAAGTAGCCAAATTTTTTGATCTTCTCATAACCGTCTTAACTGAAAATGATTTGCTGGATAAGCCAGAGAGAATTTTCAATATGGATGAAAGCGGTGTCCAACTCAACAATAAACCTGGCAAGGTATTAGCCAAGAAAGGTACTAGAGCAGTGAAGTCACTTACTTCGGGGGAAAAAGGCGAAACAATTACTGTTGTTGCTTGTTGCAACGCTATCGGCAATTTTCTCCCACCTGTTTTGATTATGAAGGGGGTAAATAAAAAGCCAGAATTTGAAGAAGGACTTCCTCCTGGTTCCAAagtttatatgcaaaaaaaatcagcatATATTACCTCTGAGCTTTTTTACAAGTGGCTGACTGAACACTTTATACCTCGCAAGCCTCACGGAAAGGTTTTACTAATTTTAGATGGTCATTCATCACATTCTAGTGCTGTCAATATGCTAGAAACTGCTCATGACAATGATGTGATACTGCTTTGTTTACCTAGTCATACTACTTCTGCTTTACAACCTCTAGACGTATCTGTTTTCGgaccatttaaaaaatattattatgcggAGACTAACAATTTTATTCGCACCAACCCACAAAAAAAACTGAACCGGTACAATTCTGGTCAACTGATAGCAAGGGCTTGGATTCGAGCAACTACATCTGCCAATGCAATAGGTGGTTTTCGCAGCAGCGGAATCTATCCAGTTAATCCAAATGGTCTGTCTGATGCTGAATTTGCGATATCAGATATTGCATTGGGGGAGTTTACGCAGGGAAAAGAGTCTGAAACTATAAAAGATCAAGTACCAGGTACTTCTGAAGAACTTGCGTTACGTGTGCGCAATCAGGAATCTAAATGTGACCGAGATAATGTACTAAGTCGACAGAATGAAGTGACTCTACAAGGCGATCAAGTCCAAAGCTACTGTCATAAGAATAATCCAGAAACTATTGAAAATGAAGCTGAGCAGAATAGCGTGAACCAAAGTTGCACGCCACCTAGGCCGTCCTTGAGTCTTTTGGCTTTTTCTCATGAATGTTTAGCCCTAGAAGATAgcgaaattgaaaattatattttagataatactGAACTATCATTACCCTCGCTGATATCTTTAAATGAGTCACAGAACAAAGATCTACAAAAAGAAACACCATCGAAATTTTTACATCAATCATCTCCTATACCAAAAGTTCCGCTGAGTATTTCTAAAAGGGCTAAACAATCAGCCGAAGTTTTAAACTCGAATGATAAAATAATCGAGAAGAAGAATAAAACTGAGAGAGTAAAGAAAATAAGCATATTGAAACAAACGgaagaaacaaaaaacaatccAGTTGGTCGCAAAGAAAAGATTACGAAGAAAAGAGAGCGacctcaaaataataaaaaatcaaaacaaaatagagATATTACCAGCAGTAAATCAGAATCAGATAGCACAGACGATTTTATTGAACTAACTAAAGGAAAGgctttaaagaaaagaaaaaaatgtatttacagttctaatagtgaaaatgaagaaaatgttATAAGTTCAAAAACATCTAAAGGGAAAGCAACTAAAGGGTTACCaatcaaaggaaaaaaaaacaaaacatctaTTAGAGACactgaaaacatattaaaagtaaaaaatgcaaattcaaaaaaagaaaataccaacaaaaaagttaaagttGATAATTATTGTGcagaatgttttgaaaattataatttaactaaatcaaaatcagatTGGATCCAATGTGAGATGTGTCGAATGTGGTTGCATGAAACTTGTACAACATTCAAAAAGCATTGCATGAGATGTGGCAAGTTGAAAATCTTGGCTTCTGGTGATAATCAATGCTAA
- Protein Sequence
- MPRKYKRKPGVVPRHINWTEDSLALAFEDLNKKQKSINEISRIYGISSRTLRRRFEQRNKLLLTQGKYPVLGFENEKRLVSHILKLGDAGFPPERSLIRQLAYQFAEKLGLKHNFNNDIKMAGPQWLKSFLERNPEIVVRQAEGLSIQRAKGLSRAEVAKFFDLLITVLTENDLLDKPERIFNMDESGVQLNNKPGKVLAKKGTRAVKSLTSGEKGETITVVACCNAIGNFLPPVLIMKGVNKKPEFEEGLPPGSKVYMQKKSAYITSELFYKWLTEHFIPRKPHGKVLLILDGHSSHSSAVNMLETAHDNDVILLCLPSHTTSALQPLDVSVFGPFKKYYYAETNNFIRTNPQKKLNRYNSGQLIARAWIRATTSANAIGGFRSSGIYPVNPNGLSDAEFAISDIALGEFTQGKESETIKDQVPGTSEELALRVRNQESKCDRDNVLSRQNEVTLQGDQVQSYCHKNNPETIENEAEQNSVNQSCTPPRPSLSLLAFSHECLALEDSEIENYILDNTELSLPSLISLNESQNKDLQKETPSKFLHQSSPIPKVPLSISKRAKQSAEVLNSNDKIIEKKNKTERVKKISILKQTEETKNNPVGRKEKITKKRERPQNNKKSKQNRDITSSKSESDSTDDFIELTKGKALKKRKKCIYSSNSENEENVISSKTSKGKATKGLPIKGKKNKTSIRDTENILKVKNANSKKENTNKKVKVDNYCAECFENYNLTKSKSDWIQCEMCRMWLHETCTTFKKHCMRCGKLKILASGDNQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451396;
- 90% Identity
- iTF_01451399;
- 80% Identity
- -