Hnat006927.1
Basic Information
- Insect
- Heliconius nattereri
- Gene Symbol
- JARID2
- Assembly
- GCA_013403645.1
- Location
- JAAIXI010000253.1:1652859-1666470[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-15 7.5e-12 45.6 0.0 9 88 595 670 589 671 0.84 2 2 1.1 2.6e+03 -1.0 0.0 3 38 679 737 677 745 0.62
Sequence Information
- Coding Sequence
- ATGGGaaaaattaTGGCGCAAAGAAAATTTGCTCAAGGCGTGTATGTCCCCCCACATTCCGCACAGATTACCAATCGTAAAGTTACCGATCTTGTAAAAGatcaaacaaatataatacgcAGACAGACAACTGCAAAGGTTCTATTAGATGTCATATCTTTGGAGAACATTCACAAGCACAAACCAGTTGTGCTTTTGGAAAGGCTAAAAAATGTTGATgctgttgaaaatataatcgCAGAACCCGATAACAGCTTGATTATTGAAGTAAACTCAGCTCCAAGTGTACCTATAAAATCGCTTCTCCAAACACAAATAACTGGAAGAAGTTCATTATTGAAAAGATCTGGACctaagaaaaatctaaaacgAAGTATAAGGAACAGACATAAAGTAAAACAACGTCGCAATCCTATCCGAAAAGCTGCTTTTAAAGCATCTTTGCGATGGAAATATACTTCAACAGTTGACACCGAGTTTTCCGTCGACGATGATCAACCATTGACCTATTTTACAAGATCAGGCTTTATAAATGGATCAAGGCAGAATGCAATTATATTGGGTTCAAAAAAGAACAACTCAGGACCCAAATCCACACCATCATATGTTGTTGAGCGTTTGCCACTTGTTAAAAGTGgaCTAGAGCCTTCAACGTCTGTTGGAAACGATCATGTACTTGAGCCTTCTATGAATGAAGACGACACATTACTTGATTCAAAATCCGATACTTACATAGAGGATGctgAATGTACTCCCAGCTGGAGGGCACCTACCGCTACCAGCTCTGCACCATTCAAACAGAGCTCAGACCCATCGAATGacGAGACACAACCTGGACCTAGCGGTCTACGATCACGGTCGACATCGAAACGAGGATGGGCGAAATCTGAACCCAGTGACATATCTTCAATTACGGAGACACCAGTTGatgGTGGGGTTCAACCGGGCCCTAGCAGAAATCATGGTCGTAAATACAAGGCCAAAGACAAGTCTAAATGCGCATCACCACctgatACTGCCCAACCAGGACCCAGCGGTCTACAATCGCGCTCCGACCCACAAAACGAAATAGACTTTAATCAAGGTGGCCGTAGGGCTCAATCTCCCGTCAATTCCAATTCATCGCATgatgACTTCTCACATCGGGCCACATCTCCGACCAACGCTGAGGAGTCTTTagctaGCGGGATGTCCAGAGCAGAAGACCCTGAGTCTAGAAACAAGATGATACGAGTGTGGCtggaaaatggaatatttaaagttcCGAAAGTGCCGAAAGCTAGGACCTCACAAAATTCTCCACATCCTAGCGTGGAGGAGGAGCGTCCTCGCAGACATCAGCAGTCCGGCGGTCGCCGTTTCAACACTCCTGGCCTGCGGGTGAGCTCGGAGCGTTCTAGCAGCCCCATGTCTTATATGACGACGCTCGATAATACGGAACTCGAGCAAGTCATCGAGTCTGACGCCACCGAAATCACTGTACCCACAAGAAGGGATAGAATGCAAGTGTTGCCATCGAGACGCCAGAGGGTCAGGTTCGAGCGCGCCAAACTGGCTGATGCGCCCACCTTCCGTCCCACCGAGGACGAATTTAAGGATCCCGTAACTTACTTTGAGAAAATAATGCCATGTGCGGCTAAATATGGACTATGTAAGGTAGTCGCACCGCCTGGGTTCAAACCGCAGTGCAACCTAAACGATGCAATGCGGTTTACAGTATTCAATCAATATATAACAAGAGTGTTCCGGCGATGGAGTTCTTTGACGAGGGAGATGTGCACCATGAGGTCCCATCTTGCTACACTGAAGATAGCTTGTACACAACCGCCCTTGctggGAGGCATGGAAGTTAATTTGCCAAAACTTTACGAATCCGTAAATAATAACGGcggcttaaaaaatatgaacaagAAAGCTTGGGCCAAAGTAGCTGAGGAGCTTAACTGTGGTAAACTGTCGCATCCAGATAGGAGACTGGACCAGTTGTATATGAAGTACGTGGTGCCGTACAACTCTCTTAGCAAAAgaGAGAGAAAAGAGATGATAAGAAAGGTCGAGGAGCTGTGGCAAAAAAGGCATAGAAGGATGCTCGAtagggcatcgaacccactacaCACTCAAAAACACATGTTGGGAGAATCTGATTCATCTGATGACGACGAGGAATGTATCATTAAGGGCCGTCCTATGGATCTCCTTACCTTCAAAaggATCGCAAATAACGTTCAAAAGAGATACTTGCCCACCCGTGTTGGGATAGATGAATTAGAGAACTCATACTGGTCATCTGCTCTTATGGCGGAACATCACGTGTGCGTTCATAGCGCTTCTATAGAAACAAGCAGCGAGGGATACGGCTTCACTAACAACCCGAATGAACCATACGGCCAACATCCCTGGAATTTAAAGATGTTAAACCAAAACAATGGAAATATCCTCCGTTTACTCGGCTCTGTGGTCGGCCTGACCATTCCCACACTACACCTGGGGATGCTCTACTCCACCAGCTGCTGGCACCGCGACCCCCACGGCTTACCATGGATGGAGTACATGCACGAGGGGCCTCCAAAAATATGGTATGGAATACCAGACGAAGAAAGCGAGAGATTCCGTAAGGCGGTGGAAATATTATGTCCTACGTCGTGCCAAAATAAATCGATTTGGCTCCCATCTGATATCACAATGATACCACCGAACTTTTTACTAGAACATTCAGTGTCCATGTCAAAGGTGTTGCAAAAACCGGGGGAATTTGTCATTGTATTTCCCAAAGCGTACTCCTGTTCCATAGCCACTGGCTTTACTGTCTCTGAGAGTGTCTATTTTGCTTATAACCAGTGGATAAATAACATCGGTCAAGTCTTTCAAGAGCTACGCGACAGCTGCGAGCCGTCCATGTTTTCTCTCGAGCATCTGTTGATCTCAGCCGCGACGGACCCGCGCGCGACATTCAATGTGCTGCAACTAGTGCACGCCAGCATGTCCAACATAGTGGGCACCGAGCTGGCTCACCGGGCGGCCCTCGTCAAGCATGGCCTCAAGCCTCGCTTCGAGAAAAGGCACAACCCAACAGGCATTGTGTGGAACATTTCGGAGGAAGACGAGTGCGAAATATGTCGcgctaatttatatttgtccaGGGTAAACGGAGTTTTTCACAGAGATGGCGCTCTCTGTGTTGGCCACGCCCTGCAGGTGCTGGACGAACGCATACCGAACATAAGGCGACGGAGCCAGTGTCACTACGAACTGGTCATTTACATGACAGAAACAGAACTAAAACAGATTGTTGAGAGGATCTCCAAAAGACTTGTGGACGTGACCCGCGTTGTCTaa
- Protein Sequence
- MGKIMAQRKFAQGVYVPPHSAQITNRKVTDLVKDQTNIIRRQTTAKVLLDVISLENIHKHKPVVLLERLKNVDAVENIIAEPDNSLIIEVNSAPSVPIKSLLQTQITGRSSLLKRSGPKKNLKRSIRNRHKVKQRRNPIRKAAFKASLRWKYTSTVDTEFSVDDDQPLTYFTRSGFINGSRQNAIILGSKKNNSGPKSTPSYVVERLPLVKSGLEPSTSVGNDHVLEPSMNEDDTLLDSKSDTYIEDAECTPSWRAPTATSSAPFKQSSDPSNDETQPGPSGLRSRSTSKRGWAKSEPSDISSITETPVDGGVQPGPSRNHGRKYKAKDKSKCASPPDTAQPGPSGLQSRSDPQNEIDFNQGGRRAQSPVNSNSSHDDFSHRATSPTNAEESLASGMSRAEDPESRNKMIRVWLENGIFKVPKVPKARTSQNSPHPSVEEERPRRHQQSGGRRFNTPGLRVSSERSSSPMSYMTTLDNTELEQVIESDATEITVPTRRDRMQVLPSRRQRVRFERAKLADAPTFRPTEDEFKDPVTYFEKIMPCAAKYGLCKVVAPPGFKPQCNLNDAMRFTVFNQYITRVFRRWSSLTREMCTMRSHLATLKIACTQPPLLGGMEVNLPKLYESVNNNGGLKNMNKKAWAKVAEELNCGKLSHPDRRLDQLYMKYVVPYNSLSKRERKEMIRKVEELWQKRHRRMLDRASNPLHTQKHMLGESDSSDDDEECIIKGRPMDLLTFKRIANNVQKRYLPTRVGIDELENSYWSSALMAEHHVCVHSASIETSSEGYGFTNNPNEPYGQHPWNLKMLNQNNGNILRLLGSVVGLTIPTLHLGMLYSTSCWHRDPHGLPWMEYMHEGPPKIWYGIPDEESERFRKAVEILCPTSCQNKSIWLPSDITMIPPNFLLEHSVSMSKVLQKPGEFVIVFPKAYSCSIATGFTVSESVYFAYNQWINNIGQVFQELRDSCEPSMFSLEHLLISAATDPRATFNVLQLVHASMSNIVGTELAHRAALVKHGLKPRFEKRHNPTGIVWNISEEDECEICRANLYLSRVNGVFHRDGALCVGHALQVLDERIPNIRRRSQCHYELVIYMTETELKQIVERISKRLVDVTRVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00779305;
- 90% Identity
- iTF_00781610;
- 80% Identity
- -