Hnum028535.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliconius numata
Gene Symbol
-
Assembly
GCA_016802625.1
Location
JAEBDU010000038.1:450877-456676[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 0.043 4.3 8.7 0.9 2 23 60 81 59 81 0.95
2 36 0.026 2.6 9.4 0.0 2 23 109 131 108 131 0.94
3 36 0.057 5.8 8.3 0.6 2 23 152 174 151 174 0.93
4 36 0.00048 0.049 14.8 1.3 3 23 181 202 179 202 0.95
5 36 0.0047 0.47 11.7 3.0 1 23 206 229 206 229 0.96
6 36 0.00016 0.016 16.3 2.9 1 23 330 353 330 353 0.93
7 36 0.0057 0.58 11.4 0.8 2 23 381 403 380 403 0.95
8 36 5.8e-05 0.0059 17.7 0.5 1 23 425 448 425 448 0.93
9 36 4.5e-05 0.0046 18.1 2.8 3 23 455 475 454 476 0.94
10 36 0.00011 0.012 16.8 1.7 1 23 482 505 482 505 0.95
11 36 1.8e-05 0.0018 19.3 1.6 1 23 510 533 510 533 0.96
12 36 0.066 6.7 8.1 4.4 1 23 537 560 537 560 0.96
13 36 0.11 11 7.4 3.6 2 23 567 588 566 588 0.96
14 36 0.35 36 5.8 0.3 1 23 636 658 636 658 0.94
15 36 0.014 1.4 10.2 1.9 1 23 744 767 744 767 0.94
16 36 1.5 1.5e+02 3.8 1.6 2 23 795 817 794 817 0.93
17 36 0.059 6 8.3 0.2 1 23 839 862 839 862 0.92
18 36 6.9e-05 0.0069 17.5 1.6 3 23 869 889 868 890 0.94
19 36 0.00032 0.033 15.4 1.2 1 23 895 918 895 918 0.95
20 36 0.004 0.4 11.9 2.9 2 23 924 946 923 946 0.92
21 36 0.012 1.2 10.4 2.0 1 20 950 969 950 971 0.94
22 36 0.011 1.1 10.6 2.3 1 23 1004 1026 1004 1026 0.97
23 36 0.005 0.5 11.6 0.7 2 23 1097 1119 1096 1119 0.95
24 36 2.9e-05 0.0029 18.7 0.4 3 23 1126 1147 1124 1147 0.96
25 36 0.1 10 7.5 0.8 1 23 1152 1175 1152 1175 0.95
26 36 0.0033 0.33 12.2 2.4 2 21 1178 1197 1178 1200 0.95
27 36 0.043 4.3 8.7 1.3 3 20 1205 1222 1203 1224 0.92
28 36 0.0042 0.42 11.9 0.4 1 23 1275 1298 1275 1298 0.92
29 36 1.2 1.2e+02 4.1 0.1 2 23 1326 1348 1325 1348 0.95
30 36 0.00033 0.033 15.4 0.1 2 23 1371 1393 1370 1393 0.96
31 36 7.7e-05 0.0078 17.3 0.2 3 23 1400 1421 1399 1421 0.94
32 36 0.071 7.1 8.0 3.0 2 23 1426 1448 1425 1448 0.93
33 36 0.012 1.2 10.4 5.0 1 23 1453 1476 1453 1476 0.97
34 36 8e-06 0.00081 20.4 5.0 1 23 1480 1503 1480 1503 0.97
35 36 0.0017 0.17 13.1 0.2 2 23 1510 1531 1509 1531 0.95
36 36 1.8e-05 0.0018 19.4 0.3 1 23 1537 1559 1537 1559 0.98

