Basic Information

Insect: Heliconius numata
Gene Symbol: -
Assembly: GCA_016802625.1
Location: JAEBDU010000038.1:3208971-3214722[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 4.3 4.3e+02 2.4 0.0 2 17 73 88 73 89 0.86

2 29 7.5e-05 0.0075 17.4 0.4 1 21 162 182 162 183 0.95

3 29 4.8 4.8e+02 2.3 0.2 3 19 191 206 190 211 0.72

4 29 0.01 1 10.6 3.6 1 23 216 239 216 239 0.97

5 29 0.0082 0.83 11.0 0.5 3 23 246 266 245 266 0.96

6 29 0.65 65 5.0 5.6 3 21 271 289 270 290 0.94

7 29 0.00031 0.032 15.4 2.8 2 23 333 355 332 355 0.95

8 29 0.0025 0.25 12.6 0.3 1 23 388 410 388 410 0.98

9 29 0.00097 0.097 13.9 0.6 1 23 416 439 416 439 0.97

10 29 0.00082 0.083 14.1 1.8 2 23 449 471 448 471 0.97

11 29 3.9e-05 0.0039 18.3 0.5 1 21 592 612 592 613 0.95

12 29 2.3 2.4e+02 3.2 0.1 3 23 619 639 618 639 0.77

13 29 0.2 21 6.6 0.4 3 23 646 667 645 667 0.96

14 29 0.0028 0.28 12.4 1.3 2 23 673 694 672 694 0.97

15 29 2.9 2.9e+02 2.9 5.2 1 21 697 717 697 718 0.94

16 29 0.00062 0.062 14.5 0.5 1 23 730 753 730 753 0.93

17 29 0.1 10 7.5 3.8 1 23 759 781 759 781 0.95

18 29 2.8 2.9e+02 3.0 0.5 1 23 815 838 815 838 0.87

19 29 1e-05 0.0011 20.1 0.7 3 23 845 866 845 867 0.98

20 29 0.00093 0.094 13.9 1.2 2 21 976 995 975 996 0.94

21 29 0.41 41 5.6 0.1 3 23 1003 1024 1002 1024 0.96

22 29 0.14 14 7.1 0.6 1 23 1029 1052 1029 1052 0.96

23 29 0.00054 0.054 14.7 0.4 2 23 1058 1079 1057 1079 0.97

24 29 0.38 38 5.7 1.9 2 21 1083 1102 1083 1103 0.92

25 29 2.1e-05 0.0021 19.1 1.4 1 23 1129 1152 1129 1152 0.95

26 29 0.0013 0.13 13.5 0.4 1 23 1158 1180 1158 1180 0.92

27 29 0.099 10 7.6 0.1 1 23 1186 1208 1186 1208 0.97

28 29 0.00053 0.054 14.7 0.5 1 23 1214 1237 1214 1237 0.96

29 29 0.0011 0.11 13.8 2.5 2 23 1244 1266 1243 1266 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	4.3	4.3e+02	2.4	0.0	2	17	73	88	73	89	0.86
2	29	7.5e-05	0.0075	17.4	0.4	1	21	162	182	162	183	0.95
3	29	4.8	4.8e+02	2.3	0.2	3	19	191	206	190	211	0.72
4	29	0.01	1	10.6	3.6	1	23	216	239	216	239	0.97
5	29	0.0082	0.83	11.0	0.5	3	23	246	266	245	266	0.96
6	29	0.65	65	5.0	5.6	3	21	271	289	270	290	0.94
7	29	0.00031	0.032	15.4	2.8	2	23	333	355	332	355	0.95
8	29	0.0025	0.25	12.6	0.3	1	23	388	410	388	410	0.98
9	29	0.00097	0.097	13.9	0.6	1	23	416	439	416	439	0.97
10	29	0.00082	0.083	14.1	1.8	2	23	449	471	448	471	0.97
11	29	3.9e-05	0.0039	18.3	0.5	1	21	592	612	592	613	0.95
12	29	2.3	2.4e+02	3.2	0.1	3	23	619	639	618	639	0.77
13	29	0.2	21	6.6	0.4	3	23	646	667	645	667	0.96
14	29	0.0028	0.28	12.4	1.3	2	23	673	694	672	694	0.97
15	29	2.9	2.9e+02	2.9	5.2	1	21	697	717	697	718	0.94
16	29	0.00062	0.062	14.5	0.5	1	23	730	753	730	753	0.93
17	29	0.1	10	7.5	3.8	1	23	759	781	759	781	0.95
18	29	2.8	2.9e+02	3.0	0.5	1	23	815	838	815	838	0.87
19	29	1e-05	0.0011	20.1	0.7	3	23	845	866	845	867	0.98
20	29	0.00093	0.094	13.9	1.2	2	21	976	995	975	996	0.94
21	29	0.41	41	5.6	0.1	3	23	1003	1024	1002	1024	0.96
22	29	0.14	14	7.1	0.6	1	23	1029	1052	1029	1052	0.96
23	29	0.00054	0.054	14.7	0.4	2	23	1058	1079	1057	1079	0.97
24	29	0.38	38	5.7	1.9	2	21	1083	1102	1083	1103	0.92
25	29	2.1e-05	0.0021	19.1	1.4	1	23	1129	1152	1129	1152	0.95
26	29	0.0013	0.13	13.5	0.4	1	23	1158	1180	1158	1180	0.92
27	29	0.099	10	7.6	0.1	1	23	1186	1208	1186	1208	0.97
28	29	0.00053	0.054	14.7	0.5	1	23	1214	1237	1214	1237	0.96
29	29	0.0011	0.11	13.8	2.5	2	23	1244	1266	1243	1266	0.95

