Basic Information

Gene Symbol
Ncor2
Assembly
GCA_037178615.1
Location
JAZFAU010000239.1:1315220-1336128[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.2e-08 0.00018 22.6 0.0 1 43 451 493 451 495 0.97

Sequence Information

Coding Sequence
ATGCCCCATATCTTGAAATCGGGCGCAAAACGAAAATCAGAGATTCTTGACGCGAAGACCTCTGTGCTTCTCCGCTATGCAGGATGCTGCTTGAAGAGTACCAATGGACTCAATCCGCACACCGTTGGTGACGTTCAATCGCCCAACATCCGCACTGAGCCCGGGCAAACGGATCACGGGCACGGGGCGCTGGCGTACGGCGGCAAGCAGGCGGGCGTGGCGCCGGCGCGACCCGCCGCGCCCTACGCCGCGCCCTTCTCACCCGCCCTGCGGCTGCAGCCCGGGTATGGATCGGCGGCATTGTCTTATAGTAGGGACAGCTACAGCCGCGGCGCAGGCGGCGCTGGCGGCGCGGGCGAGTACCGCGGCACGCGCATGTCGCTGCTGGGCTCGTACctgccgccgcccgcgccgcccgcccaccACCCGCCGCCCGCCGATCCCCCGCCCTTCAAGAAGATCCGCCTCACGGCAGAGAGACCCGCCCCGCATCAGCAGCTCAGGGTTGATACTAGGGAGCCAGTTATGAATTCACATACCGTGGAGGTCCTGTCTCCACACACACCTTCCGAGCCCACGATTGATGAACAGAGCTTCCGCACCACAAAAGATGATCTTCTACAGCAAATATCTAAGGTGGATAGAGAGATGGCGTTGTCGGAGACGACCCTCCAGAAGTTAAAGAAGAAACAAGAGGAACTAGAACAGACAGCGTCGAAGCCTGCGAGGGCGGAGGAACCTGAGGAGGCTCCTCCTCGCCATCGCAGCTTGGCACAGTGTATATATGCTGATAATAGGAAAAGGGCTGCAGCCGCCCACGCACTATTGGCTCACCTCGGGCCCACGGTGCTGTACCCACTGTACAACCAGCCGCAGGACACGCTCGTCTACCACGAGAACATACGGAAGCACCGCGCCTTCAGAAAACGACTCGCCGAGCACCTGCGGAGAGTTCGCGTCGAGGCGGAGAATCGTGAAGATGCGTTAACAGAGGAGTACAGCCGACGCGCAGCGGACTGGATGAGGAGAGTGGAGAGAATAGAGCAGGGGCAGAAGAGAAAAGCGAAGGACGCGAGGAACCGCGAGTTCTTTGAGAAGGTATTCCCAGAACTAAGGAAACAGCGTGAAGAACGCGAAAGATTCAACCGTCTCGGCGCCAGGGTGAAATCTGAAGCTGAACTGGAAGAGATTGCTGACGGCCTCCACGAGCAGGAGCACGAGGACAAGAAGATGAGGTCCCTGACTGTGGTCCCTCCACTGCTGCGGGACCCTCGGGAGGCCAGGCCTTTGCATTTAGATACTAATAAGTGTTGTATAGACATGGAGTTCGAGCACAAAGCTCTGCTGCTCCGCAACGTGTGGTCGGCGGCGGAGAGGGAGGTGTTCAGAGATAAATACTTGCAGCATCCCAAGAACTTCGGCACAATAGCATCCTTCCTACCCAGGAAGAGCGTTAGAGATTGTGTTAGGTTCTACTACCTCTCCAAAAAGGCGGAGAACTACAAGCAGTTGTTACGGAAGCCCCGTCCGAGGCGGCACGCGAGACCGAGGCCGCCGCCGGAGCCCGAGCTGCCGGCCGGCGTCACTACACGCTTACAACGGTCGCAAGGCTCAGCTCGTACAACGGATAAGGATACGAACCTGGAAGAGATGCCGGAGCAGACGCCGGTCAACTGCATCCCGGTGCCGCCCGCCGCTGCGCATCCCGCCAGGTCGGAGTTGACCAGAACGCCGCCATTACCTCCCTCACCGCCACCAGCGTCCTCAGCACCACCGGTGGCAACTACGAACAGCTTAAATATTCCGAGCCCCAGCTCTATGAGCTGCTCTAGCGGATCTAGCAACCCTAGTGTCCCAAATAGTTCAGTGTCCAGTGTCTTGACAAGTACTAGTggtgtcagtgtcagtgtcagtgtgTTAAGTGTCCCGAGTGTACCGAGTGTCCCGGTGGGAAGTCCCGCCCCAGAGCCTACGCCCCCCGTCGCGGAGACTCCGCTGCCGCCCACGTCTGGACCGGAACCCCCTACGGTTGCAACGAGCACGCCTACTGTGATCACGACAACATCGGTGTCGAGCGGCGGTGGTGCGGTGTCGACGTCGTCGTCGGGCAGCGCGCCGCCCACGCCACAGCCGGCCCATCCGCCCACGCCCACGCATCCGCCGCCCACGCCTGAACCTGGTATGTAA
Protein Sequence
MPHILKSGAKRKSEILDAKTSVLLRYAGCCLKSTNGLNPHTVGDVQSPNIRTEPGQTDHGHGALAYGGKQAGVAPARPAAPYAAPFSPALRLQPGYGSAALSYSRDSYSRGAGGAGGAGEYRGTRMSLLGSYLPPPAPPAHHPPPADPPPFKKIRLTAERPAPHQQLRVDTREPVMNSHTVEVLSPHTPSEPTIDEQSFRTTKDDLLQQISKVDREMALSETTLQKLKKKQEELEQTASKPARAEEPEEAPPRHRSLAQCIYADNRKRAAAAHALLAHLGPTVLYPLYNQPQDTLVYHENIRKHRAFRKRLAEHLRRVRVEAENREDALTEEYSRRAADWMRRVERIEQGQKRKAKDARNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVVPPLLRDPREARPLHLDTNKCCIDMEFEHKALLLRNVWSAAEREVFRDKYLQHPKNFGTIASFLPRKSVRDCVRFYYLSKKAENYKQLLRKPRPRRHARPRPPPEPELPAGVTTRLQRSQGSARTTDKDTNLEEMPEQTPVNCIPVPPAAAHPARSELTRTPPLPPSPPPASSAPPVATTNSLNIPSPSSMSCSSGSSNPSVPNSSVSSVLTSTSGVSVSVSVLSVPSVPSVPVGSPAPEPTPPVAETPLPPTSGPEPPTVATSTPTVITTTSVSSGGGAVSTSSSGSAPPTPQPAHPPTPTHPPPTPEPGM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00780984;
90% Identity
iTF_00621193;
80% Identity
-