Basic Information

Gene Symbol
Xbp1
Assembly
GCA_016802625.1
Location
JAEBDU010000001.1:7497624-7500520[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.6 9.5e+03 -2.6 0.1 16 25 29 38 27 39 0.70
2 3 2.6e-16 3.3e-13 50.1 10.8 2 52 43 93 43 94 0.97
3 3 2.1e-05 0.027 15.2 1.0 32 56 87 111 86 115 0.91

Sequence Information

Coding Sequence
ATGAGTGCACCTATCATTATCACTGTTCCCAACAATTACCTGGCGGTGGAGGAGATGGAGTCAAAGGTCGTGGTCGACGTGGCTACCGCTCCATCCAGGAAACGCCGGCTCGACCATCTGACATGGGAAGAAAAAATGCAAAGAAAGAAGCTTAAAAATCGTGTGGCGGCGCAAACATCTCGCGACCGGAAGAAGGCTAAAATGGATGAAATGGAGAGCAGAATAAATCAATGTATGGAAATGAACAAGCGTTTGGTTAGTGAAGTCGAGAATTTAAAAGCAGTGAATGAACGCCTGCTCAGTGAGAATGCAGAGCTTCGGAACGCCACGGCGCGGGCCGTCGGGGGAGCCCCAAGACCAGCAGTGTCTTATCCTCAGCAGAAGGAGGGGCCCCCACCGGCGACCAGCGCGGTGCGCACCCTACTGGCCCTGTTGACCCTCTCGCAGACCTGCTCCAGCACCTCGACTCCCCTGAGTACCTCGACACCCTTCACGAACTTGCCGATACACTGCTCAAAGAAATTACTGGAGATTGTACAGGAGAGAATCAACATGAAAACAGGCATAGTTCCGAAGACAATCAAGGAAGAGAAGTGGTGGGGACCACAACAGAGCAACTGGAACCCAGTCAAAGTGGAGTCCTAA
Protein Sequence
MSAPIIITVPNNYLAVEEMESKVVVDVATAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRINQCMEMNKRLVSEVENLKAVNERLLSENAELRNATARAVGGAPRPAVSYPQQKEGPPPATSAVRTLLALLTLSQTCSSTSTPLSTSTPFTNLPIHCSKKLLEIVQERINMKTGIVPKTIKEEKWWGPQQSNWNPVKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00722774;
90% Identity
iTF_00779265;
80% Identity
-