Sequence Information

Coding Sequence: ATGACCCGACAAGTCGATGTAAAGGCTCTAGTTTCGCACATAGTGCGCGGAGACGGCGCAAATAAATGCCGAATATGTTTAGGTGATACAACGGAGGGACAAGTCTACTTAAGCGATACAGTAATGATGGATGGTGATAAAGCGGTTACTTTATCGGAAATATTGGAAACAATAACTGGAATAAAGGTGGTGATGGAAGGGGACTTACCCGAGGGAGTCTGTCCTGAGTGCTCCAGATCAGCTACAAATGCTGCTGAGTTCAAATTATTATGTCAAGCAGCAGCTCAGCAATGGGATACCACTATAGCTCTTCTCCATGACCTGCCTACCCAATGCACAGACAATAAAACCATTTTTGCTATAATTGACAAAAATAAAATGATTGCCATTAATGATATGAAAAAATCGTACAACCATACCACTGCAGCTCTTCGATTAACTAAATACTTATCCAAGTGTCCAGAACCTAAAAAGGACAGTATATATAAATGTCCAAATTGTGATAAAAGTTTCTCGAGTCCAATTAAATTTAGTTTACATTTGAAAGAATCTCCAGATTTGCAACGAGCATGTTACGTATGCGGCGCTATCGTATCTCATAATAGTTTGCTAAACCATTTAATTAAGAAACATAAGGAAAAACCATTTAGTTGTAAGAAATGTACAGCAGTATTCCGTTCTTATAATCAATATATGCATCATGTGGAGACAACTCATAAGTATGGTCGGGCCTTCTGCGGTGATTGCGGACGTAGTTTTCAGTCGCTTAATGCTTATCATGCTCATGTTTCGATACATGTATCTAAAAACTGTCCAAGCTGTGATAAACTATTCCGTAACCATTCCTGCTATATGCATCATACAAAGAACTGTTGTGAATTATACAGTAAGAAAAAAATTATGAAAAAAAAAAAGAATGTTACTATAGAAATTAATAATGCAAAAAACAATCGTAAAATCAATATAGGGCATCGAGGAGCTACGTGCAAAGAGTGTATATGTGATTATTGTGGCAAAACGTTTGCCAGAAAGAAATTCATTTGTGCACATATACAGATAGTCCACATGAGGAATACCCACCGTCCCTGCATTTACTGTGGAAAGCTGTTAGCATCAGCTCATATGTCAGAACATATGAAACAGCATAAGCCTGATTGTACCTACACTTGTGAACAATGTGGCATAATATTAAAAACTAAGTTGGGATACAATCAACATATACGTTTACATACTGGAGAGAGACCCTACGAATGTAAGCAATGTGGGGAAACATTCTCAGCATCTTCAAGACGGTCAGAACATATACGGAAAGTTCACAAAACAAAAGATATAATTCTAAAGCAGCAGTGTCACCTCTGTCCAGCCAAGTTCAGGTTGCCATATCGACTGAAAAGACACCTGAGGTCAGTCCACAATGATGACCAGGATCAAACTCCTCAGTTTGAATGTACTGTGGTGGACGAAACCGACTTTCCCGCGGCGTTGTGCTGCGCGTGCGCTAATAACGCCATATCGGCGTGGCAGTTCAGACACCTATGCCATGAGTCGCACAACCATTGGACTAAAATTACCGAGGCCCTGATGATACCAGAAAATCCAACTAAACAAGATAAGACCTTTTATATAACGTGTAATGGAACTGTCTTTAATGATTATGTGGCTGTTAGTCAGTCTCGAGAAGATGCTATCAAAAGACTGAATTTTTTGTCTGGTGCTAAACATAAAATTCGTGCGAAATATAAAAAGAAATGTTCCAAAAAGAGCGTAAACAAGTACAAGTGCAAGGATTGCGGTAAACAATTTGAAGTACCCTATTTCTTAAATCGACATTTGCTAAATTCTTCGGTACGCGCTTGCACATTGTGTGGGAAGGTTGTGTCGAAAGAAAAATTACCAGTACATTTGGAGAGGTCTCACCAGCTTATGGTCGAATTTTGTGATATTTGCTATAAGTTATTTGATGATAGACTTCTTTTGGATCGCCATAAACAGATATTGCATGCAGATAGCAGCTTACAGTGCAATACCTGTAGGAACGGCTTCAAAAATGATCGATCCCTTAGAGCTCATATGTACACACATACCCTTTTTAACTGTTCATTGTGCAACAGCAGTTTTGAAAACAGAAAATGTTACTTACACCATAGGAACAATTGTCAAGGATCCAAATGTACGAATCAATATATTTACGAATGTAACGACTGCGGGAGCAAATATACTAAAAAACCGTCTTTAAGAGTACACATAGTCCAGAAACATTTAAATGTTCTACCATATATTTGCCAAATTTGTGGGAAACGAAGTTCTTCGAAGACCCACCACAAATCTCACGAATTAGTTCACAAGACTGAAAGAAAAATATATCAGTGCTTCTGCGGCGCCAAGATGAGAACAGTCCACGGCTTTCAAATGCATCAGAGGATCCATTCTGGGGAGAAACCATATGAATGTCAGGAATGTGGGGACAGGTTTCTATCGGCTTCCAGAAGGTTGGATCATATAAAGAGAAAGCATAGACGGAAAAATCTTGGCTGTGATGAGTGTGATGCAAGATTTGTTAGACCTTCGGAGTTGAAGAAGCACTGGAGGACTGCCCATCATGTGCAAGAGGATCAATTGTTTCCACGAGGCCTGTGCGTGTCCTGCACTAGGGTAGCCGTGTCTGCTTCGGAATTCCGAATTTTTGTAACGAAATCACAGCGATTGTGGTCTAATTGTATAGACTCCCTTCACACTCTTCCAACTCTGAATACTTCCCAAAAATCCCTATATGCAATCGTTAGAGAAAACCTGTTGCTACAAACTGTCAATCATTTTGAAGGGAATGCAAAAGATTTGTTAGAACATTTAACTAATAGAATTGTGAAACGAAAGAATTTATTAGTGGAACGGAAACCTAGGCATCCTAGGACAGGACCAGCGTGCAGCTGCACAGATTGTGGCAAGAGCTTCCTTAGTCCATATTACCTAAATATGCATTTACGGAACAGTGGACAGAAGGAAGCTTGTTGGCTCTGTGGCGCCATGTTAACACGAGGGCAAGAAATGAAAGAGCATCTACGGAAAATACACAAAACCGAAATGTTTATTTGCTCAGAATGTCCATTGCTTTTTAAAACAGACGTGGACAGAAAGCGTCATGCCAAAAAAAATCATGGGCCCGGTGTCATGACATGCGCAGATTGTGGCAGAACATTCCAGAGGAGTGCGTCTTTCGATGTACACACACAAATGCACACAGTACGTACATGTAGATCCTGTGGAGCACAGTTTACGAATCGTGGCTGTTACAGAGCGCACAGGTCCAAGTGTGAACCTGACGCTAAACCAGATTTGAAGACGATACCAAGAAACAGACGTTCTAATATCCGTGACCCGGCAACTTTCACTTGTGATTATTGTGGCAAGACCTACCATTCGCGTCCGCAATTAAAAAATCATATACTATGGATTCACATGGATATACGACCTCATCAGTGTCAGTGGTGTGGAAAAAGGTTTTATACGCCAGCCCGTTTGGCCGAACACTCAGTAGTTCATACGAGAGTGAGGAATTTTGAATGTGATATCTGTGGTGCCAAGTTAGTGTCCAAAATGGCGGCGGTGTACCACAGGAGACGGCACACAGGTGAAAGACCATACGAATGCCCAGATTGTGGAGAAAAGTTTATATCTTCATCTCGTAGAACGGAGCATGCCAAGCGAAGACATAATAAAGGTTCGCGTATCCATTGCTCGGAATGTCTGGCGAGTTTTGTTAGGAATCATGAATTAAAGAAACATATGGACAAAGTTCATAATAATGAAAATCATGTTGTTGTCAAAATAAAAAAGGAGAACAAAGAGTATCATATGAAGGCTGTATGA
Protein Sequence: MTRQVDVKALVSHIVRGDGANKCRICLGDTTEGQVYLSDTVMMDGDKAVTLSEILETITGIKVVMEGDLPEGVCPECSRSATNAAEFKLLCQAAAQQWDTTIALLHDLPTQCTDNKTIFAIIDKNKMIAINDMKKSYNHTTAALRLTKYLSKCPEPKKDSIYKCPNCDKSFSSPIKFSLHLKESPDLQRACYVCGAIVSHNSLLNHLIKKHKEKPFSCKKCTAVFRSYNQYMHHVETTHKYGRAFCGDCGRSFQSLNAYHAHVSIHVSKNCPSCDKLFRNHSCYMHHTKNCCELYSKKKIMKKKKNVTIEINNAKNNRKINIGHRGATCKECICDYCGKTFARKKFICAHIQIVHMRNTHRPCIYCGKLLASAHMSEHMKQHKPDCTYTCEQCGIILKTKLGYNQHIRLHTGERPYECKQCGETFSASSRRSEHIRKVHKTKDIILKQQCHLCPAKFRLPYRLKRHLRSVHNDDQDQTPQFECTVVDETDFPAALCCACANNAISAWQFRHLCHESHNHWTKITEALMIPENPTKQDKTFYITCNGTVFNDYVAVSQSREDAIKRLNFLSGAKHKIRAKYKKKCSKKSVNKYKCKDCGKQFEVPYFLNRHLLNSSVRACTLCGKVVSKEKLPVHLERSHQLMVEFCDICYKLFDDRLLLDRHKQILHADSSLQCNTCRNGFKNDRSLRAHMYTHTLFNCSLCNSSFENRKCYLHHRNNCQGSKCTNQYIYECNDCGSKYTKKPSLRVHIVQKHLNVLPYICQICGKRSSSKTHHKSHELVHKTERKIYQCFCGAKMRTVHGFQMHQRIHSGEKPYECQECGDRFLSASRRLDHIKRKHRRKNLGCDECDARFVRPSELKKHWRTAHHVQEDQLFPRGLCVSCTRVAVSASEFRIFVTKSQRLWSNCIDSLHTLPTLNTSQKSLYAIVRENLLLQTVNHFEGNAKDLLEHLTNRIVKRKNLLVERKPRHPRTGPACSCTDCGKSFLSPYYLNMHLRNSGQKEACWLCGAMLTRGQEMKEHLRKIHKTEMFICSECPLLFKTDVDRKRHAKKNHGPGVMTCADCGRTFQRSASFDVHTQMHTVRTCRSCGAQFTNRGCYRAHRSKCEPDAKPDLKTIPRNRRSNIRDPATFTCDYCGKTYHSRPQLKNHILWIHMDIRPHQCQWCGKRFYTPARLAEHSVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGERPYECPDCGEKFISSSRRTEHAKRRHNKGSRIHCSECLASFVRNHELKKHMDKVHNNENHVVVKIKKENKEYHMKAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00781193;
90% Identity: iTF_00781193;
80% Identity: -