Hmel002514.1
Basic Information
- Insect
- Heliconius melpomene
- Gene Symbol
- Mblk-1_1
- Assembly
- None
- Location
- Hmel219001o:4714824-4756928[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-15 1.2e-11 44.3 0.0 1 39 272 311 272 316 0.93 2 2 4.5e-19 8.6e-16 57.5 0.0 1 43 480 523 480 525 0.95
Sequence Information
- Coding Sequence
- ATGCAATGCCTCCAGTATTTAGCGGAAAGTCTAGAACGGGTGGCAGAGGAGTTGATGGGTCGCAGAAAATGGAAACAATACCAAGACGGTTTGATACATCGCACAGAGGACGCGCAGTCGAGCGACGACGACATCGCTGCCACCGACCCCCCGCCCGCGCTGAAGATCAAGACGATAGAGCAGATCAACGAAACAGACAAGACGGACAAATCGCCCAAAACGGAGATTACGGGCAAAACGGAGATTCCGGACAAAGCGGAGAGAAGGGAGACGATATTAGAGAGCTTGATCAAGAGGCCAGCTACACAGCCCAAGGTGGAGGTCCAAGAGGAGCCCACGGACTGGAAACCAGCGGACAGATGCTACTTTTGCGTTGACGGCGAAGGCGACAGAGCGGCGGGCGGCGCGACGAGTCCAGCATCGGAATCAGACAGCAGCTCGGTGTCGGGCGCGAAGAGCCCCGCGGGGCCGCCGCTGTTGCAGCACCTACTTCAGCTGCAGCTACAGGGGCAGAACCCGCAGGCGATCGCACAGTTCCAGCAGATGATCGCGGCTCTTGCGGCGCTCGGCACCGGCCTACTACCCCCCGCGTGGATGATGCGACCGAGGCAGGTTGATAGCAGGCTACCCGAAGACAAGGTAGCTGCGCCCAGCTCATCACCAACGATCGCGGAACAACCTCTGGATCTCAGCGCGAAATCGACGTCCAGCACCAGCGGCACTCCACCTCCTGACACCAAAAACGTGGATAATGCTAGATTAAAACGAGCAGTCCTCGAAGGCTCTAGCAACAGTGCTACAAGACGAGCTTACACCGAAGATGAACTGCGATCTGCTCTGCAGGATATCCAATCTGGGAGGTTGGGAACTCGTCGGGCCGCCGTTGTCTACGGCATACCTCGATCCACTCTTCGCAACAAAGTCAACAAGTTTGGTCTTATGTCGGATACTGGCCAGGAATCGGATCCGGATAGTGAACCCGATAAAGCAGAATCACCACCATCCGTTATCCTCAAAATACCGACTTTCCCACCTCCAGATGAAAAAAGTCCTTCGCCAGCGACGTCCATCACTACCCCAGTTACACCCATCACTCCGCTCCTACCACCTCAGCCGCCGCTTAACCCCCCATCCCAACTTTTACTCCCACCATCAGTTTTTGCAGATCCACCTTCCTCTCAGCACCTTTTTACATCACTGAGTGATGTCATAGCAAAAAGCATCAGCCAAAAGTTCCAACAGCCACTAGATAGACCACAACCATCAGACCTGCAGTACATGCGAGCACCCGATAGACACGTATCCGTAATTAAAACTCCTCCAGACAATCAGAGAAATTACGCGATGCCCAGCAACTCAAAAGCTACGCCTAATAACGGGCAACCGGCCGCCGGCGGAAAAGGCACTAGGCCCAAACGTGGAAAATACAGAAACTACGACAGAGATAGTTTAGTGGAAGCTGTGAAAGCGGTCCAGCGCGGTGAGATGTCTGTCCACCGTGCGGGCTCATACTACGGAGTGCCGCATTCCACACTAGAGTACAAAGTAAAGGAGCGGCATCTGATGCGGCCGCGAAAACGAGAGCCGAAACCCCAACAGGAAGTGAAGCCTCAACCTCCGAAACCTCCACCGAAACCTCCCACAAAGTTCACCAACGGGCTGAACGGGCCGGACAGCTATCCCAACTACCCGTTCTGGCCGGGAGGATTCGCGCCGCCGGCCCCCGACCTGTACGCGTCGCACATGATGAGGCGACTGCGCGAGGAGGCGCCCCCGCCTGCCAACGGCGCCTGCGCCAGGACAAGGCGCGCCCGCGCAACGGCACGCCCACGCCGCCGCCCGCCGAGCCCGCGCACCCTCACCCCCATGCCCACCCCGGCCCCGCCTAGCCACTGTGATAATTAG
- Protein Sequence
- MQCLQYLAESLERVAEELMGRRKWKQYQDGLIHRTEDAQSSDDDIAATDPPPALKIKTIEQINETDKTDKSPKTEITGKTEIPDKAERRETILESLIKRPATQPKVEVQEEPTDWKPADRCYFCVDGEGDRAAGGATSPASESDSSSVSGAKSPAGPPLLQHLLQLQLQGQNPQAIAQFQQMIAALAALGTGLLPPAWMMRPRQVDSRLPEDKVAAPSSSPTIAEQPLDLSAKSTSSTSGTPPPDTKNVDNARLKRAVLEGSSNSATRRAYTEDELRSALQDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLMSDTGQESDPDSEPDKAESPPSVILKIPTFPPPDEKSPSPATSITTPVTPITPLLPPQPPLNPPSQLLLPPSVFADPPSSQHLFTSLSDVIAKSISQKFQQPLDRPQPSDLQYMRAPDRHVSVIKTPPDNQRNYAMPSNSKATPNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPQPPKPPPKPPTKFTNGLNGPDSYPNYPFWPGGFAPPAPDLYASHMMRRLREEAPPPANGACARTRRARATARPRRRPPSPRTLTPMPTPAPPSHCDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212348;
- 90% Identity
- iTF_00782563; iTF_00779434; iTF_00775186;
- 80% Identity
- -