Basic Information

Gene Symbol
-
Assembly
GCA_016802625.1
Location
JAEBDU010011066.1:906-2886[+]

Transcription Factor Domain

TF Family
PC4
Domain
PC4 domain
PFAM
PF02229
TF Group
Unclassified Structure
Description
This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-15 4.6e-11 42.8 0.0 2 50 464 510 463 512 0.94

Sequence Information

Coding Sequence
ATGGATCATGAACAACTTCATTTTTCAGAGTATAAGCGATTTTTACAAGATGTTGAGAAAAGTTACCTACTTTTTCCATTTCATGCAACACATTCAAAAGCGCGCACTGAGTTCAAGAAAAATGTCATGCAAGGAAATGGACTAGGATATGTACTGTACCATGAAAAAGTCCCTGTTATGTTTTTGGTGATTCAAAAAGATGTTATCGTGAATTTACTATTGAAAAAAGATACTGGTCTTCATTTGAAACAAATTCTTAGTGAAATTGAAAAAATTTATAAAGCTCTTTTCAAAAAATATGTGCGATTTCAGTTTCAGACCATGCTACCTCTTCCACTAGAAGAACAATTTATAAAATTAGGCTATAGATTCAAAACACCGACTACTTTGCAAAAGAGACTTTCTTATAATACGGCATTGGTATTAGGTGGCGGAGGTGCTCATGGTGCCTATCAAATTGGCGTATGGCAAGCATTGGAAGAACTAAAGATTGGCTATACATTGATTGCTGGAACTTCTGTCGGAGCACTGAATGGGGCCTTAATTTTACAAGGAAATCTTGAATCAGCAAAAAAAATGTGGGAGAAGATCGAAACGAGTCAAATCCTAGCTTTTTCAACTGCAGAAGAGGCTGAAAAAACGTTTATTGCGATGGCAGCAACTAAGATCAACAATCAATACTATGTTGATGGTGGCTATCGAAATAATGTTCCTGTCGATGTAGCATTCGTTCACGGAGCTACGGAATGTATAGTTATTGATGTTAAGGGACCAGGGATTACCAAAGAAATAAAATTGCCAGAAACGGTTCTCGCTATCACGATACAAACACCTTGGACAATGGGTTCTATCTTATTGTTTGACGGGTTGCGTTCAGCACAAAATATACAGCTGGGTTATATGGAAACGATGAAAGCTTTTAATTACTATCGTGGTTTTTGGTATACGATTGATGCGACAGATACGGAAATTATTACGTTTCAAAAAGAGTTTCATGCTTTTTTGGTAAAACGATATGAGATTACACAATTAAATTCTTTTTCATCTAGTCAGAAAATTTGTAGAAAGCTACAAAAGATATATAAAGCTAAAGTATATCCGGAGATCATCGCTCAAGTTCTTTTAGAGCTTTTAGCTAAAAATAGTGATCTTTCTGCTACGACACTATATTCACTAGATGAATTATGCAAGAGAGTAAAAAGCGCGAAAGTAGAAGAGTCAACTCCTGCTACAGTGACAGGGATGATTTCTGTTCAAGAATGGCTAAAACGCTATTATGAAGACTATTTTTTGTTTTCTGAAAAACAGCAAATTCAAGGAATTGCGAATTTGTTAAAAATAAATGAAATCGAAAAAAAACAGCAAGAAATTGCTGTTTTATCCGAGAATCCAAAAGGATGGCGCAAAGAATTTAATTTGGTAAGCTGGAATGGACGACCACCGAAATTTGATATAAGAGACTGGGCGCCAGATCATGAAAAAATGGGTAAAGGAATTACGTTGACCAATGAAGAATTTGAATTATTATCAAAAACAATAAAAACAATGTAA
Protein Sequence
MDHEQLHFSEYKRFLQDVEKSYLLFPFHATHSKARTEFKKNVMQGNGLGYVLYHEKVPVMFLVIQKDVIVNLLLKKDTGLHLKQILSEIEKIYKALFKKYVRFQFQTMLPLPLEEQFIKLGYRFKTPTTLQKRLSYNTALVLGGGGAHGAYQIGVWQALEELKIGYTLIAGTSVGALNGALILQGNLESAKKMWEKIETSQILAFSTAEEAEKTFIAMAATKINNQYYVDGGYRNNVPVDVAFVHGATECIVIDVKGPGITKEIKLPETVLAITIQTPWTMGSILLFDGLRSAQNIQLGYMETMKAFNYYRGFWYTIDATDTEIITFQKEFHAFLVKRYEITQLNSFSSSQKICRKLQKIYKAKVYPEIIAQVLLELLAKNSDLSATTLYSLDELCKRVKSAKVEESTPATVTGMISVQEWLKRYYEDYFLFSEKQQIQGIANLLKINEIEKKQQEIAVLSENPKGWRKEFNLVSWNGRPPKFDIRDWAPDHEKMGKGITLTNEEFELLSKTIKTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-