Hnat008619.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliconius nattereri
Gene Symbol
-
Assembly
GCA_013403645.1
Location
JAAIXI010000215.1:621590-628041[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 6.3e-05 0.0043 17.5 2.0 1 23 183 205 183 205 0.98
2 28 0.0012 0.084 13.5 0.6 2 20 233 251 232 253 0.92
3 28 2.3e-05 0.0016 18.9 0.3 3 23 280 301 278 301 0.96
4 28 0.008 0.55 10.9 1.4 1 23 352 374 352 374 0.97
5 28 0.001 0.068 13.8 0.2 1 23 392 414 392 414 0.96
6 28 0.0003 0.021 15.4 2.9 2 23 454 475 453 475 0.96
7 28 0.00091 0.062 13.9 4.2 2 23 523 545 523 545 0.97
8 28 0.025 1.7 9.4 1.6 1 23 595 618 595 618 0.94
9 28 0.0019 0.13 12.9 0.3 1 23 670 692 670 692 0.97
10 28 0.0087 0.59 10.8 5.7 2 23 704 725 703 725 0.97
11 28 0.033 2.3 9.0 1.7 2 23 737 758 736 758 0.96
12 28 0.0018 0.12 12.9 0.7 1 23 768 790 768 790 0.98
13 28 0.0043 0.29 11.8 8.5 1 23 819 841 819 841 0.96
14 28 0.0024 0.17 12.5 2.9 1 23 852 874 852 874 0.96
15 28 4.9e-05 0.0034 17.9 1.3 1 23 882 904 882 904 0.98
16 28 0.0032 0.22 12.2 0.1 2 23 924 946 923 946 0.97
17 28 8.3 5.7e+02 1.4 0.2 1 10 964 973 964 986 0.88
18 28 0.057 3.9 8.2 4.6 1 23 993 1015 993 1015 0.98
19 28 0.013 0.86 10.3 0.8 2 23 1026 1048 1025 1048 0.95
20 28 0.00043 0.029 14.9 0.2 2 23 1071 1092 1070 1092 0.95
21 28 6.7 4.6e+02 1.7 5.9 2 23 1135 1157 1134 1157 0.94
22 28 0.0052 0.36 11.5 0.3 2 23 1173 1194 1172 1194 0.94
23 28 3 2.1e+02 2.8 5.2 5 23 1204 1222 1202 1222 0.94
24 28 0.059 4 8.2 1.0 2 23 1233 1255 1232 1255 0.94
25 28 1.9 1.3e+02 3.4 6.2 2 23 1272 1290 1272 1290 0.88
26 28 0.21 14 6.4 0.8 2 21 1294 1313 1294 1314 0.93
27 28 0.91 62 4.4 1.1 2 23 1363 1384 1362 1384 0.93
28 28 0.0052 0.35 11.5 0.4 2 23 1395 1417 1394 1417 0.95

Sequence Information

Coding Sequence
ATGGCTCTCAAACTTGGAAAGTGTAGGCTTTGCCTCAAACTCGGCGACTTTTATTCCATCTTCACGGTGGACAACAACTTACAGCTCGCTGAAATGGTTATGGAATGTGCCCGAGTAAAGgtATGTGAAGGTGATGGACTTCCAGATAAAATTTGTAGTGAATGTATCCAGAAACTCAGCAGTgctcatatatttaaacagcAATGTGAACGATCTGATCAGGAACTGAGGCGAAACTATATTCCGCCTCCAGGCTTTACTACGTCTACTCCTACTAGACAAAGTAGTGAAGAACAATCAAAACCCTCTCCATCTTTGGAGGGTAAAGTCACACCTGTACCCAAGTCACGTAAAAGAAGCAGGGACAGTATAGACAATGTGTCAATAGGCAGTCATAACGAATATAAACCAGGAACCTCTAAACGTGTTGATGAATTACGTCTATCACAGAAGAAAACAAGATTTTCCACAAATTCAGATTCTGAATTTGAAGACCACAGTGGATTGGTATATTCAGGAGGAACTGATTCTGATGAGCCCTTACTACATAAGTGCGATGAATGTgggaaaacatttaaaactgCCCTCAGTGTAAATGCTCACAAAAAGAGTCACAGACGACGGAAAGTCCAAAAGCCTGTTCAAGTAGAAGAACCCAAGGAGATCCAAGATgctaatgatgatgatgataaactTAGCTGTGACAAATGTGGAAAAGAGTTTAAATTGAAGATAATGCTCAAGCGCCACCATGAGATTTGTCCCAAATCACCCAGAAAGGAGCTAATGGTATCGTTAGAACCGATTGACGCTGTCCAACAGTCTATCAAAATAGATTGCCCAATGTGCACGACGAAATTTAAGAcaattgaaaatttagaaaaacacATGAAGGTAGTTCACGCGGCAGTTCTCAAAAAAGAAGTTACGTCGGTTAAGAACGAAAATGGAAAAACTTGCGTTCCATGCTTCTATTGTGGAGAGGATTTCgaagattattatattcacaGTGCACATTTCAACGTTTGTCCCCAAAAAACTGACACCGTCACCTTCGAGTGCCCGGTTTGTAATAAAGTGATAACTAAAAAAGGTTGTTACTTCTTGCATTTGAAAGCACATTTTTTTCCTGTCAGCTCGAGTAAAACTACTCCGGAGcctgtgaaaaataattttcaatgtcGCATGTGTAACAAGAAACTGCCGAGTCAAGATTCTTTGATTACACATCTAGCCGCTCATATGTCCAGCATGGACGACGCGGATGACGGCGGAGATGAAGAATCCaggGCAAGTACAATGGAGGACTCAGCATCAATACATTCAGAATACAGTGCTAACGTATCGAGTGGACtacttaaatgtaaattttgtgACAAATCCTTTAAATACAGAAAATCTCTACTTAGCCATGAAATAAAACAcacagaagaaaatattaaaaaagaagtgCCAGACACTTCAACAGATCTGCTAAATGAAACAGCAGCAGCAACAACAACAGCTAAAGATAGATATAATCATTATGATTCAGAATCTAGTCAAGATGACGGTGAAGATGATAATACATGCGATATATGTGAGAAGCAGTTTTCCTACAAACGATTACTCTTGCACCACAAACGTACAAAACACAACATGACGTCTGGTACAAAAAGAGCCAAAATTAATCTAAAAGATTGTTCAGTACGCTGCCTCATATGCGATATAGAAATGAAAGTGAGTGCCATCAACGAACATAACCAGACGCATATAAGTGTGAACATAAAGCCGAGGAATCAATACACTTGTATAGAATGCAGTCAACAGTTCAAGAGTTGTAGTGCATTGGccaatcatataaaatttgtccATCGTTTGAAACAACCGCCTATAACGGTTGCTTCCGATTTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACCTTGTCCAGAGTCACAACGGCTTACAGGATTCCGCCGGTAGTGGCACTCCCTTGGTCAATCTGAGTGGTTTTACTTGCACTATATGCAGTAAACAGTTGCCAACGCTTATATCGTTGAAGCGGCACGTCAATTGGCATAACCATGTTGGCAAAAGTATGGAAAAAAAGCTGCAGTGTTTTGTTTGTCAAGAGAACTTTCGGTTTCAGTGTCACTACAAGGCGCACATGCGTGAACACTACAACGATACAAACATCGATCCCAAATATCTGACTTGCTCGATCTGTAACAGGAAGAGCAAGCACCTGCGCGCCGCCCAGGCCCACATGAACTACCACAAGCAAACACGATTCCAGAACAAGGACTATGAGTGTTCTATATGCAAGAAAGTGTTCCAGTACAGAAAAGTCTACCTTTCCCACATGGCTATCCATTATAAACGGGGCGAGAGTGTCAACAACACTATAGTTGGCTCTGTACTACCTAATACGGtggacaaaaatatatatgacggAACGCACACTTGTCACCATTGTGGAAAAGTATGTGATTCAGAAAACTCATTGAAGCATCATATAATTTGGCATAACTCTAAAACTTCGTTGTATGGTGCGAGGCACGCGTGTGATTTATGCAACTTGCAgtttactaacaaaaaaaggTTGGAACTACACACTCGGACGCATTTTGAAGATGATAATGGACCTTTTAAATGTCATATATGTGGAAAAGGCTACATTGTGGAAGATTACTATAAAAGACACATTAAAGGACACAATTTTGATCATCAATCACATAAAAAGAGGATAGAGAAGTTAAGGAAGAATAAAGTGAAATGTCCGATTTGTGCCCGCTTTTATCCAGATGTGGTAAAGCTTATCCGGCATTTGCGTCGGACTCATCCTGAAAGTAAAATGATTAAAGAGGATCCGGACGCGCCAGCGCCTCGATATTACTCATGTAAATTATGCGCTAAAGTATTCTTAGATGAAAAAAGGCTGCAATTCCATGAAGAAGCTCATCTGAGAAAGCCCGAATTCTTCAAATGCAAATTCTGTGGGAAAAAGACCATTTCCCTTAAAAACCATAGGGTGCACATAAAGAGTCATCTAACGCAGAAATACATCGATGATCCCTTGAAATGTCCTCAGTGTGAAGAGAAATTTATGAGGGGCTACGACCTACATTATCACTTAAGAGATGCTCATGGGATTAATGAAACATGGATAGCTGAACGTGGGGTTCAAACGCTGGATGGGCCCTTAAAGGAACTCCAGTGTTCCATTTGCTACAAAGTATTGGCTACTAAAGGAAACTTCGAGAGACACATAGATTACCACAATTCGCTAAGATGCAACTATTGCTTCGATTACTTCAGCTCCTTACGCTTCCTTGAAGGACATTTAGCGTTCAGCTGTGATAAAAAGAAACTCATTGGTGATACAGAAATACATCCAAGAAAAGTCAAGTGCCATATTTGTTACAAAGCATTCCATTTACAAGTCAAACTGGACTGCCACTTGCGGACGCAACACggaataaaagtatttaaagaaGCTTCCGAAAGCAAAAAGGAACTAACGTGCGACTATTGCTTTAAAGTTTTCGAAAATGAGTACGCGTTGGGTAATCACAAGATCTACCATCGCACTATCGGGTACTTCGGGTGCATATACTGCAACAGGAAGTTTAATACAATGACGCTGTACAGGAAGCATAAGAACCATCATTTTGCACAATTGAATGTAGATGAGCCGACAAAATGTGAACATTGTGACGAAAAGTTCGTAGCGTTCAGAGAAATGATCTACCACATGAAAGACGTTCACGGAGATGATAAAGAATGGGTGATCCTACCTAAAGAGTCGATTGAAGAAAAGTGTAACATCTGTCATAAAACTTTCTTCAATCTTCATAAGCATTTGGCTTACCACGAGGAGAACAGGTGCAAAAAATGTGGAGAATATTTCTATTCGCTTTTGGACCTCGATAATCATCTGTGTGCGATAGAAAGTGATGAAGAAGTCACCGAATCTAATAATGACGTACTCCGACAAGTTTACGAGGAGTGTAGTTTCTGTTTCAAACCGGTAACTAAGAAGAATTCTAAAAAGAAACACGATAAAATCCACAGAGGTTCTGGGTCCATATCGTGTCGGTTCTGTTTCCTGAAGTTCAAAACAATGGACGCGTTTAACATCCACGCTTTCTCCCACAGGAgtaggaaatataataaaaagcctATTAAATGTCGTAAATGTGGGGAGCAATTTGTTAAATACGGTCcgtttattaaacatatgaaACTAGTGCACAAGTCGTCGAAAAAAATGCATTACAGAGCCATCGTGATGCCCGAGACGTGTGTGGTTTGCAACGACAAATTTCCCAATCTGCATAACCACTATCGGGCTCATTTACAAAATCAGTGCCACCagtgttgtaaatatttcacctcTTTCAAAGTGTTCTCACAACACCAATGCGACAAAGAAGACATGAATCCAAGCAAAGTTTTCACATCAGACGCAAATTTACCTCAACTCATAAATACTTATGAACCAAAAGACGAGAAGGACGACGAGAAGTATTACGGCCATGAAGAAACAGAAACTGAAGAAGAAAAGTTAGTTATAAGAGaagagaaaaattatataagtaaagtgGAAATATTATCTCATGATGAGGATAGTCAGAATTCAATTGATATAGACGAAGGGCAAGTACATGAGATGGCACACACGCCTATTATTTCAGACgttctttctttatataagaaggatgataaaattattgataatgATAATCCAAGCGTGAGCGGCAATGTTGTAATTTTGACAGATGACGAGGATTCTATAGGCTTTAAGGACACTGCAAGTGTTATAACAATTGAGGATTGa
