Basic Information

Insect: Heliconius hermathena
Gene Symbol: -
Assembly: GCA_013403705.1
Location: JAAIXJ010000114.1:573014-578786[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 35 0.0025 0.17 12.6 0.2 1 23 23 45 23 45 0.97

2 35 0.015 1.1 10.1 0.0 2 23 73 95 72 95 0.96

3 35 0.15 11 6.9 1.1 2 23 116 138 115 138 0.93

4 35 0.00045 0.032 14.9 1.3 3 23 145 166 143 166 0.95

5 35 0.24 17 6.3 3.0 1 23 170 193 170 193 0.96

6 35 0.001 0.072 13.7 3.9 1 23 292 314 292 315 0.95

7 35 0.048 3.4 8.5 0.4 2 23 343 365 342 365 0.94

8 35 7.4e-05 0.0052 17.3 0.3 1 23 387 410 387 410 0.93

9 35 4.3e-05 0.003 18.1 2.8 3 23 417 437 416 438 0.94

10 35 0.00016 0.011 16.3 1.7 1 23 444 467 444 467 0.95

11 35 1.3e-05 0.00094 19.7 1.3 1 23 472 495 472 495 0.96

12 35 3.8 2.7e+02 2.5 5.4 1 23 499 522 499 522 0.94

13 35 0.096 6.8 7.5 3.1 2 23 529 550 528 550 0.96

14 35 0.33 23 5.9 0.3 1 23 598 620 598 620 0.94

15 35 0.033 2.4 9.0 4.2 1 23 706 729 706 729 0.94

16 35 0.3 21 6.0 1.4 1 23 801 824 801 824 0.93

17 35 6.4e-05 0.0045 17.5 1.6 3 23 831 851 830 852 0.94

18 35 0.00039 0.027 15.1 1.2 1 23 857 880 857 880 0.95

19 35 0.0036 0.25 12.0 4.1 2 23 886 908 885 908 0.95

20 35 0.011 0.79 10.5 2.0 1 20 912 931 912 933 0.94

21 35 0.015 1.1 10.1 3.2 1 23 966 988 966 988 0.98

22 35 0.002 0.14 12.9 1.2 2 23 1059 1081 1058 1081 0.95

23 35 2.1e-05 0.0015 19.1 0.6 1 23 1086 1109 1086 1109 0.97

24 35 0.57 40 5.1 0.8 1 23 1114 1137 1114 1137 0.95

25 35 0.0031 0.22 12.2 2.4 2 21 1140 1159 1140 1162 0.95

26 35 0.021 1.5 9.6 1.6 3 21 1167 1185 1165 1186 0.93

27 35 0.0078 0.55 11.0 0.6 1 22 1237 1258 1237 1260 0.90

28 35 2.6 1.8e+02 3.0 0.0 2 23 1288 1310 1287 1310 0.93

29 35 0.00042 0.029 15.0 0.1 2 23 1333 1355 1332 1355 0.96

30 35 7.2e-05 0.0051 17.4 0.2 3 23 1362 1383 1361 1383 0.94

31 35 0.066 4.7 8.1 3.0 2 23 1388 1410 1387 1410 0.93

32 35 0.011 0.79 10.5 5.0 1 23 1415 1438 1415 1438 0.97

33 35 4e-06 0.00028 21.3 4.1 1 23 1442 1465 1442 1465 0.97

34 35 0.00049 0.034 14.8 0.3 2 23 1472 1493 1471 1493 0.96

