Hhim017483.1
Basic Information
- Insect
- Heliconius himera
- Gene Symbol
- Jarid2
- Assembly
- GCA_013421065.1
- Location
- JAATLT010007979.1:31587-53614[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-15 6.2e-12 45.9 0.0 9 88 445 520 439 521 0.84 2 2 4.2 1.1e+04 -2.9 0.0 25 39 593 607 578 630 0.77
Sequence Information
- Coding Sequence
- gtagaaGCTGGGTCAACATTACACGTACCAAACACAGAGCAGCCTACTCAGAATAATGtaGAAGCTGGGTCAACACTACACGTAACAAACACAGAGCAGCCTGCTCAGAATAATGtagaaGCTGGGTCAACACTACACGTACCAAACACAGAGCAGCCTACTCAGAATAATGACGACATGTTAATTGATTCAAAATCCGATATATACATACAGGATGctgtATATACTGGGGGCTGGAGGGCACCTCCCTGTAGCAGCCAGGCACCATTCAAACAGATACCAGATCCATCGAATGACGAGACACAACCTGGACCTAGCGGTCTACGATCACGATCACGATCATCATTGAGACGtgGATGGCGGAAATCTGAACCCAGTGACACATCTCCAATTTCAGTGACATCAATTGAtgACTATGCACGGTCTGGAACTAGCGGTGTTCAATCAAACAGACAAGTAGAACGCACACCTGATGATGATGGAGCTCAACCAGGGCCAAGTGGCGTGCGTTCCAGCGCCCAGGGGTCCATTAatgGTGGGGTTCAACCGGGCTCTAGCAGAAATCAAGGTCGTAAAGGCAAAGCTAAGGACAAGTCTAAATGCGCACCACCACctgATACTGCCCAACCAGGACCCAGTCTACAATCGCGATCCCACGCACAAAGTgatatagAGTTGAATCAAAGTGACCGTAGGGCTCAATCTCCCATCAATCTCGAATCGGCATATgatgATGGGATATCCAGAGCAGAAGATCCGGAGTCCAAAAACAAGATGATACAAGTGTGGctggaaaatggaatatttaaagtTCCGACGGTGCCGAAAGCTAGGACGCCGCAAAATTCTTCACACGCCAACATGGAGGAGGAGCGTCCACGCAGACATCAGCAGTCCGGCGGTCGCCGTTCCAATGCTCCTAGCCTGCGAGCGGGCTCGGAGCGTTCTATCAGCCCCATGTCCTTTGTAACGGCGCTCGACAACACCGAACCCGAGCAAGTCATCGACGCTGACGCCACGGAAATCACTGTACCCACCCGAAGGGATAGAATACAAGTGTTGCCACCGAGGCGCCAGAGGGCGAGGTTCGAACGCGCCAAACTGGCTGATGCGCCCGTCTTCTGTCCCACCGAGGACGAATTTAAGGATCCCGTAACTTACTTTGAGAAAATAATGCCACGTGCAGCGAAATATGGACTATGTAAGGTGGTCGCGCCGCCTGGGTTCAAACCCGAGTGCAACTTAAACGATGCTATGCGCTTCACAGTATTCAATCAATATATAACAAGAGTGTTCAGGCGATGGAGCACTTTGACAAGGGAAATGTGTACCATGAGATCCCATCTGGCTACACTAAAGATAGCTTGCACACAACCGCCCTTGcttggCGGTATGGAAGTTAACCTGCCAAAACTATACGAATCTGTGAATAATAATGGCggcataaaaaatatgaacaagaAAGCTTGGGCCAAAGTGGCTGAGGAGCTTAACTGTGGCAAGTTGTCTCATCCAGATAGGAGACTGGACCAGTTGTACATGAAGTACGTGGTGCCGTACAACTCTCTTAGTAAAAggGAAAGGAAAGAGATGGTAAGAAAGGTCGACGAACTGTGGCAAAAAAGACATAGGAGGATGCTCGACAGGGCATCGAACCCGTTACACACTCAAAAACACACGTTGGGAGAATCTGATTCATCTGATGACGACGGTGAACTGGAAGATGAACGAAGATTCCCACACATAGTAAAACAATTAAAGGAAGCAGAGGAATGTATCGTAAAAGGCCGTCCTATGGATCTCCTTACCTTCAAAAGGatcGCAAATAACGTTCAAAAGAGATATTTGCCCACCCGCGTTACAATGGATGAAATAGAGAACTCTTACTGGTCATCTGCTCTCATGGCGGAGCACCACGTGTGCGTACACAGCGCTTCCATAGAAACAAGCAGCGAGGGGTACGGCTTCACTAACAACGCGAATGAACCGTATGGCCAACATCCCTGGAATTTGAAGATGTTAAACCAAAACAATGGAAATATCCTTCGTTTACTTGGCTCTGTGGTCGGCCTGACCATCCCCACACTGCACCTGGGAATGCTCTACTCCACCAGCTGCTGGCACCGCGACCCCCATGGGTTGCCATGGATGGAGTACATGCATGATGGGCCGCCGAAAATATGgTATGGAATACCAGACGAAGAAAGCGAGAGATTCCGTAAGGCGGTGGAAATATTATGTCCTACGTCGtgccaaaataaatctatttggCTCCCATCTGATATCACAATGATACCACCAAACTTTTTACTAGAACATTCCGTGTCCCTGACAAGGATGTTGCAAAACCCAGGGGAGTTTGTCATTGTGTTTCCCAAAGCATACTCCTGTTCTATAGCCACTGGGTTTACTGTGTCTGAGAGTGTCTATTTTGCTTATAACCACTGGATAAATAACATCGGTCAAGTCTTTCAAGAGCTACGTGACAGCTGCGAGCCGTCCATGTTTTCCCTCGAGCATCTGTTGATCTCAGCGGCGAAGGACCCGCGCGCGACTCTCAACGTGCTACAGCTGGTGCACGCCAGCATGTCCAACATAGTGAGCACCGAGTTGGCTCACCGAGCGGCTCTCGTTAAACATGGCCTCGAGCCTCGCTTCGAAGAAAGGAACAACCCAACGGGCATTGTGTGGAATATTTCGGAGGAAGACGAGTGCGAAATATGTCGCGCTAATTTATATTTGTCTAGAGTAAACGGAGTTTTCGACAGAGATGGCGCTCTGTGCGTCGGCCACGCCCTGCAGGTGCTAGACGAGCGTGAACAGAACCTACAGCGACGGAGCCAGTGTCACTACGACCTGGTCATTTACATGACGGAAACCGAACTCAAACAGATTGTTGAGAGGATCTCCAAAATAATTGTGGACGTGAGGATGGCGCAGGCTTTCCCCCGCGttgtgtaa
- Protein Sequence
- VEAGSTLHVPNTEQPTQNNVEAGSTLHVTNTEQPAQNNVEAGSTLHVPNTEQPTQNNDDMLIDSKSDIYIQDAVYTGGWRAPPCSSQAPFKQIPDPSNDETQPGPSGLRSRSRSSLRRGWRKSEPSDTSPISVTSIDDYARSGTSGVQSNRQVERTPDDDGAQPGPSGVRSSAQGSINGGVQPGSSRNQGRKGKAKDKSKCAPPPDTAQPGPSLQSRSHAQSDIELNQSDRRAQSPINLESAYDDGISRAEDPESKNKMIQVWLENGIFKVPTVPKARTPQNSSHANMEEERPRRHQQSGGRRSNAPSLRAGSERSISPMSFVTALDNTEPEQVIDADATEITVPTRRDRIQVLPPRRQRARFERAKLADAPVFCPTEDEFKDPVTYFEKIMPRAAKYGLCKVVAPPGFKPECNLNDAMRFTVFNQYITRVFRRWSTLTREMCTMRSHLATLKIACTQPPLLGGMEVNLPKLYESVNNNGGIKNMNKKAWAKVAEELNCGKLSHPDRRLDQLYMKYVVPYNSLSKRERKEMVRKVDELWQKRHRRMLDRASNPLHTQKHTLGESDSSDDDGELEDERRFPHIVKQLKEAEECIVKGRPMDLLTFKRIANNVQKRYLPTRVTMDEIENSYWSSALMAEHHVCVHSASIETSSEGYGFTNNANEPYGQHPWNLKMLNQNNGNILRLLGSVVGLTIPTLHLGMLYSTSCWHRDPHGLPWMEYMHDGPPKIWYGIPDEESERFRKAVEILCPTSCQNKSIWLPSDITMIPPNFLLEHSVSLTRMLQNPGEFVIVFPKAYSCSIATGFTVSESVYFAYNHWINNIGQVFQELRDSCEPSMFSLEHLLISAAKDPRATLNVLQLVHASMSNIVSTELAHRAALVKHGLEPRFEERNNPTGIVWNISEEDECEICRANLYLSRVNGVFDRDGALCVGHALQVLDEREQNLQRRSQCHYDLVIYMTETELKQIVERISKIIVDVRMAQAFPRVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00780053; iTF_00781610; iTF_00780824; iTF_00782426;
- 90% Identity
- -
- 80% Identity
- -