Basic Information

Gene Symbol
Ncor2
Assembly
GCA_013403645.1
Location
JAAIXI010000223.1:7610135-7623631[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-07 0.00018 21.7 0.0 1 43 354 396 354 398 0.96

Sequence Information

Coding Sequence
ATGCTCCTGTTGCATATCCTGCTCAGAGTAAGCAGGGACGGCTACAGCCGCGGTGCAGGCGGCGGCGGTGGCGGCGGTGGTGGTGGTGGAGGTGGTGGCGAGTACCGCGGCACGCGCATGTCGCTGCTGGGCTCGTACCTGCCGCCGCCCGCGCCCCCAGCCCACCACCCTCCCCCCGCCGACCCCCCACCCTTCAAGAAGATACGTCTCACCGCCGAAAGACCAGCTCCGCATCAGCAACTCAGAGTTGATACTAGGgAGCCAGTTATGAATTCACATACCGTGGAGGTCTTATCTCCACACACACCTTCCGAGCCTACCATTGATGAACAGAGCTTCCGCACCACAAAAGATGATCTTTTACAGCAAATATCtaagGTGGATAGAGAGATGGCGTTATCGGAGACGACGCTACAGAAGTTAAAGAAGAAACAAGAGGAATTAGAGCAAACTGCATCAAAACCGGCGCGGGCGGAGGAACCTGAAGAGGCACCTCCACGACATAGAAGCTTAGCACAGTCAGCCCACGCTGTTCTCTCGCACCTGGGCCCCACGGTACTGTACCCGCTATACAACCAGCCCCAGGACACGCTCGTCTACCACGAGAACATTAGGAAGCACCGCGCCTTCCGGAAACGACTCTCCGAACATTTGAGGAGACTTCGCGTTGAAGCGGAGAATCGTGAAGACGCGTTAACAGAGGAGTACAGTCGACGCGCCGCGGATTGGATGCGGAGAGTGGAGAGAATAGAACAGGGACAGAAGAGGAAAGCGAAGGACGCGAGGAACCGCGAGTTCTTCGAGAAAGTATTCCCAGAACTaaggaaacagcgtgaagagCGTGAGAGATTCAACCgtcttggtgccagagtgaAGTCAGAAGCTGAATTAGAAGAGATAGCTGATGGACTCCACGAACAGGAGCATGAGGATAAGAAGATGAGGTCGCTGACTGTGGTGCCCCCGCTACTGAGGGACCCAAAGGAAGCCAGGCCTTTGCATTTAGATACTAATAAGCGTTGTATAGACATGGAATGCTCTCACAAGGCGCTTCAGCTCCGCAATGTGTGGTCTTCGGCCGAGCGGGAGGTGTTCCGAGACAAGTACCTGCAGCACCCCAAGAACTTCGGCACCATCGCCTCTTTCCTGCCCAGGAAGAGTGTTAGGGATTGTGTTAGGTTCTACTACTTATCCAAAAAGGCGGAGAACTATAAACAATTGTTACGGAAGCCCCGGCCGAGGCGGCACGCGAGGCCGAGGCCGCCGCCGGAGCCCGAGCTGCCGGCGGGAGTCACCACGCGGTTGCAGCGGTCGCAAGGATCAGCTCGTACAACAGACAAGGAGCCGAGCCTAGAAGAGATGCAACAGACGGACCAGACCCCCGTCAACTGCATACCGGTGCCGCCCGCTGCGCCCGCGCATCCTGCCAGGTCGGAGTTGAACAGAACGCCGCCATTACCTCCTTCCCCGCCACCAGCGTCGTCAGCACCACCGGTGGCCATCACCACGACTAGCTTAAGCGTTCCCAGCCCCAGCTCGATGAGCTGTTCCAGTGGCTCTAGTAACCCCATTGTCCCAAATAGTTCAGTGACCAGTGTGTTGACAAGTACTAGTGGTGTCAGTGTCAGTGTGAGTATGTTAAGTGTGCCGAGTGTACCTAGTGTCCCGGTGGGCAGTCCCGCCCCGGCGCCTACGCCCCCGGTGTCGGAGACACCGCTGCCGCCCGCGCCCTCGCCCCAGCCACCAACGGCTACAACGAGCACTCCTACTGTGATTACTACGACATCAGTGTCGAGCGGCGGTGCCGGCGGCGCTGTGTCCACGTCGTCGTCGGGCAGCGCGCCGCCCACGCCGCAGCCTGCGCATCCGCCCACGCCCACGCATCCGCCGCCCACGCCTGAACCAGggaAAGTTTTAGGTTTCTAA
Protein Sequence
MLLLHILLRVSRDGYSRGAGGGGGGGGGGGGGGEYRGTRMSLLGSYLPPPAPPAHHPPPADPPPFKKIRLTAERPAPHQQLRVDTREPVMNSHTVEVLSPHTPSEPTIDEQSFRTTKDDLLQQISKVDREMALSETTLQKLKKKQEELEQTASKPARAEEPEEAPPRHRSLAQSAHAVLSHLGPTVLYPLYNQPQDTLVYHENIRKHRAFRKRLSEHLRRLRVEAENREDALTEEYSRRAADWMRRVERIEQGQKRKAKDARNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVVPPLLRDPKEARPLHLDTNKRCIDMECSHKALQLRNVWSSAEREVFRDKYLQHPKNFGTIASFLPRKSVRDCVRFYYLSKKAENYKQLLRKPRPRRHARPRPPPEPELPAGVTTRLQRSQGSARTTDKEPSLEEMQQTDQTPVNCIPVPPAAPAHPARSELNRTPPLPPSPPPASSAPPVAITTTSLSVPSPSSMSCSSGSSNPIVPNSSVTSVLTSTSGVSVSVSMLSVPSVPSVPVGSPAPAPTPPVSETPLPPAPSPQPPTATTSTPTVITTTSVSSGGAGGAVSTSSSGSAPPTPQPAHPPTPTHPPPTPEPGKVLGF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2