35 35 4.7e-05 0.0033 18.0 0.3 1 23 1499 1521 1499 1521 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	35	0.0025	0.17	12.6	0.2	1	23	23	45	23	45	0.97
2	35	0.015	1.1	10.1	0.0	2	23	73	95	72	95	0.96
3	35	0.15	11	6.9	1.1	2	23	116	138	115	138	0.93
4	35	0.00045	0.032	14.9	1.3	3	23	145	166	143	166	0.95
5	35	0.24	17	6.3	3.0	1	23	170	193	170	193	0.96
6	35	0.001	0.072	13.7	3.9	1	23	292	314	292	315	0.95
7	35	0.048	3.4	8.5	0.4	2	23	343	365	342	365	0.94
8	35	7.4e-05	0.0052	17.3	0.3	1	23	387	410	387	410	0.93
9	35	4.3e-05	0.003	18.1	2.8	3	23	417	437	416	438	0.94
10	35	0.00016	0.011	16.3	1.7	1	23	444	467	444	467	0.95
11	35	1.3e-05	0.00094	19.7	1.3	1	23	472	495	472	495	0.96
12	35	3.8	2.7e+02	2.5	5.4	1	23	499	522	499	522	0.94
13	35	0.096	6.8	7.5	3.1	2	23	529	550	528	550	0.96
14	35	0.33	23	5.9	0.3	1	23	598	620	598	620	0.94
15	35	0.033	2.4	9.0	4.2	1	23	706	729	706	729	0.94
16	35	0.3	21	6.0	1.4	1	23	801	824	801	824	0.93
17	35	6.4e-05	0.0045	17.5	1.6	3	23	831	851	830	852	0.94
18	35	0.00039	0.027	15.1	1.2	1	23	857	880	857	880	0.95
19	35	0.0036	0.25	12.0	4.1	2	23	886	908	885	908	0.95
20	35	0.011	0.79	10.5	2.0	1	20	912	931	912	933	0.94
21	35	0.015	1.1	10.1	3.2	1	23	966	988	966	988	0.98
22	35	0.002	0.14	12.9	1.2	2	23	1059	1081	1058	1081	0.95
23	35	2.1e-05	0.0015	19.1	0.6	1	23	1086	1109	1086	1109	0.97
24	35	0.57	40	5.1	0.8	1	23	1114	1137	1114	1137	0.95
25	35	0.0031	0.22	12.2	2.4	2	21	1140	1159	1140	1162	0.95
26	35	0.021	1.5	9.6	1.6	3	21	1167	1185	1165	1186	0.93
27	35	0.0078	0.55	11.0	0.6	1	22	1237	1258	1237	1260	0.90
28	35	2.6	1.8e+02	3.0	0.0	2	23	1288	1310	1287	1310	0.93
29	35	0.00042	0.029	15.0	0.1	2	23	1333	1355	1332	1355	0.96
30	35	7.2e-05	0.0051	17.4	0.2	3	23	1362	1383	1361	1383	0.94
31	35	0.066	4.7	8.1	3.0	2	23	1388	1410	1387	1410	0.93
32	35	0.011	0.79	10.5	5.0	1	23	1415	1438	1415	1438	0.97
33	35	4e-06	0.00028	21.3	4.1	1	23	1442	1465	1442	1465	0.97
34	35	0.00049	0.034	14.8	0.3	2	23	1472	1493	1471	1493	0.96
35	35	4.7e-05	0.0033	18.0	0.3	1	23	1499	1521	1499	1521	0.97