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNNLQLAEMVMECARVKVCEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYIPPPGFTTSTPTRQSSEEQSKPSPSLEGKVTPVPKSRKRSRDSIDNVSIGSHNEYKPGTSKRVDELRLSQKKTRFSTNSDSEFEDHSGLVYSGGTDSDEPLLHKCDECGKTFKTALSVNAHKKSHRRRKVQKPVQVEEPKEIQDANDDDDKLSCDKCGKEFKLKIMLKRHHEICPKSPRKELMVSLEPIDAVQQSIKIDCPMCTTKFKTIENLEKHMKVVHAAVLKKEVTSVKNENGKTCVPCFYCGEDFEDYYIHSAHFNVCPQKTDTVTFECPVCNKVITKKGCYFLHLKAHFFPVSSSKTTPEPVKNNFQCRMCNKKLPSQDSLITHLAAHMSSMDDADDGGDEESRASTMEDSASIHSEYSANVSSGLLKCKFCDKSFKYRKSLLSHEIKHTEENIKKEVPDTSTDLLNETAAATTTAKDRYNHYDSESSQDDGEDDNTCDICEKQFSYKRLLLHHKRTKHNMTSGTKRAKINLKDCSVRCLICDIEMKVSAINEHNQTHISVNIKPRNQYTCIECSQQFKSCSALANHIKFVHRLKQPPITVASDLADFCEVVVTKAEPLDLVQSHNGLQDSAGSGTPLVNLSGFTCTICSKQLPTLISLKRHVNWHNHVGKSMEKKLQCFVCQENFRFQCHYKAHMREHYNDTNIDPKYLTCSICNRKSKHLRAAQAHMNYHKQTRFQNKDYECSICKKVFQYRKVYLSHMAIHYKRGESVNNTIVGSVLPNTVDKNIYDGTHTCHHCGKVCDSENSLKHHIIWHNSKTSLYGARHACDLCNLQFTNKKRLELHTRTHFEDDNGPFKCHICGKGYIVEDYYKRHIKGHNFDHQSHKKRIEKLRKNKVKCPICARFYPDVVKLIRHLRRTHPESKMIKEDPDAPAPRYYSCKLCAKVFLDEKRLQFHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKSHLTQKYIDDPLKCPQCEEKFMRGYDLHYHLRDAHGINETWIAERGVQTLDGPLKELQCSICYKVLATKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKLIGDTEIHPRKVKCHICYKAFHLQVKLDCHLRTQHGIKVFKEASESKKELTCDYCFKVFENEYALGNHKIYHRTIGYFGCIYCNRKFNTMTLYRKHKNHHFAQLNVDEPTKCEHCDEKFVAFREMIYHMKDVHGDDKEWVILPKESIEEKCNICHKTFFNLHKHLAYHEENRCKKCGEYFYSLLDLDNHLCAIESDEEVTESNNDVLRQVYEECSFCFKPVTKKNSKKKHDKIHRGSGSISCRFCFLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCGEQFVKYGPFIKHMKLVHKSSKKMHYRAIVMPETCVVCNDKFPNLHNHYRAHLQNQCHQCCKYFTSFKVFSQHQCDKEDMNPSKVFTSDANLPQLINTYEPKDEKDDEKYYGHEETETEEEKLVIREEKNYISKVEILSHDEDSQNSIDIDEGQVHEMAHTPIISDVLSLYKKDDKIIDNDNPSVSGNVVILTDDEDSIGFKDTASVITIED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01079240;
90% Identity
iTF_00780441;
80% Identity
-