Sequence Information

Coding Sequence
ATGTTTAGGCTAATTGATCATTTATACGTCTTTAAGGGTACATTTTACAACCCGGAAAATTTATTTTCAGATATAATACCATCAAAGGTGCCTAATTCTAATACATTGAGGCGGCGAAATCTTCTTATTTTGTTCAACAACACATCCATAATTCCTTTCAAGTATCGAGGGAAATGTAGGTGCTTTTATTGCGGAGAGGAATTGCCCGAATATGCTGATTTGCGTAAACACACTAAAGCCCACGGTCCGTGCTTCGAAAACGATCGTGCTATACGATTAGTTAAAACTGATGACGCAGAAGTAAAAGTTGATATATCAAATATTGTTTGTGAAATATGCAACGAACCTTTTGCTACTTTTGATGAAATAATATCTCATTTGATTATAAAACACTCATTTTGTTACGACAAAGACGTCAAACTTACAATAATGACATACCGTCTTATAGATTTACAGTGTCTTTTATGCGATCAGAAGTTTAATCAAGTCAATGAATTAGTTGCACACGCTAATCATAAACATCCAATTCAAAGTCTAGATTGTCAAATTTGTCATCAAAAATTTATCAGAAAACCATATTTAGATGCTCACATGAGACTAAAACATAAGAATAACTACAAATGTTTAAAATGCTCCCAAATGTTTATATCGCACTCCGCTCTTCAGGAACATAAAAGCAAATCGCATGTTGCTGTTTGTAACATTTGTTTTCTGAAATTCTCTTGTCAAAAGAAAAGATTAAAGCATATGAAGTTAGAGCACGTGAATGAACCGCTCAAATGTGGCTTCTGTCTCAAATCTATGAACACAAAGTTAGGATTTTTAAGACACGCCGCTAAATGTACAGAACGCGGCATGAATGGAGACGATATTTATATAATAGACGATGACGATGACAAGAAACCAGCTGTAATTCAAATCAGAAATAATATTGCCTGCATACTTAACATGTCTACAGCTATACCTTTTAAATATTTTATGAATAGATTTAGATGTTTCTACTGCCCAAAAAATTTCACGGATTGTGAAGAGCTTAAAAAACACACAGTAATAGAACATCCCGTTTGTGATATTGATTTTAAATGCATGAGATTACGAAACAGACAGGAAGGGTGTGTTAAAATTGATATATCAACGCTTTCTTGCAAAATGTGTCATAAAAAAATATCTAATTTAGATTCTTTAATTGATCACTTGATTTCTGAGCACAAAGTGTTTTACGATAGATACATAGACAGTAATATGCAAACTTACAAGTTAATAAAAAATAATTATCCCTGTCCAATTTGTAAGGAAGTTTATACACACTTCAGTACGCTGTTGAGGCATATGGGCCAAATACATACGGATAATAATAATATTTGTATGCATTGTGGAAAATCATTTCGAAATTTGCCAAATTTAAGAGTACACATTTCCAACCATCATAAAACAACGGGCACGTATAAATGTAATCGATGTGACCAAGAATTTTCCTCGAACAAGTATTTGCAAACGCATTTGGGTCGCTTACACGCAGTCAAAGTGTTTGAATGTCCGAAGTGTAAAGAAAAATTCACATCGAACTACACAATGCAAAGGCACATGATTAATATGCACAGTACGGGACATAAGTGCGCATACTGCGGTAAACTGTTCACCTCCAATTGTTTTATGTTAGATCACGTGAAACGCATTCACTTGAAAGAAAGAAACGTCGAGTGTCATATCTGCTATGAGAATTTCTTTAATATTCAATGTTTAAAAACTCATATGGTTAAGCACAACGGTGCGAGAAACTTTCATTGTGATGTTTGTGATGAAAACATCCCATCCAAGTTACATAGTGCCAATAGATTAAGAAGGTTAAATCTAAAAATATTATTTAACAATACCTCAATATTACCATTTAAATGGCGTGGTAAATACATGTGCTTTTACTGTGGGGAAACCCCAAAAACATATGAGAAGTTAGTAGTTCACACTGAAGAACATGGACAATGTTCAGAAAAAGATCGAGCATTACAGTTAATAAAGGCGGCAGATGTTGAAGTGAAAGTTGATACGTCTAATATACTATTGAAGAAATCTTTTGTAAAACACGTAATAGAATGCACTGAAAGCATTGAGATGCCCACACACGACATACAAATCATAAACAAAAATCCAAAAGTGAAGCAAATTAGATATAACATGTCATGTATTTTTAACATGTCTACAGCGATGCCGTTTAAATATTTTATGAGCAGATTTAGGTGTTTTTATTGCCCTAAAGACTTTCAGGAGTGTGATGATCTCAAAGAACACACAATATTAGAGCATCCGTTATGTGATATAAAATTAAAATCTATGAAATTACGCCATAGACAAGATGGTTTAATCAAAGTGGACATTTCGACACTGTCCTGCAAAATATGTTTTCAAAAGTTACAAGATTTAAATACATTGATACATCATTTGAATTTTGAACATAAAATACAGTGTGATAGTTCTGCTACTGTTAACTTGCAGGCATACAAATTAATAAAAGATAATTTCCCATGTCCAGTTTGCGTGGAAGTATTTCGTTATTTTCGAACATTATTGTACCACGTCGGTAAAAGTCACTCTGATAATAAAAATATATGTGTACATTGTGGACTAGCTTTTCGAAATTCACCCAATTTACGTGCACATATAACTCGTCACCATAAATTGGCCAGCTTTAAATGCTCGGAATGCGATATGCGATTTTTTACAAATAATTACTTGCAATCACATTTAGGTCGAGCACACGGCACTAAAATAGTGAAGTGCCACGAATGTAAAGAAAGATTTAAATCTACCTACGAAATGCAAAGGCATAAAATAGAAACACATGGTTCTGGACACGAATGTTCTTATTGTCACAAATTATTCACTGGGAAGTCAGCAGTTAACAATCACATACATGAAGTCCCGTACGACGTCTGCCCCTCTGAGCGCAGACGAAAAAACTTGCAAATACTGTTCAACAACACAACAGTAATACCTTTTAAATGGCGGGGGAGGTATATTTGCTTTTATTGCGGTCAAAATTATAATGAATACCAATCCTTCAGAAAACATACGAGAGCTCACGGTCTTTGTAGTACAAGTGATCATGCCTTGAAGCTTATTAAAGGAAGTCATATAGAAATTAAGATAGACGTTTCAGAGATAGCATGTGAAATTTGTTACCAGCCTTTAACTAGTATTGATGAAGTTGTAGAACATTTGATAAATAAACACGAGTTAGAATACGATAGAAGTATAGATATACCTATACAGGAGTATCAGCTTTCAGATTGTCGGTGTCGAATATGTGGTCAAGAATTTCCTTATTTTGGCTACTTAATACAACATACTAATATAGTCCATCCCCAAAATACCGTTATTTGTGATAATTGTGGTGAAAAATTCAACAAAAAACGAGATCTGGCCATTCATATGAGACGCTATCACCAAGAAGGTGGATACCCTTGTGATGAGTGTCCAGATTTTTTTGAATCCTACACACTTTTAAGTAAACATAAGAATAATTTTCACTTTAGAAGATGCAAAATATGTGATTTACGCTTTCCGTCCTACACTCTTTTAAGGAGACATATAAAATGTGATCATTCTGATGATAACTGTCCGTATTGCTCAAAAAAATGTCAAACTTCTCAAGGACTTAAACAGCACGTTATAAAGTGCAGTAAAAGATGTCATGTAAAAGTAAAACAAGCCTTCGATGAAGAAATAATACAACCTAACAAGAAAAAGAATGTTAACCAAATAAGAAAAAATATACTGTGTGTTCTGAACATGTCTACTGCAGTACCTTTTAAGTTCTTCACGAAATATTCTTGCTTTTACTGTTCTAAAAGTTATGTGGAATTCGATGATCTCAAACAACATGTAATAGCAGCGCATCCAACTTGTGATCTGAATCAAAAATGTATGAAAAATTGTAAAGGGGAAAGAATATCGGTTAAAGTCGACATATCGTCGTTATCGTGTAGAGTGTGCTTTGAATCCATAGATAATATAGATTCTTTAATAGACCATCTTATAACTAAGCATGGAGCTGAATACGACAAAGCAACAACCGGATGTTTCGAATCATTTAAAATAGTCAAAGATAATATTCCTTGTCCAATATGTTTTACTGTTTTTAGATATTTTGGGTCCCTTCTAAGGCATATCAATTCTGAACATAGTAATAATAACAGAATTTGTGATTTTTGTGGTCGTAGCTTCAAAAACGTGGCTAATTTAAAGGTGCATATAACTTATGCGCATACCGGTTCGTGCGAGTGTGACGTTTGCGGCGTAAAGTATAAAAATCAATGGTGCTTAGGTCGACACAAAGCGAAATCTCACAACGCTAAAGATTTCCAATGTACGAAATGTTCAGAGCGGTTCCAATCACAATATCATAAACAAAAACATCTAATTAAAGTCCATGATATAGGTCATAAATGTTCGTACTGTGGAAAAATGTTCACACGAAATTCTTTTATGAAAGACCACATACGTAGGACTCACTTGAAAGAGAAAAATGTGCCCTGTGCAGTTTGTAATGAAAAGTTTTTTGATAATTATCTATTAAGGCTTCATATGGTAAAGCATAAAGGCGAAAGAAAGTTCACTTGTGAGATATGTGGTAAAGCGTTTTTGAGGCGCAGTAATTTAAGCGCTCACACAGAAATGCATAAAAAATATGGCCATGTTTAA
Protein Sequence
MFRLIDHLYVFKGTFYNPENLFSDIIPSKVPNSNTLRRRNLLILFNNTSIIPFKYRGKCRCFYCGEELPEYADLRKHTKAHGPCFENDRAIRLVKTDDAEVKVDISNIVCEICNEPFATFDEIISHLIIKHSFCYDKDVKLTIMTYRLIDLQCLLCDQKFNQVNELVAHANHKHPIQSLDCQICHQKFIRKPYLDAHMRLKHKNNYKCLKCSQMFISHSALQEHKSKSHVAVCNICFLKFSCQKKRLKHMKLEHVNEPLKCGFCLKSMNTKLGFLRHAAKCTERGMNGDDIYIIDDDDDKKPAVIQIRNNIACILNMSTAIPFKYFMNRFRCFYCPKNFTDCEELKKHTVIEHPVCDIDFKCMRLRNRQEGCVKIDISTLSCKMCHKKISNLDSLIDHLISEHKVFYDRYIDSNMQTYKLIKNNYPCPICKEVYTHFSTLLRHMGQIHTDNNNICMHCGKSFRNLPNLRVHISNHHKTTGTYKCNRCDQEFSSNKYLQTHLGRLHAVKVFECPKCKEKFTSNYTMQRHMINMHSTGHKCAYCGKLFTSNCFMLDHVKRIHLKERNVECHICYENFFNIQCLKTHMVKHNGARNFHCDVCDENIPSKLHSANRLRRLNLKILFNNTSILPFKWRGKYMCFYCGETPKTYEKLVVHTEEHGQCSEKDRALQLIKAADVEVKVDTSNILLKKSFVKHVIECTESIEMPTHDIQIINKNPKVKQIRYNMSCIFNMSTAMPFKYFMSRFRCFYCPKDFQECDDLKEHTILEHPLCDIKLKSMKLRHRQDGLIKVDISTLSCKICFQKLQDLNTLIHHLNFEHKIQCDSSATVNLQAYKLIKDNFPCPVCVEVFRYFRTLLYHVGKSHSDNKNICVHCGLAFRNSPNLRAHITRHHKLASFKCSECDMRFFTNNYLQSHLGRAHGTKIVKCHECKERFKSTYEMQRHKIETHGSGHECSYCHKLFTGKSAVNNHIHEVPYDVCPSERRRKNLQILFNNTTVIPFKWRGRYICFYCGQNYNEYQSFRKHTRAHGLCSTSDHALKLIKGSHIEIKIDVSEIACEICYQPLTSIDEVVEHLINKHELEYDRSIDIPIQEYQLSDCRCRICGQEFPYFGYLIQHTNIVHPQNTVICDNCGEKFNKKRDLAIHMRRYHQEGGYPCDECPDFFESYTLLSKHKNNFHFRRCKICDLRFPSYTLLRRHIKCDHSDDNCPYCSKKCQTSQGLKQHVIKCSKRCHVKVKQAFDEEIIQPNKKKNVNQIRKNILCVLNMSTAVPFKFFTKYSCFYCSKSYVEFDDLKQHVIAAHPTCDLNQKCMKNCKGERISVKVDISSLSCRVCFESIDNIDSLIDHLITKHGAEYDKATTGCFESFKIVKDNIPCPICFTVFRYFGSLLRHINSEHSNNNRICDFCGRSFKNVANLKVHITYAHTGSCECDVCGVKYKNQWCLGRHKAKSHNAKDFQCTKCSERFQSQYHKQKHLIKVHDIGHKCSYCGKMFTRNSFMKDHIRRTHLKEKNVPCAVCNEKFFDNYLLRLHMVKHKGERKFTCEICGKAFLRRSNLSAHTEMHKKYGHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00778165;
90% Identity
iTF_00778165;
80% Identity
-