Basic Information

Gene Symbol
Xbp1
Assembly
GCA_013421065.1
Location
JAATLT010020748.1:3435-6518[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.4 2.4e+03 -1.2 0.0 14 25 27 38 27 39 0.81
2 3 3.4e-16 3.5e-13 49.5 10.8 2 52 43 93 43 94 0.97
3 3 2.5e-05 0.025 14.8 1.0 33 56 88 111 86 115 0.92

Sequence Information

Coding Sequence
ATGAGTGCACCGATCATTATCACTGTTCCTAACAATTACCTGGCGGTGGAGGAGATGGAGTCAAAGGTCGTGGTCGACGTGGCTCCCTCTCCGTCCAGGAAACGCCGGCTCGACCATCTGACATGGGAAGAGAAGATGCAAAGAAAGAAACTTAAAAATCGTGTGGCGGCGCAAACCTCTCGAGACCGGAAGAAGGCTAAAATGGATGAAATGGAGAGTAGAATAAATCAATGTATGGAAATGAACAAGCGTTTAGTTACTGAAGTAGAGAATTTAAAAGCGGTGAATGAACGTCTGCTCAGTGAGAATGCAGAGCTTCGGAACGCCACGGCGCGGGCCGTCGGGGGAGCCCCAAGACCAGCAGTGTCTTATCCTCAGCAGAAGGGGCCCCCACCGGCGACCAGCGCGGTGCGCACCCTGCTGGCCCTGTTGACCCTCTCGCAGACTTGCTCCAACACCTCGACTCCCCTGAGTACCTCGACACCCTTCACGAACTTGCCGATACACTGCTCAAAGAAATTACTGGAGATTGTACAGGAGAGAATCaacatGAAAACAGGCATAGTTCCGAAGACAATCAAGGAAGAGAAGTGGTGGGGACCACAACAGAGCAACTGGAACCCAGTCAAGGTGGAGtcctaa
Protein Sequence
MSAPIIITVPNNYLAVEEMESKVVVDVAPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRINQCMEMNKRLVTEVENLKAVNERLLSENAELRNATARAVGGAPRPAVSYPQQKGPPPATSAVRTLLALLTLSQTCSNTSTPLSTSTPFTNLPIHCSKKLLEIVQERINMKTGIVPKTIKEEKWWGPQQSNWNPVKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00722774;
80% Identity
-