Hsar018417.1
Basic Information
- Insect
- Heliconius sara
- Gene Symbol
- Mblk-1
- Assembly
- GCA_917862395.2
- Location
- OU860798.1:5912077-5957297[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-14 1.9e-11 43.9 0.0 1 39 277 316 277 321 0.93 2 2 1.4e-18 1.4e-15 57.1 0.0 1 43 485 528 485 530 0.95
Sequence Information
- Coding Sequence
- ATGGTATTGATTAGGGTGATCGTCCACTGTGATATAACTTTGTGTCTAGAACGGGTGGCAGAGGAGTTGATGGGTCGCAGAAAATGGAAACAATACCAAGACGGTTTGATACATCGCACAGAGGACGCGCAGTCGAGCGACGACGACATCGCTGCCACCGACCCCCCTCCCGCGCTGAAGATCAAGACGATAGAGCAGATCAACGAAACGGACAAAACGGACAAATCGGGCAAAACGGAGATTACGGGCAAAACGGAGATTCCGGACAAAGCGGAGAGAAGGGAGACGATACTAGAGAGCTTGATCAAGAGGCCAGCTACACAGCCCAAAGTGGAGGTCCAAGAGGAGCCCACGGACTGGAAACCAGCGGACAGATGCTATTTCTGCGTTGACGGCGAAGGCGAtagggcggcgggcggcgcgacGAGTCCAGCATCGGAATCAGACAGCAGCTCGGTGTCGGGGGCGAAGAGCCCCGCGGGGCCGCCGCTGTTGCAGCACCTACTGCAGCTGCAGCTACAGGGGCAGAACCCGCAGGCGATCGCACAGTTCCAGCAGATGATCGCGGCTCTTGCGGCTCTCGGCACCGGCCTACTACCCCCGGCGTGGATGATGCGGCCGAGGCAGGTTGATAGCAGGCTACCCGAAGACAAGGTAGCTGCACCCAGCTCATCACCAACGATCGCGGAACAGCCCCTGGACCTCAGCGCGAAATCTACATCCAGCACCAGCGGCACTCCACCTCCTGACACCAAAAACGTGGATAATGCTAGATTAAAACGAGCAGTCCTCGAAGGCTCCAGTAACAGTGCTACAAGACGAGCTTACACCGAAGATGAACTGCGATCTGCTCTGCAGGATATCCAATCTGGGAGGTTGGGAACTCGCCGGGCCGCCGTTGTATACGGCATACCTCGCTCCACTCTTCGCAACAAGGTCAACAAGTTTGGTCTTATGTCGGATACTGGTCAGGAATCAGATCCGGATAGTGAACCCGATAAAGCAGAATCGCCGCCATCCGTTATCCTCAAAATACCGACTTTCCCACCTCCAGATGAAAAAAGTCCTTCGCCAGCAACGTCCATCACTACCCCAGTTACACCTATCACCCCGCTCCTACCACCTCAGCCACCGCTCAATCCACCATCCCAACTTTTACTCCCACCATCAGTTTTTGCAGATCCACCTTCCTCTCAGCACCTTTTTACATCACTAAGTGATGTCATAGCAAAAAGCATCAGCCAAAAGTTCCAACAGCCACTAGATAGACCACAACCGTCGGACCTGCAGTACATGCGAGCACCTGATAGACATGTATCCGTAATTAAAACTCCTCCAGACAATCAGAGAAATTACGCGATGCCCAGCAACTCAAAAGCTACGCCTAATAACGGGCAACCGGCCGCCGGCGGAAAAGGCACTAGGCCCAAACGTGGAAAGTACAGAAACTACGACAGAGATAGTTTAGTGGAAGCGGTGAAAGCGGTCCAGCGCGGTGAGATGTCCGTCCACCGCGCGGGCTCATACTACGGAGTGCCGCATTCAACGCTTGAGTACAAAGTGAAGGAGCGGCATCTGATGCGGCCGCGAAAACGAGAGCCGAAACCCCAACAGGAAGTGAAGCCTCAACCTCCGAAGCCTCCACCGAAACCTCCCACAAAGTTCACCAACGGATTGAACGGACCGGACAGCTACCCCAACTACCCGTTCTGGCCGGGAGGGTTCGCGCCGCCGGCCCCCGACCTGTACGCGTCGCACATGATGAGGCGCCTGCGCGAGGAGGCCCCCCCGCCCGCCAACGGGTCCTTTCCTGGAGGGCATCATCCGCTCGAGCCTGGAGCGGCCGGCCGCGCTGATGCAGCGGCTGGCGGCGCCGCCCTCGCCGCCGGGCGCGCCGCCCGGGGCGCCAGGCGCGctgcggcgcggcggcggcgcggcgggcgacGAGCCGGCCGCGCGGCGCCCGCGCCTCGACTCCGACCACCAGCTCGCGGCCGACATGCGCGAGGCCGTGCAGCGCCTGCGCCAGGACAAGGGGCGCGCGCGCAACGGCACGCCCACGCCGCCGCCCGCCGAGCCCGCGCACCCGCACCCCCACGCGCACCCCGGCCCCGCCTAGCCACTGTGATAATTAGTATTGCCAGATACAGTACACTCCTTCGGGACATCAGCCCGAGCGGCCCATCAGTGCAGTGCGGTACTGGCGCCGCGCAGCCCAGGCGCGGTGGCCGTCTGGCAACACTAGTGATAATGTACATTCCGCGGCACGTAGCGACGCTCTCCCTTACTTACGGTTCCGCTTCGTCACCAAATATCACAGTTACCTACCGGTTCAATACAACACAGCTTTACTGA
- Protein Sequence
- MVLIRVIVHCDITLCLERVAEELMGRRKWKQYQDGLIHRTEDAQSSDDDIAATDPPPALKIKTIEQINETDKTDKSGKTEITGKTEIPDKAERRETILESLIKRPATQPKVEVQEEPTDWKPADRCYFCVDGEGDRAAGGATSPASESDSSSVSGAKSPAGPPLLQHLLQLQLQGQNPQAIAQFQQMIAALAALGTGLLPPAWMMRPRQVDSRLPEDKVAAPSSSPTIAEQPLDLSAKSTSSTSGTPPPDTKNVDNARLKRAVLEGSSNSATRRAYTEDELRSALQDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLMSDTGQESDPDSEPDKAESPPSVILKIPTFPPPDEKSPSPATSITTPVTPITPLLPPQPPLNPPSQLLLPPSVFADPPSSQHLFTSLSDVIAKSISQKFQQPLDRPQPSDLQYMRAPDRHVSVIKTPPDNQRNYAMPSNSKATPNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPQPPKPPPKPPTKFTNGLNGPDSYPNYPFWPGGFAPPAPDLYASHMMRRLREEAPPPANGSFPGGHHPLEPGAAGRADAAAGGAALAAGRAARGARRAAARRRRGGRRAGRAAPAPRLRPPARGRHARGRAAPAPGQGARAQRHAHAAARRARAPAPPRAPRPRLATVIISIARYSTLLRDISPSGPSVQCGTGAAQPRRGGRLATLVIMYIPRHVATLSLTYGSASSPNITVTYRFNTTQLY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212348;
- 90% Identity
- iTF_00780187;
- 80% Identity
- -