Sequence Information

Coding Sequence: ATGTTTAGGCAAATTGATCGTTTATACGTCATTAAGGGTACATTTTACAACCATGAAAAATTTCTTTTCAGGTGCTTTTATTGTGGAGAGGTATTGCCCGTATATGCTGATTTACGTAAGCACACTAAAGCACACGGTCCGTGCTTCGAAGACGATCGTGCTATACGATTAGTTAAAACTGATGACGCAGAAGTAAAAGTTGatatatcaaatattgtttGTGAAATATGCAACGAACCTTTTGCTACTTTTGAAGAAATAATATCCCATTTGATTACAAAACACTCTTTTTCTTACGACAAAGACGTCAAACTTACAATAATAACATACCGTCTTATAGATTTGCAGTGTCTTTCATGCAATCAAAAGTTCAATCAAGTCAATGAATTAGTTGCACACGTTAATCATAAACATCCAATTCAAAGTCTAGATTGTCAAATTTGTCATCAAAAATTTATCAGAAAACCATATTTAGATGCTCACATGAGACTTAAACATAAGGATAACTACAAATGTTTAAAATGCTCCCAAATGTTTCTATCCCACTCTTCGCTTGaggaacataaaattaaatcgcATGTTGCTATTTGTAACATTTGTTTTCTGAAATTTTCATGTCAAAAGAAAAGATTAAAGCATATGAAGTTAGAGCACGCGAATGAACCGCTCAAATGTGGTTTCTGTCTTAAATCTATGAACACGAAATTAGGATTTTTAAGACACGCCGCTAAATGTACAGAACACGGAATGCATGGAGACGATACGTATATAATAGACGACGATAAGAAACCAGCTGTAATtcaaattagaaataatattgcATGCATACTTAACATGTCTACAGCTataccatttaaatattttatgaatagatTTAGATGTTTCTACTGCCCTAAAGATTTCACGGATTGTGAAGAGCTTAAAGAACACACAGTAATACATCATCCCGTTTGTGATATTGATTTTAAGTGTATGAGATTACGAAACAGACAGGAAGGTTgtgttaaaattgatatttcaacGCTTTCTTGCAAAAtgtgttataaaaaattatcgaatttagAGTCTTTTATTGATCACTTGATATCTGAGCACAAAGTGTTTTACGATAAATCCATAGACAGTAATATGCAATCTTACAagttaataaaagataattatcCCTGTCCAATTTGTGAAGAGGTTTATACACATTTCAGTACTCTATTGAGGCATATGGGTCAAATTCATACggataataagaatatttgtaTGCATTGTGGAAAATCGTTTAGAAATTTGCCAAATTTAAGAGTACATATTTCCAACCATCATAAAACAACGGGCACGTATAAATGTAGTCGATGTGACCAAGAATTTTCTTCGAATAAGTATTTACAAACGCATTTGGGTCGCTTACACGCAATGAAAGTGTTTGAATGTCCGAAGTGTAAAGAAAAATTCACATCGAACTACACAATGCAAAGACATATGATTAATGTGCACAGTTCGGGACATAAGTGCATCTACTGCGGTAAACTATTCACCTCCAATTGTTTTATGTTAGATCACGTGAAACGCACTCACTTGAAAGAAAAACATGTCGAGTGTCATATCTGCTATGAGaatttttttgatattcaaTGTTTAAAAACTCATATGGTTAAGCACAACGGTGAGAGAAACTTTCATTGTGATGTCTGTGATGAAAACATCCCATCCAAGTTGCATAGTGCCAATAGATTAAGAagattaaatctaaaaatattattcaacaaTACCTCGATACTACCATTTAAATGGCGTGGTAAATACATGTGTTTTTACTGTGGGGAAACCCCAAAAACATATGAGAAGTTAGTAGTTCATACTGAAGAACATGGCCAATGTTCAGAAAAAGATCGAGCGTTACAGTTAATAAAGGCGGCAGACGTTGAAGTGAAAattgatacgtctaatatactATATAAGAAATCTTTTGTTAAACACGTAACAGAATGCACAGAAAACATTAAGATGCCTACACACAACATACaaattataagcaaaaattCAAAAGTGAAGCAAATTAGAAATAACATGGcatgtatttttaacatgtcTACAGCGATgccgtttaaatattttatgagcaGATTTAGGTGTTTTTATTGCCCTAAAGACTTTCATGAGTGTGATGATCTCAAACAACACACAATATTAGAGCATCCGTTATgtgatacaaaattaaaatctatgaaATTACGCCATAGACAAGATGGTTTAATCAAAGTGGACGTTTCGACACTGTcctgtaaaatatgttttcaaaagttacaagatttaaatatattgatacatCATTTAAACATTGAACATAAAATACAGTGTGATAGTTCTGCTACTGTTAACTTGCAGgcatacaaattaataaaagataatttccCATGCCCATTTTGCATGGAAGTATTTCGTTATTTTCGATCATTATTACATCATGTAGGTAAAAGTCActctgataataaaaatatatgtgtacatTGTGGACTAGCTTTCCGAAATTCACCCAATTTACGTGCACATATAACTCGACACCATAAATTGGCCAGTTTTAAATGCTCGGTGTGCGATATgcgattttttacaaataactaCTTGCAAACACATTTAGGTCGAGCACACGGCACTAAAATAGTGAAGTGCCACGAATGTAAAGAAAGATTTAAATCTACCTACGAAATGCAAAGGCATAAGATAAAAACACATGGTTCTGGACACGAATGTTCCTATTGTCACAAATTATTCACTGGGAAGTCTGCAGTTAACAATCACATACATGAAGTCCCGTACGATGTCTGCCCCTCTGAGCGCAGACGAAAAAACTTGCAAATACTGTTCAACAACACAACAATAATACCTTTTAAATGGCGGGGGaggtatatttgtttttattgcggtcaaaattataatgaatatcaATCGTTCAGAAAACATACGAAATCTCATGGTCTTTGTAGTACAAGTGATTATGCCTTGAAACTTATTAAAGGAAGTTATATTGAAGTTAAGATAGACGTTTCAGAGATAGCATGTGACATTTGTTTCGAGCCGTTAACTTGTTTTGATGAGGTTGTAGATCATTTGACAAATAAACATGAGTTGGAATACGATAAGAGTATAGATATACCTATACAGGAGTATCAGCTTTCAGATTGTCGATGTCGGATATGTGGTCaagaatttacttattttggCTACTTAATACAACATACTAATATAGCTCATCCCCAAAATACCTTTATTTGTGACAATTGTGGtgaaaaattcaacaaaaaacgAGATCTGGCCATACATATAAGACGCTATCACCAAGAAGGCGGATATCCTTGCGATGAGTGTTCAGATTTTTTTGAATCCTACATACTTTTAAGTAAACATaagaataattttcactttagaagaTGCAAAATATGTGATTTACGTTTCCCATCCTACACTCTTTTAAGAAGACATATAAAATGTGATCATCCTGATGATAACTGTCCGTATTGCTCAAAAAAATGTCAAACTTCTCAAGGCCTTAAACAGCATATTACAAAGTGCAGTAAAAGATGTggtataaaagtaaaacaagCCTTCGATGAAGAAATTATACAACCTAACAAGAAAAAGAATGTTaaccaaataagaaaaaatatactgtgTGTTCTGAATATGTCTACAGCAGTACCATTTAAATTCTTCACGAAATATTCTTGCTTTTACTGTTCTAAAAGTTATGTGGAATTTGATGACCTCAAACAACATGTAGTAGAGGAGCATCCAACTTGTGATCTGaaagaaaaatgtatgaaaaattgtAAAGGGGAAAGGATATCGGTTAAAATCGACATATCATCATTATCGTGTAGAGTGTGCTTTGAATCCATAGATAATGTAGATTCTTTAATAGATCATCTTATAATTAAACATGGAGCTGAATACGATAAAGCAACAACCGGATGTTTTGAAtcgtttaaaataatcaaagatAGTATTCCTTGCCCAATATGTTCtactatttttagatatttcggGTCCCTTCTAAGACATATCAATTCTGAACATAGTAATAATAACAGAATTTGCGATTTTTGCGGTCGTAGCTTCAAAAACGTGGCTAATTTAAAGGTGCATATAACTTATGCGCATACTGGTTCGTGCGAGTGTGACGTTTGCGGcgtaaagtataaaaatcaaTGGTGCTTAGGTCGACACAAAGCGAAATCTCACAACGCTAAAGATTTCCAATGTACGAAGTGTTCAGAGCGGTTCCAATCACAAtatcataaacaaaaacatCTAATTAAAGTCCATGACATAGGTCATAAATGTTCGTACTGTGGGAAAATGTTTACGCGAAATTCTTTTATGAAAGACCACATACGTAGGATTCACTTGAAAGAGAAAAATGTGCCCTGTACAGTTTGCAATGAaaaattttttgataattatctATTAAGGCTTCATATGGTGAAGCATAAAGGCGAAAGAAAGTTCAGTTgtgaggtatgtggtaaagcgTTTTTGAGGCGCAGTAATTTAAGCGCTCACACagaaatgcataaaaaatatgGCCATGTTTAA
Protein Sequence: MFRQIDRLYVIKGTFYNHEKFLFRCFYCGEVLPVYADLRKHTKAHGPCFEDDRAIRLVKTDDAEVKVDISNIVCEICNEPFATFEEIISHLITKHSFSYDKDVKLTIITYRLIDLQCLSCNQKFNQVNELVAHVNHKHPIQSLDCQICHQKFIRKPYLDAHMRLKHKDNYKCLKCSQMFLSHSSLEEHKIKSHVAICNICFLKFSCQKKRLKHMKLEHANEPLKCGFCLKSMNTKLGFLRHAAKCTEHGMHGDDTYIIDDDKKPAVIQIRNNIACILNMSTAIPFKYFMNRFRCFYCPKDFTDCEELKEHTVIHHPVCDIDFKCMRLRNRQEGCVKIDISTLSCKMCYKKLSNLESFIDHLISEHKVFYDKSIDSNMQSYKLIKDNYPCPICEEVYTHFSTLLRHMGQIHTDNKNICMHCGKSFRNLPNLRVHISNHHKTTGTYKCSRCDQEFSSNKYLQTHLGRLHAMKVFECPKCKEKFTSNYTMQRHMINVHSSGHKCIYCGKLFTSNCFMLDHVKRTHLKEKHVECHICYENFFDIQCLKTHMVKHNGERNFHCDVCDENIPSKLHSANRLRRLNLKILFNNTSILPFKWRGKYMCFYCGETPKTYEKLVVHTEEHGQCSEKDRALQLIKAADVEVKIDTSNILYKKSFVKHVTECTENIKMPTHNIQIISKNSKVKQIRNNMACIFNMSTAMPFKYFMSRFRCFYCPKDFHECDDLKQHTILEHPLCDTKLKSMKLRHRQDGLIKVDVSTLSCKICFQKLQDLNILIHHLNIEHKIQCDSSATVNLQAYKLIKDNFPCPFCMEVFRYFRSLLHHVGKSHSDNKNICVHCGLAFRNSPNLRAHITRHHKLASFKCSVCDMRFFTNNYLQTHLGRAHGTKIVKCHECKERFKSTYEMQRHKIKTHGSGHECSYCHKLFTGKSAVNNHIHEVPYDVCPSERRRKNLQILFNNTTIIPFKWRGRYICFYCGQNYNEYQSFRKHTKSHGLCSTSDYALKLIKGSYIEVKIDVSEIACDICFEPLTCFDEVVDHLTNKHELEYDKSIDIPIQEYQLSDCRCRICGQEFTYFGYLIQHTNIAHPQNTFICDNCGEKFNKKRDLAIHIRRYHQEGGYPCDECSDFFESYILLSKHKNNFHFRRCKICDLRFPSYTLLRRHIKCDHPDDNCPYCSKKCQTSQGLKQHITKCSKRCGIKVKQAFDEEIIQPNKKKNVNQIRKNILCVLNMSTAVPFKFFTKYSCFYCSKSYVEFDDLKQHVVEEHPTCDLKEKCMKNCKGERISVKIDISSLSCRVCFESIDNVDSLIDHLIIKHGAEYDKATTGCFESFKIIKDSIPCPICSTIFRYFGSLLRHINSEHSNNNRICDFCGRSFKNVANLKVHITYAHTGSCECDVCGVKYKNQWCLGRHKAKSHNAKDFQCTKCSERFQSQYHKQKHLIKVHDIGHKCSYCGKMFTRNSFMKDHIRRIHLKEKNVPCTVCNEKFFDNYLLRLHMVKHKGERKFSCEVCGKAFLRRSNLSAHTEMHKKYGHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00781993;
90% Identity: iTF_00781993;
80% Identity: -